RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 TRBV20OR9-2A0A075B6H5 130 aa7.48□□□□□ -1.21
SNX6-209ENST00000557265 IGLV4-69A0A075B6H9 119 aa7.48□□□□□ -1.21
SNX6-209ENST00000557265 EIF5AP63241 154 aaKnown RBP7.48□□□□□ -1.21
SNX6-209ENST00000557265 EIF5AL1Q6IS14 154 aaKnown RBP7.48□□□□□ -1.21
SNX6-209ENST00000557265 TEX261Q6UWH6 196 aa7.48□□□□□ -1.21
SNX6-209ENST00000557265 CDC42SE2Q9NRR3 84 aa7.48□□□□□ -1.21
SNX6-209ENST00000557265 APOMO95445 188 aa7.47□□□□□ -1.21
SNX6-209ENST00000557265 ESDP10768 282 aa7.47□□□□□ -1.21
SNX6-209ENST00000557265 ZNF345Q14585 488 aa7.47□□□□□ -1.21
SNX6-209ENST00000557265 PHF5AQ7RTV0 110 aaKnown RBP7.47□□□□□ -1.21
SNX6-209ENST00000557265 SMIM15Q7Z3B0 74 aa7.47□□□□□ -1.21
SNX6-209ENST00000557265 NUP35Q8NFH5 326 aa7.47□□□□□ -1.21
SNX6-209ENST00000557265 CAMK2N2Q96S95 79 aa7.47□□□□□ -1.21
SNX6-209ENST00000557265 MED9Q9NWA0 146 aa7.47□□□□□ -1.21
SNX6-209ENST00000557265 TRAV1-1A0A0B4J248 108 aa7.46□□□□□ -1.22
SNX6-209ENST00000557265 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.46□□□□□ -1.22
SNX6-209ENST00000557265 PDE6DO43924 150 aa7.46□□□□□ -1.22
SNX6-209ENST00000557265 TSHBP01222 138 aa7.46□□□□□ -1.22
SNX6-209ENST00000557265 MALP21145 153 aa7.46□□□□□ -1.22
SNX6-209ENST00000557265 MEF2BQ02080 365 aaPredicted RBP7.46□□□□□ -1.22
SNX6-209ENST00000557265 DIRC1Q969H9 104 aa7.46□□□□□ -1.22
SNX6-209ENST00000557265 MRAP2Q96G30 205 aa7.46□□□□□ -1.22
SNX6-209ENST00000557265 RPP21Q9H633 154 aaKnown RBP7.46□□□□□ -1.22
SNX6-209ENST00000557265 TRBV6-5A0A0K0K1A5 114 aa7.45□□□□□ -1.22
SNX6-209ENST00000557265 KANTRA0A1W2PQU2 76 aa7.45□□□□□ -1.22
SNX6-209ENST00000557265 BCL2L11O43521 198 aa7.45□□□□□ -1.22
SNX6-209ENST00000557265 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
SNX6-209ENST00000557265 RPL18AQ02543 176 aaKnown RBP7.45□□□□□ -1.22
SNX6-209ENST00000557265 MRPL52Q86TS9 123 aaKnown RBP7.45□□□□□ -1.22
SNX6-209ENST00000557265 RNASE7Q9H1E1 156 aaKnown RBP7.45□□□□□ -1.22
SNX6-209ENST00000557265 TMEM242Q9NWH2 141 aa7.45□□□□□ -1.22
SNX6-209ENST00000557265 COX7A2LO14548 114 aa7.44□□□□□ -1.22
SNX6-209ENST00000557265 PRR4Q16378 134 aa7.44□□□□□ -1.22
SNX6-209ENST00000557265 RGS21Q2M5E4 152 aa7.44□□□□□ -1.22
SNX6-209ENST00000557265 OPRPNQ99935 248 aaPredicted RBP7.44□□□□□ -1.22
SNX6-209ENST00000557265 A0A087WZ39 114 aa7.43□□□□□ -1.22
SNX6-209ENST00000557265 HMSDA8MTL9 139 aa7.43□□□□□ -1.22
SNX6-209ENST00000557265 C1orf196B1AJZ1 125 aa7.43□□□□□ -1.22
SNX6-209ENST00000557265 H0Y9J4 135 aa7.43□□□□□ -1.22
SNX6-209ENST00000557265 K7EN84 100 aa7.43□□□□□ -1.22
SNX6-209ENST00000557265 C2orf48Q96LS8 159 aa7.43□□□□□ -1.22
SNX6-209ENST00000557265 ST20Q9HBF5 79 aa7.43□□□□□ -1.22
SNX6-209ENST00000557265 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
SNX6-209ENST00000557265 TEX46H3BTG2 121 aa7.42□□□□□ -1.22
SNX6-209ENST00000557265 FAM210AQ96ND0 272 aa7.42□□□□□ -1.22
SNX6-209ENST00000557265 IGLV1-50A0A075B6I6 118 aa7.41□□□□□ -1.22
SNX6-209ENST00000557265 C7orf77A4D0Y5 90 aa7.41□□□□□ -1.22
SNX6-209ENST00000557265 RNASE13Q5GAN3 156 aaKnown RBP7.41□□□□□ -1.22
SNX6-209ENST00000557265 C5orf38Q86SI9 138 aa7.41□□□□□ -1.22
SNX6-209ENST00000557265 KRTAP11-1Q8IUC1 163 aa7.41□□□□□ -1.22
SNX6-209ENST00000557265 OCC1Q8TAD7 63 aa7.41□□□□□ -1.22
SNX6-209ENST00000557265 FAT4Q6V0I7 4981 aa7.4□□□□□ -1.22
SNX6-209ENST00000557265 TRAV13-1A0A0B4J241 112 aa7.4□□□□□ -1.22
SNX6-209ENST00000557265 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.22
SNX6-209ENST00000557265 POLR2KP53803 58 aaKnown RBP7.4□□□□□ -1.22
SNX6-209ENST00000557265 SPAG11BQ08648 103 aa7.4□□□□□ -1.22
SNX6-209ENST00000557265 RNF151Q2KHN1 245 aa7.4□□□□□ -1.22
SNX6-209ENST00000557265 TRBV27A0A0K0K1C4 114 aa7.39□□□□□ -1.23
SNX6-209ENST00000557265 FAM168BA1KXE4 195 aa7.39□□□□□ -1.23
SNX6-209ENST00000557265 UBE2D1P51668 147 aa7.39□□□□□ -1.23
SNX6-209ENST00000557265 TSKUQ8WUA8 353 aa7.39□□□□□ -1.23
SNX6-209ENST00000557265 GATCO43716 136 aaKnown RBP7.38□□□□□ -1.23
SNX6-209ENST00000557265 FCER1GP30273 86 aa7.38□□□□□ -1.23
SNX6-209ENST00000557265 CSDC2Q9Y534 153 aaKnown RBP7.38□□□□□ -1.23
SNX6-209ENST00000557265 A8MWL6 223 aa7.37□□□□□ -1.23
SNX6-209ENST00000557265 VCYO14598 125 aa7.37□□□□□ -1.23
SNX6-209ENST00000557265 FAM19A5Q7Z5A7 132 aaPredicted RBP7.37□□□□□ -1.23
SNX6-209ENST00000557265 BORCS7Q96B45 105 aa7.37□□□□□ -1.23
SNX6-209ENST00000557265 IMMP2LQ96T52 175 aa7.37□□□□□ -1.23
SNX6-209ENST00000557265 MRPL35Q9NZE8 188 aaKnown RBP7.37□□□□□ -1.23
SNX6-209ENST00000557265 UBE2D4Q9Y2X8 147 aa7.37□□□□□ -1.23
SNX6-209ENST00000557265 RAB4AP20338 218 aa7.36□□□□□ -1.23
SNX6-209ENST00000557265 RPL13AP40429 203 aaKnown RBP7.36□□□□□ -1.23
SNX6-209ENST00000557265 SMAGPQ0VAQ4 97 aa7.36□□□□□ -1.23
SNX6-209ENST00000557265 Q6ZUT4 128 aa7.36□□□□□ -1.23
SNX6-209ENST00000557265 OR10D4PQ8NGN7 298 aa7.36□□□□□ -1.23
SNX6-209ENST00000557265 TMEM191AQ9H0A3 160 aa7.36□□□□□ -1.23
SNX6-209ENST00000557265 SMKR1H3BMG3 65 aa7.35□□□□□ -1.23
SNX6-209ENST00000557265 C10orf25Q5T742 122 aa7.35□□□□□ -1.23
SNX6-209ENST00000557265 AMN1Q8IY45 258 aa7.35□□□□□ -1.23
SNX6-209ENST00000557265 ORAOV1Q8WV07 137 aa7.35□□□□□ -1.23
SNX6-209ENST00000557265 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
SNX6-209ENST00000557265 TAGLN2P37802 199 aaKnown RBP7.34□□□□□ -1.23
SNX6-209ENST00000557265 UBE2BP63146 152 aa7.34□□□□□ -1.23
SNX6-209ENST00000557265 GAGE2EQ4V326 116 aa7.34□□□□□ -1.23
SNX6-209ENST00000557265 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
SNX6-209ENST00000557265 UNQ6190/PRO20217Q6UXQ8 127 aa7.34□□□□□ -1.23
SNX6-209ENST00000557265 FAM231DQ6ZW35 169 aa7.34□□□□□ -1.23
SNX6-209ENST00000557265 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
SNX6-209ENST00000557265 GAGE2DQ9UEU5 116 aa7.34□□□□□ -1.23
SNX6-209ENST00000557265 A0A1B0GUT8 65 aa7.33□□□□□ -1.24
SNX6-209ENST00000557265 F8WDY8 70 aa7.33□□□□□ -1.24
SNX6-209ENST00000557265 NDUFA1O15239 70 aa7.33□□□□□ -1.24
SNX6-209ENST00000557265 TSPAN13O95857 204 aa7.33□□□□□ -1.24
SNX6-209ENST00000557265 TLX1NBP0CAT3 122 aa7.33□□□□□ -1.24
SNX6-209ENST00000557265 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
SNX6-209ENST00000557265 CT83Q5H943 113 aa7.33□□□□□ -1.24
SNX6-209ENST00000557265 KIR2DL4Q99706 377 aa7.33□□□□□ -1.24
SNX6-209ENST00000557265 HIGD1CA8MV81 97 aa7.32□□□□□ -1.24
SNX6-209ENST00000557265 M0QXV9 152 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms