RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ALKAL2Q6UX46 152 aa10.94□□□□□ -0.66
TSPAN3-208ENST00000560514 SDHAF1A6NFY7 115 aa10.93□□□□□ -0.66
TSPAN3-208ENST00000560514 I3L3M4 83 aa10.93□□□□□ -0.66
TSPAN3-208ENST00000560514 ZNF25P17030 456 aaPredicted RBP10.93□□□□□ -0.66
TSPAN3-208ENST00000560514 BORCS7Q96B45 105 aa10.93□□□□□ -0.66
TSPAN3-208ENST00000560514 IGHV1-58A0A0C4DH39 117 aa10.92□□□□□ -0.66
TSPAN3-208ENST00000560514 APCSP02743 223 aa10.92□□□□□ -0.66
TSPAN3-208ENST00000560514 PMCHP20382 165 aa10.92□□□□□ -0.66
TSPAN3-208ENST00000560514 TSKUQ8WUA8 353 aa10.92□□□□□ -0.66
TSPAN3-208ENST00000560514 RPL39LQ96EH5 51 aaKnown RBP10.92□□□□□ -0.66
TSPAN3-208ENST00000560514 LINC00526Q96FQ7 95 aa10.92□□□□□ -0.66
TSPAN3-208ENST00000560514 MUC2Q02817 5179 aa10.92□□□□□ -0.66
TSPAN3-208ENST00000560514 ZNF561-AS1K7EIQ3 104 aa10.91□□□□□ -0.66
TSPAN3-208ENST00000560514 FGF6P10767 208 aa10.91□□□□□ -0.66
TSPAN3-208ENST00000560514 FOXI1Q12951 378 aa10.91□□□□□ -0.66
TSPAN3-208ENST00000560514 GAGE2BQ13066 116 aa10.91□□□□□ -0.66
TSPAN3-208ENST00000560514 EIF5A2Q9GZV4 153 aaKnown RBP10.91□□□□□ -0.66
TSPAN3-208ENST00000560514 TMEM191AQ9H0A3 160 aa10.91□□□□□ -0.66
TSPAN3-208ENST00000560514 OSTCQ9NRP0 149 aa10.91□□□□□ -0.66
TSPAN3-208ENST00000560514 KRTAP9-6A0A140TA67 174 aa10.9□□□□□ -0.66
TSPAN3-208ENST00000560514 A0A1B0GUT8 65 aa10.9□□□□□ -0.66
TSPAN3-208ENST00000560514 XCL1P47992 114 aa10.9□□□□□ -0.66
TSPAN3-208ENST00000560514 PTTG1IPP53801 180 aa10.9□□□□□ -0.66
TSPAN3-208ENST00000560514 SYCNQ0VAF6 134 aa10.9□□□□□ -0.66
TSPAN3-208ENST00000560514 PRR4Q16378 134 aa10.9□□□□□ -0.66
TSPAN3-208ENST00000560514 LINC01551Q86U37 167 aa10.9□□□□□ -0.66
TSPAN3-208ENST00000560514 PRR26Q8N8Z3 221 aa10.9□□□□□ -0.66
TSPAN3-208ENST00000560514 SMIM7Q9BQ49 75 aa10.9□□□□□ -0.66
TSPAN3-208ENST00000560514 ST20Q9HBF5 79 aa10.9□□□□□ -0.66
TSPAN3-208ENST00000560514 LOC107984640A0A0U1RRK4 108 aa10.89□□□□□ -0.67
TSPAN3-208ENST00000560514 ESDP10768 282 aa10.89□□□□□ -0.67
TSPAN3-208ENST00000560514 C1orf137Q5JT78 98 aa10.89□□□□□ -0.67
TSPAN3-208ENST00000560514 OR5A1Q8NGJ0 315 aa10.89□□□□□ -0.67
TSPAN3-208ENST00000560514 TMEM101Q96IK0 257 aa10.89□□□□□ -0.67
TSPAN3-208ENST00000560514 BTF3L4Q96K17 158 aa10.89□□□□□ -0.67
TSPAN3-208ENST00000560514 HIGD1CA8MV81 97 aa10.88□□□□□ -0.67
TSPAN3-208ENST00000560514 CEBPGP53567 150 aa10.88□□□□□ -0.67
TSPAN3-208ENST00000560514 POLR2KP53803 58 aaKnown RBP10.88□□□□□ -0.67
TSPAN3-208ENST00000560514 DIRC1Q969H9 104 aa10.88□□□□□ -0.67
TSPAN3-208ENST00000560514 ISOC2Q96AB3 205 aa10.88□□□□□ -0.67
TSPAN3-208ENST00000560514 MRAP2Q96G30 205 aa10.88□□□□□ -0.67
TSPAN3-208ENST00000560514 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.87□□□□□ -0.67
TSPAN3-208ENST00000560514 TRBV27A0A0K0K1C4 114 aa10.87□□□□□ -0.67
TSPAN3-208ENST00000560514 IGKV2-29A2NJV5 120 aaPredicted RBP10.87□□□□□ -0.67
TSPAN3-208ENST00000560514 ZNF727A8MUV8 499 aa10.87□□□□□ -0.67
TSPAN3-208ENST00000560514 PPP1R17O96001 155 aa10.87□□□□□ -0.67
TSPAN3-208ENST00000560514 RAB4AP20338 218 aa10.87□□□□□ -0.67
TSPAN3-208ENST00000560514 CCL25O15444 150 aa10.86□□□□□ -0.67
TSPAN3-208ENST00000560514 SRP19P09132 144 aaKnown RBP10.86□□□□□ -0.67
TSPAN3-208ENST00000560514 FAM74A3Q4VXF1 159 aa10.86□□□□□ -0.67
TSPAN3-208ENST00000560514 MRPL52Q86TS9 123 aaKnown RBP10.86□□□□□ -0.67
TSPAN3-208ENST00000560514 CAMPP49913 170 aa10.85□□□□□ -0.67
TSPAN3-208ENST00000560514 RIGQ13278 110 aa10.85□□□□□ -0.67
TSPAN3-208ENST00000560514 LINC00959A0A1B0GUT2 108 aa10.84□□□□□ -0.67
TSPAN3-208ENST00000560514 A0A1W2PNN7 141 aa10.84□□□□□ -0.67
TSPAN3-208ENST00000560514 VCYO14598 125 aa10.84□□□□□ -0.67
TSPAN3-208ENST00000560514 TSHBP01222 138 aa10.84□□□□□ -0.67
TSPAN3-208ENST00000560514 SS18Q15532 418 aa10.84□□□□□ -0.67
TSPAN3-208ENST00000560514 TMEM241Q24JQ0 296 aa10.84□□□□□ -0.67
TSPAN3-208ENST00000560514 CDC42SE2Q9NRR3 84 aa10.84□□□□□ -0.67
TSPAN3-208ENST00000560514 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
TSPAN3-208ENST00000560514 SMAGPQ0VAQ4 97 aa10.83□□□□□ -0.68
TSPAN3-208ENST00000560514 C9orf116Q5BN46 136 aaPredicted RBP10.83□□□□□ -0.68
TSPAN3-208ENST00000560514 CSDC2Q9Y534 153 aaKnown RBP10.83□□□□□ -0.68
TSPAN3-208ENST00000560514 V9GYV3 84 aa10.83□□□□□ -0.68
TSPAN3-208ENST00000560514 NUP35Q8NFH5 326 aa10.82□□□□□ -0.68
TSPAN3-208ENST00000560514 IGLV1-50A0A075B6I6 118 aa10.81□□□□□ -0.68
TSPAN3-208ENST00000560514 IGLV7-43P04211 117 aa10.81□□□□□ -0.68
TSPAN3-208ENST00000560514 UBE2D1P51668 147 aa10.81□□□□□ -0.68
TSPAN3-208ENST00000560514 CD164L2Q6UWJ8 174 aa10.81□□□□□ -0.68
TSPAN3-208ENST00000560514 AMN1Q8IY45 258 aa10.81□□□□□ -0.68
TSPAN3-208ENST00000560514 TMEM242Q9NWH2 141 aa10.81□□□□□ -0.68
TSPAN3-208ENST00000560514 NAT8BQ9UHF3 227 aa10.81□□□□□ -0.68
TSPAN3-208ENST00000560514 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
TSPAN3-208ENST00000560514 C7orf77A4D0Y5 90 aa10.8□□□□□ -0.68
TSPAN3-208ENST00000560514 APOMO95445 188 aa10.8□□□□□ -0.68
TSPAN3-208ENST00000560514 MALP21145 153 aa10.8□□□□□ -0.68
TSPAN3-208ENST00000560514 RPL18AQ02543 176 aaKnown RBP10.8□□□□□ -0.68
TSPAN3-208ENST00000560514 PHF5AQ7RTV0 110 aaKnown RBP10.8□□□□□ -0.68
TSPAN3-208ENST00000560514 SMDT1Q9H4I9 107 aa10.8□□□□□ -0.68
TSPAN3-208ENST00000560514 LINC00862A6NCI5 91 aa10.79□□□□□ -0.68
TSPAN3-208ENST00000560514 H0Y9J4 135 aa10.79□□□□□ -0.68
TSPAN3-208ENST00000560514 PPP1R2P9O14990 202 aa10.79□□□□□ -0.68
TSPAN3-208ENST00000560514 CAMK2N2Q96S95 79 aa10.79□□□□□ -0.68
TSPAN3-208ENST00000560514 A0A1B0GW15 77 aa10.78□□□□□ -0.68
TSPAN3-208ENST00000560514 C1orf196B1AJZ1 125 aa10.78□□□□□ -0.68
TSPAN3-208ENST00000560514 SUMO2P61956 95 aaKnown RBP10.78□□□□□ -0.68
TSPAN3-208ENST00000560514 RPL23P62829 140 aaKnown RBP10.78□□□□□ -0.68
TSPAN3-208ENST00000560514 KIR2DL4Q99706 377 aa10.78□□□□□ -0.68
TSPAN3-208ENST00000560514 A0A087WZ39 114 aa10.77□□□□□ -0.69
TSPAN3-208ENST00000560514 SMIM27A0A1W2PRY6 76 aa10.77□□□□□ -0.69
TSPAN3-208ENST00000560514 TCAPO15273 167 aa10.77□□□□□ -0.69
TSPAN3-208ENST00000560514 FCER1GP30273 86 aa10.77□□□□□ -0.69
TSPAN3-208ENST00000560514 PEA15Q15121 130 aa10.77□□□□□ -0.69
TSPAN3-208ENST00000560514 FAM104BQ5XKR9 115 aa10.77□□□□□ -0.69
TSPAN3-208ENST00000560514 NRACQ8N912 160 aa10.77□□□□□ -0.69
TSPAN3-208ENST00000560514 C20orf78Q9BR46 151 aa10.77□□□□□ -0.69
TSPAN3-208ENST00000560514 NAT8Q9UHE5 227 aa10.77□□□□□ -0.69
TSPAN3-208ENST00000560514 FAT4Q6V0I7 4981 aa10.77□□□□□ -0.69
TSPAN3-208ENST00000560514 TRBV24-1A0A075B6N3 115 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms