RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SAA4P35542 130 aa4.27□□□□□ -1.73
SNRPA1-209ENST00000560307 SNRPD3P62318 126 aaKnown RBP4.27□□□□□ -1.73
SNRPA1-209ENST00000560307 Q5XG85 94 aa4.27□□□□□ -1.73
SNRPA1-209ENST00000560307 ZNF625Q96I27 306 aaPredicted RBP4.27□□□□□ -1.73
SNRPA1-209ENST00000560307 CDH23Q9H251 3354 aa4.27□□□□□ -1.73
SNRPA1-209ENST00000560307 TMEM89A2RUT3 159 aa4.26□□□□□ -1.73
SNRPA1-209ENST00000560307 K7EQG2 157 aa4.26□□□□□ -1.73
SNRPA1-209ENST00000560307 IGHG2P01859 326 aa4.26□□□□□ -1.73
SNRPA1-209ENST00000560307 LYPD5Q6UWN5 251 aa4.26□□□□□ -1.73
SNRPA1-209ENST00000560307 SOSTDC1Q6X4U4 206 aa4.26□□□□□ -1.73
SNRPA1-209ENST00000560307 PRR26Q8N8Z3 221 aa4.26□□□□□ -1.73
SNRPA1-209ENST00000560307 Q9H8V8 135 aa4.26□□□□□ -1.73
SNRPA1-209ENST00000560307 CDKN2A-AS1Q9UH64 79 aa4.26□□□□□ -1.73
SNRPA1-209ENST00000560307 SERP1Q9Y6X1 66 aa4.26□□□□□ -1.73
SNRPA1-209ENST00000560307 USP34Q70CQ2 3546 aa4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 TRAV12-2A0A075B6T6 113 aa4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 SMIM1B2RUZ4 78 aa4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 JMJD7-PLA2G4BH0Y9G9 81 aa4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 IGHV3-53P01767 116 aa4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 ATP5EP56381 51 aaPredicted RBP4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 NPC2P61916 151 aa4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 Q8N2B8 174 aa4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 FAM218AQ96MZ4 157 aa4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 LINC00167Q96N53 147 aa4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 ABCA1O95477 2261 aa4.25□□□□□ -1.73
SNRPA1-209ENST00000560307 IGLV5-52A0A0A0MRZ9 124 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 FAM236DA0A1B0GTK5 79 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 OXTP01178 125 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 TRBV12-3P01733 135 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 CCKP06307 115 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 FAM236CP0DP71 79 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 DEFB1P60022 68 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 KRTAP10-11P60412 298 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 KLRB1Q12918 225 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 LINC01561Q8N1V8 128 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
SNRPA1-209ENST00000560307 IGHV3OR16-12A0A075B7B8 117 aa4.23□□□□□ -1.73
SNRPA1-209ENST00000560307 RBMY1BA6NDE4 496 aaKnown RBP4.23□□□□□ -1.73
SNRPA1-209ENST00000560307 RBMY1EA6NEQ0 496 aaKnown RBP4.23□□□□□ -1.73
SNRPA1-209ENST00000560307 RS1O15537 224 aa4.23□□□□□ -1.73
SNRPA1-209ENST00000560307 RBMY1DP0C7P1 496 aaKnown RBP4.23□□□□□ -1.73
SNRPA1-209ENST00000560307 RBMY1A1P0DJD3 496 aaKnown RBP4.23□□□□□ -1.73
SNRPA1-209ENST00000560307 RBMY1CP0DJD4 496 aa4.23□□□□□ -1.73
SNRPA1-209ENST00000560307 RBMY1FQ15415 496 aaKnown RBP4.23□□□□□ -1.73
SNRPA1-209ENST00000560307 LINC00242Q5T6M2 205 aa4.23□□□□□ -1.73
SNRPA1-209ENST00000560307 LINC00846Q9NV44 126 aa4.23□□□□□ -1.73
SNRPA1-209ENST00000560307 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 TRAV7A0A075B6U4 112 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 IGKV3D-7A0A0C4DH55 119 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 TRBV10-1A0A0K0K1A3 114 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 IGKV2-29A2NJV5 120 aaPredicted RBP4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 A6NDX4 124 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 NDUFC1O43677 76 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 LY6G6DO95868 133 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 DEFB124Q8NES8 71 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 DEFB104AQ8WTQ1 72 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 DSCR8Q96T75 97 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 CYSTM1Q9H1C7 97 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 ORMDL1Q9P0S3 153 aa4.22□□□□□ -1.73
SNRPA1-209ENST00000560307 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 SMIM26A0A096LP01 95 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 IBA57-AS1B1ANH7 110 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 H3BQ85 93 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 PFN2P35080 140 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 LMO4P61968 165 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 COX6A2Q02221 97 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 KLKP1Q107X0 134 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 C4orf26Q17RF5 130 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 SPINK13Q1W4C9 94 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 RNASE13Q5GAN3 156 aaKnown RBP4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 HRCT1Q6UXD1 115 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 LINC01560Q8TB33 94 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 SMIM11BQ8TCY0 68 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 RPL36ALQ969Q0 106 aaKnown RBP4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 TMEM243Q9BU79 118 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 SND1-IT1Q9HBX3 110 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 C14orf132Q9NPU4 83 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 ICE1Q9Y2F5 2266 aa4.21□□□□□ -1.74
SNRPA1-209ENST00000560307 IGKV2-28A0A075B6P5 120 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 A0A087WYN8 130 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 F8WDY8 70 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 IGKV2D-28P01615 120 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 XCL1P47992 114 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 LINC00337Q8N6G1 96 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 COX7B2Q8TF08 81 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 UBL5Q9BZL1 73 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 Q9HAA7 133 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 XCL2Q9UBD3 114 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 COL6A3P12111 3177 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 TRIOO75962 3097 aa4.2□□□□□ -1.74
SNRPA1-209ENST00000560307 CFAP54Q96N23 3096 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 IGKV3-7A0A075B6H7 116 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 A0A087WVE0 104 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 KNCNA6PVL3 124 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 TMEM256-PLSCR3K7ERE1 68 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 CCL24O00175 119 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 LY6HO94772 140 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 IGHV3-11P01762 117 aa4.19□□□□□ -1.74
SNRPA1-209ENST00000560307 RPL36AP83881 106 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms