RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 SPANXB1Q9NS25 103 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-212ENST00000559974 TRBV10-1A0A0K0K1A3 114 aa10.35□□□□□ -0.75
RABGGTA-212ENST00000559974 K7EQD1 137 aa10.35□□□□□ -0.75
RABGGTA-212ENST00000559974 RNASE13Q5GAN3 156 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-212ENST00000559974 CSNK1G2-AS1Q8NCQ2 148 aa10.35□□□□□ -0.75
RABGGTA-212ENST00000559974 PLAC8L1A1L4L8 177 aa10.35□□□□□ -0.75
RABGGTA-212ENST00000559974 PF4P02776 101 aa10.35□□□□□ -0.75
RABGGTA-212ENST00000559974 SLC25A29Q8N8R3 303 aa10.35□□□□□ -0.75
RABGGTA-212ENST00000559974 RPL36AP83881 106 aaKnown RBP10.34□□□□□ -0.75
RABGGTA-212ENST00000559974 Q6ZUT4 128 aa10.34□□□□□ -0.75
RABGGTA-212ENST00000559974 LINC00482Q8N8I6 264 aa10.34□□□□□ -0.75
RABGGTA-212ENST00000559974 RPL36ALQ969Q0 106 aaKnown RBP10.34□□□□□ -0.75
RABGGTA-212ENST00000559974 IGHV3-64A0A075B6Q5 118 aa10.34□□□□□ -0.75
RABGGTA-212ENST00000559974 TINCRA0A1B0GVN0 87 aa10.33□□□□□ -0.76
RABGGTA-212ENST00000559974 UBE2D1P51668 147 aa10.33□□□□□ -0.76
RABGGTA-212ENST00000559974 RRN3P1Q2M238 152 aa10.33□□□□□ -0.76
RABGGTA-212ENST00000559974 TIMM21Q9BVV7 248 aa10.33□□□□□ -0.76
RABGGTA-212ENST00000559974 IGHV3-30P01768 117 aa10.32□□□□□ -0.76
RABGGTA-212ENST00000559974 IGHV3-30-5P0DP03 117 aa10.32□□□□□ -0.76
RABGGTA-212ENST00000559974 DAZ4Q86SG3 579 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-212ENST00000559974 DAZ3Q9NR90 486 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-212ENST00000559974 IGHV3-30-3P0DP02 117 aa10.32□□□□□ -0.76
RABGGTA-212ENST00000559974 OVOL2Q9BRP0 275 aa10.32□□□□□ -0.76
RABGGTA-212ENST00000559974 UBE2D3P61077 147 aa10.31□□□□□ -0.76
RABGGTA-212ENST00000559974 UBE2D2P62837 147 aa10.31□□□□□ -0.76
RABGGTA-212ENST00000559974 TRGV2A0A075B6R0 118 aa10.3□□□□□ -0.76
RABGGTA-212ENST00000559974 GAGE7O76087 117 aa10.3□□□□□ -0.76
RABGGTA-212ENST00000559974 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
RABGGTA-212ENST00000559974 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
RABGGTA-212ENST00000559974 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
RABGGTA-212ENST00000559974 OCIAD2Q56VL3 154 aa10.3□□□□□ -0.76
RABGGTA-212ENST00000559974 DGAT2L7PQ6IED9 249 aa10.3□□□□□ -0.76
RABGGTA-212ENST00000559974 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
RABGGTA-212ENST00000559974 CIDEAO60543 219 aa10.3□□□□□ -0.76
RABGGTA-212ENST00000559974 SHISA2Q6UWI4 295 aa10.3□□□□□ -0.76
RABGGTA-212ENST00000559974 TRAV8-3A0A0A6YYJ7 113 aa10.29□□□□□ -0.76
RABGGTA-212ENST00000559974 GAGE12JA6NER3 117 aa10.29□□□□□ -0.76
RABGGTA-212ENST00000559974 GAGE4Q13068 117 aa10.29□□□□□ -0.76
RABGGTA-212ENST00000559974 GAGE5Q13069 117 aa10.29□□□□□ -0.76
RABGGTA-212ENST00000559974 GAGE13Q4V321 117 aa10.29□□□□□ -0.76
RABGGTA-212ENST00000559974 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
RABGGTA-212ENST00000559974 PGPEP1Q9NXJ5 209 aa10.29□□□□□ -0.76
RABGGTA-212ENST00000559974 RBX1P62877 108 aa10.28□□□□□ -0.76
RABGGTA-212ENST00000559974 NTM-AS1Q6ZSK4 140 aa10.28□□□□□ -0.76
RABGGTA-212ENST00000559974 GEMIN7Q9H840 131 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-212ENST00000559974 VSIG2Q96IQ7 327 aa10.28□□□□□ -0.76
RABGGTA-212ENST00000559974 A0A0J9YXY3 114 aa10.27□□□□□ -0.77
RABGGTA-212ENST00000559974 TRBV6-4A0A1B0GX49 114 aa10.27□□□□□ -0.77
RABGGTA-212ENST00000559974 TMEM238C9JI98 176 aa10.27□□□□□ -0.77
RABGGTA-212ENST00000559974 APOMO95445 188 aa10.27□□□□□ -0.77
RABGGTA-212ENST00000559974 LINC00694P0DN24 101 aa10.27□□□□□ -0.77
RABGGTA-212ENST00000559974 TIRAPP58753 221 aa10.27□□□□□ -0.77
RABGGTA-212ENST00000559974 SBSPONQ8IVN8 264 aa10.27□□□□□ -0.77
RABGGTA-212ENST00000559974 CSDC2Q9Y534 153 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-212ENST00000559974 IGLV5-45A0A087WSX0 123 aa10.26□□□□□ -0.77
RABGGTA-212ENST00000559974 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
RABGGTA-212ENST00000559974 INSL3P51460 131 aa10.26□□□□□ -0.77
RABGGTA-212ENST00000559974 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
RABGGTA-212ENST00000559974 NBEAL1Q6ZS30 2694 aa10.26□□□□□ -0.77
RABGGTA-212ENST00000559974 DNAH3Q8TD57 4116 aa10.25□□□□□ -0.77
RABGGTA-212ENST00000559974 TRGV4A0A0C4DH28 118 aa10.25□□□□□ -0.77
RABGGTA-212ENST00000559974 TSPAN13O95857 204 aa10.25□□□□□ -0.77
RABGGTA-212ENST00000559974 CFC1BP0CG36 223 aa10.25□□□□□ -0.77
RABGGTA-212ENST00000559974 CFC1P0CG37 223 aa10.25□□□□□ -0.77
RABGGTA-212ENST00000559974 SMAGPQ0VAQ4 97 aa10.25□□□□□ -0.77
RABGGTA-212ENST00000559974 K7ERU9 68 aa10.25□□□□□ -0.77
RABGGTA-212ENST00000559974 CDKN2A-AS1Q9UH64 79 aa10.25□□□□□ -0.77
RABGGTA-212ENST00000559974 NDUFA12Q9UI09 145 aa10.25□□□□□ -0.77
RABGGTA-212ENST00000559974 NOTCH1P46531 2555 aa10.24□□□□□ -0.77
RABGGTA-212ENST00000559974 MGAM2Q2M2H8 2515 aa10.24□□□□□ -0.77
RABGGTA-212ENST00000559974 LOC100131303A0A0U1RQF7 123 aa10.24□□□□□ -0.77
RABGGTA-212ENST00000559974 C9orf66Q5T8R8 295 aa10.24□□□□□ -0.77
RABGGTA-212ENST00000559974 FAM19A3Q7Z5A8 133 aa10.24□□□□□ -0.77
RABGGTA-212ENST00000559974 CBY1Q9Y3M2 126 aa10.24□□□□□ -0.77
RABGGTA-212ENST00000559974 H3BMG7 143 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 HERVK_113P63121 156 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 RPL24P83731 157 aaKnown RBP10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 FHL2Q14192 279 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 ZFAND6Q6FIF0 208 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 TMEM243Q9BU79 118 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 A4D1N5 150 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 A8MZ25 164 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 RNF151Q2KHN1 245 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 LINC00242Q5T6M2 205 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 LITAFQ99732 161 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 CDC42SE2Q9NRR3 84 aa10.23□□□□□ -0.77
RABGGTA-212ENST00000559974 F8W1H4 67 aa10.22□□□□□ -0.77
RABGGTA-212ENST00000559974 UBE2L6O14933 153 aa10.22□□□□□ -0.77
RABGGTA-212ENST00000559974 COX6A2Q02221 97 aa10.22□□□□□ -0.77
RABGGTA-212ENST00000559974 PRO1854Q9UHT4 67 aa10.22□□□□□ -0.77
RABGGTA-212ENST00000559974 KRTAP21-3Q3LHN1 58 aa10.21□□□□□ -0.77
RABGGTA-212ENST00000559974 KIR2DL5BQ8NHK3 375 aa10.21□□□□□ -0.77
RABGGTA-212ENST00000559974 H7C423 109 aa10.21□□□□□ -0.78
RABGGTA-212ENST00000559974 TMEM101Q96IK0 257 aa10.21□□□□□ -0.78
RABGGTA-212ENST00000559974 A0A0B4J2C4 111 aa10.2□□□□□ -0.78
RABGGTA-212ENST00000559974 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
RABGGTA-212ENST00000559974 OXLD1Q5BKU9 147 aa10.2□□□□□ -0.78
RABGGTA-212ENST00000559974 LYRM7Q5U5X0 104 aa10.2□□□□□ -0.78
RABGGTA-212ENST00000559974 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms