RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 ZNF25P17030 456 aaPredicted RBP8.33□□□□□ -1.08
GABPB1-208ENST00000558970 AP5S1Q9NUS5 200 aa8.33□□□□□ -1.08
GABPB1-208ENST00000558970 CYSLTR1Q9Y271 337 aa8.33□□□□□ -1.08
GABPB1-208ENST00000558970 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
GABPB1-208ENST00000558970 SMAGPQ0VAQ4 97 aa8.32□□□□□ -1.08
GABPB1-208ENST00000558970 MRPL52Q86TS9 123 aaKnown RBP8.32□□□□□ -1.08
GABPB1-208ENST00000558970 ZNF664Q8N3J9 261 aa8.32□□□□□ -1.08
GABPB1-208ENST00000558970 C1orf43Q9BWL3 253 aa8.32□□□□□ -1.08
GABPB1-208ENST00000558970 K7EMI3 77 aa8.31□□□□□ -1.08
GABPB1-208ENST00000558970 RAB5BP61020 215 aa8.31□□□□□ -1.08
GABPB1-208ENST00000558970 Q0VG73 95 aa8.31□□□□□ -1.08
GABPB1-208ENST00000558970 ZC2HC1BQ5TFG8 222 aa8.31□□□□□ -1.08
GABPB1-208ENST00000558970 CDC42SE2Q9NRR3 84 aa8.31□□□□□ -1.08
GABPB1-208ENST00000558970 SPANXA1Q9NS26 97 aa8.31□□□□□ -1.08
GABPB1-208ENST00000558970 TNP2Q05952 138 aa8.3□□□□□ -1.08
GABPB1-208ENST00000558970 MIAQ16674 131 aa8.3□□□□□ -1.08
GABPB1-208ENST00000558970 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
GABPB1-208ENST00000558970 NFE4Q86UQ8 179 aa8.3□□□□□ -1.08
GABPB1-208ENST00000558970 TOMM6Q96B49 74 aa8.3□□□□□ -1.08
GABPB1-208ENST00000558970 PRR34Q9NV39 138 aa8.3□□□□□ -1.08
GABPB1-208ENST00000558970 TMA7Q9Y2S6 64 aaKnown RBP8.3□□□□□ -1.08
GABPB1-208ENST00000558970 RYR1P21817 5038 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 PCLOQ9Y6V0 5065 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 IGLV4-3A0A075B6K6 122 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 TRAV13-1A0A0B4J241 112 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 LINC01546A6NGU7 62 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 PRSS29PA6NIE9 313 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 LECT2O14960 151 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST1H2BKO60814 126 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 SERF1AO75920 110 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST1H2BJP06899 126 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST1H2BOP23527 126 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST1H2BBP33778 126 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST1H2BDP58876 126 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST1H2BCP62807 126 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST2H2BEQ16778 126 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.29□□□□□ -1.08
GABPB1-208ENST00000558970 FAM19A2Q8N3H0 131 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST1H2BHQ93079 126 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 RMI2Q96E14 147 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 SCGB3A1Q96QR1 104 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST1H2BNQ99877 126 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 HIST1H2BMQ99879 126 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 TIMM21Q9BVV7 248 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 DNAH17Q9UFH2 4485 aa8.29□□□□□ -1.08
GABPB1-208ENST00000558970 A0A096LNJ9 63 aa8.28□□□□□ -1.08
GABPB1-208ENST00000558970 IFITM10A6NMD0 228 aa8.28□□□□□ -1.08
GABPB1-208ENST00000558970 C1orf196B1AJZ1 125 aa8.28□□□□□ -1.08
GABPB1-208ENST00000558970 HSBP1O75506 76 aa8.28□□□□□ -1.08
GABPB1-208ENST00000558970 HBDP02042 147 aa8.28□□□□□ -1.08
GABPB1-208ENST00000558970 XCL1P47992 114 aa8.28□□□□□ -1.08
GABPB1-208ENST00000558970 LINC00310P59036 64 aa8.28□□□□□ -1.08
GABPB1-208ENST00000558970 FAM104AQ969W3 186 aa8.28□□□□□ -1.08
GABPB1-208ENST00000558970 TMEM141Q96I45 108 aa8.28□□□□□ -1.08
GABPB1-208ENST00000558970 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
GABPB1-208ENST00000558970 LINC00959A0A1B0GUT2 108 aa8.27□□□□□ -1.09
GABPB1-208ENST00000558970 CCL25O15444 150 aa8.27□□□□□ -1.09
GABPB1-208ENST00000558970 NUPR1O60356 82 aa8.27□□□□□ -1.09
GABPB1-208ENST00000558970 G0S2P27469 103 aa8.27□□□□□ -1.09
GABPB1-208ENST00000558970 Q6ZN92 141 aa8.27□□□□□ -1.09
GABPB1-208ENST00000558970 TEX43Q6ZNM6 134 aa8.27□□□□□ -1.09
GABPB1-208ENST00000558970 BAALCQ8WXS3 180 aa8.27□□□□□ -1.09
GABPB1-208ENST00000558970 CHCHD10Q8WYQ3 142 aaPredicted RBP8.27□□□□□ -1.09
GABPB1-208ENST00000558970 CHCHD1Q96BP2 118 aaKnown RBP8.27□□□□□ -1.09
GABPB1-208ENST00000558970 TM2D2Q9BX73 214 aa8.27□□□□□ -1.09
GABPB1-208ENST00000558970 GAGE12HA6NDE8 117 aa8.26□□□□□ -1.09
GABPB1-208ENST00000558970 IGIPA6NJ69 53 aa8.26□□□□□ -1.09
GABPB1-208ENST00000558970 MRPS36P82909 103 aaKnown RBP8.26□□□□□ -1.09
GABPB1-208ENST00000558970 SS18Q15532 418 aa8.26□□□□□ -1.09
GABPB1-208ENST00000558970 MAPKAPK5-AS1Q8N8E1 139 aa8.26□□□□□ -1.09
GABPB1-208ENST00000558970 PYGO1Q9Y3Y4 419 aa8.26□□□□□ -1.09
GABPB1-208ENST00000558970 TRAV8-4A0A0B4J246 113 aa8.25□□□□□ -1.09
GABPB1-208ENST00000558970 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
GABPB1-208ENST00000558970 NDUFA6P56556 154 aa8.25□□□□□ -1.09
GABPB1-208ENST00000558970 WFDC2Q14508 124 aa8.25□□□□□ -1.09
GABPB1-208ENST00000558970 ERASQ7Z444 233 aa8.25□□□□□ -1.09
GABPB1-208ENST00000558970 VCX2Q9H322 139 aa8.25□□□□□ -1.09
GABPB1-208ENST00000558970 FAT2Q9NYQ8 4349 aa8.24□□□□□ -1.09
GABPB1-208ENST00000558970 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.24□□□□□ -1.09
GABPB1-208ENST00000558970 LINC00336Q6ZUF6 198 aa8.24□□□□□ -1.09
GABPB1-208ENST00000558970 LINC00173Q6ZV60 143 aa8.24□□□□□ -1.09
GABPB1-208ENST00000558970 TIMM17AQ99595 171 aa8.24□□□□□ -1.09
GABPB1-208ENST00000558970 C2orf88Q9BSF0 95 aa8.24□□□□□ -1.09
GABPB1-208ENST00000558970 COX11Q9Y6N1 276 aa8.24□□□□□ -1.09
GABPB1-208ENST00000558970 KIAA1109Q2LD37 5005 aa8.24□□□□□ -1.09
GABPB1-208ENST00000558970 LOC105371267A0A1B0GV96 52 aa8.23□□□□□ -1.09
GABPB1-208ENST00000558970 FABP4P15090 132 aa8.23□□□□□ -1.09
GABPB1-208ENST00000558970 KRTAP26-1Q6PEX3 210 aa8.23□□□□□ -1.09
GABPB1-208ENST00000558970 HECTD4Q9Y4D8 3996 aa8.22□□□□□ -1.09
GABPB1-208ENST00000558970 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-208ENST00000558970 A0A087WTM6 91 aa8.22□□□□□ -1.09
GABPB1-208ENST00000558970 H0Y8G0 127 aa8.22□□□□□ -1.09
GABPB1-208ENST00000558970 PDZD11Q5EBL8 140 aa8.22□□□□□ -1.09
GABPB1-208ENST00000558970 AMELXQ99217 191 aa8.22□□□□□ -1.09
GABPB1-208ENST00000558970 PKD1P98161 4303 aa8.21□□□□□ -1.09
GABPB1-208ENST00000558970 LRCOL1A6NCL2 159 aa8.21□□□□□ -1.1
GABPB1-208ENST00000558970 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
GABPB1-208ENST00000558970 USP17L23D6RBM5 183 aa8.21□□□□□ -1.1
GABPB1-208ENST00000558970 FOXI1Q12951 378 aa8.21□□□□□ -1.1
GABPB1-208ENST00000558970 PAPPA-AS1Q5QFB9 102 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms