RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 TRGV2A0A075B6R0 118 aa13.79□□□□□ -0.2
FOXN3-214ENST00000557258 PYGO1Q9Y3Y4 419 aa13.79□□□□□ -0.2
FOXN3-214ENST00000557258 DGAT2L7PQ6IED9 249 aa13.79□□□□□ -0.2
FOXN3-214ENST00000557258 A0A1B0GWB2 263 aa13.78□□□□□ -0.2
FOXN3-214ENST00000557258 TSPAN13O95857 204 aa13.78□□□□□ -0.2
FOXN3-214ENST00000557258 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.78□□□□□ -0.2
FOXN3-214ENST00000557258 IL17DQ8TAD2 202 aa13.78□□□□□ -0.2
FOXN3-214ENST00000557258 FLNBO75369 2602 aaKnown RBP13.78□□□□□ -0.2
FOXN3-214ENST00000557258 MRPS36P82909 103 aaKnown RBP13.78□□□□□ -0.2
FOXN3-214ENST00000557258 INAFM1C9JVW0 142 aa13.77□□□□□ -0.2
FOXN3-214ENST00000557258 CFC1BP0CG36 223 aa13.77□□□□□ -0.2
FOXN3-214ENST00000557258 CFC1P0CG37 223 aa13.77□□□□□ -0.2
FOXN3-214ENST00000557258 UBE2D1P51668 147 aa13.77□□□□□ -0.2
FOXN3-214ENST00000557258 TMEM238LA0A1B0GVL6 79 aa13.77□□□□□ -0.21
FOXN3-214ENST00000557258 A6NJY4 79 aa13.77□□□□□ -0.21
FOXN3-214ENST00000557258 PF4P02776 101 aa13.77□□□□□ -0.21
FOXN3-214ENST00000557258 PIK3CD-AS1Q5SR53 167 aa13.77□□□□□ -0.21
FOXN3-214ENST00000557258 PLAC8L1A1L4L8 177 aa13.77□□□□□ -0.21
FOXN3-214ENST00000557258 NTM-AS1Q6ZSK4 140 aa13.77□□□□□ -0.21
FOXN3-214ENST00000557258 SH2D6Q7Z4S9 175 aa13.77□□□□□ -0.21
FOXN3-214ENST00000557258 NDUFA11Q86Y39 141 aa13.77□□□□□ -0.21
FOXN3-214ENST00000557258 CDKN2A-AS1Q9UH64 79 aa13.77□□□□□ -0.21
FOXN3-214ENST00000557258 K7EQD1 137 aa13.76□□□□□ -0.21
FOXN3-214ENST00000557258 COX6A2Q02221 97 aa13.76□□□□□ -0.21
FOXN3-214ENST00000557258 TRAV13-1A0A0B4J241 112 aa13.76□□□□□ -0.21
FOXN3-214ENST00000557258 TEX48A0A1B0GUV7 120 aa13.76□□□□□ -0.21
FOXN3-214ENST00000557258 A4D1N5 150 aa13.76□□□□□ -0.21
FOXN3-214ENST00000557258 GEMIN7Q9H840 131 aaKnown RBP13.76□□□□□ -0.21
FOXN3-214ENST00000557258 K7ERU9 68 aa13.75□□□□□ -0.21
FOXN3-214ENST00000557258 MUSTN1Q8IVN3 82 aa13.75□□□□□ -0.21
FOXN3-214ENST00000557258 CLUHP3Q96NS8 147 aa13.75□□□□□ -0.21
FOXN3-214ENST00000557258 A0A0J9YXY3 114 aa13.75□□□□□ -0.21
FOXN3-214ENST00000557258 EIF4EBP3O60516 100 aaPredicted RBP13.75□□□□□ -0.21
FOXN3-214ENST00000557258 PRSS2P07478 247 aa13.75□□□□□ -0.21
FOXN3-214ENST00000557258 DAND5Q8N907 189 aa13.75□□□□□ -0.21
FOXN3-214ENST00000557258 PTH2Q96A98 100 aa13.75□□□□□ -0.21
FOXN3-214ENST00000557258 SPANXA1Q9NS26 97 aa13.75□□□□□ -0.21
FOXN3-214ENST00000557258 TEP1Q99973 2627 aaKnown RBP13.74□□□□□ -0.21
FOXN3-214ENST00000557258 PSMB2P49721 201 aa13.74□□□□□ -0.21
FOXN3-214ENST00000557258 RPL36AP83881 106 aaKnown RBP13.74□□□□□ -0.21
FOXN3-214ENST00000557258 RPL36ALQ969Q0 106 aaKnown RBP13.74□□□□□ -0.21
FOXN3-214ENST00000557258 DNAJC30Q96LL9 226 aa13.74□□□□□ -0.21
FOXN3-214ENST00000557258 ETDBQ3ZM63 59 aa13.73□□□□□ -0.21
FOXN3-214ENST00000557258 A0A0U1RRA0 63 aa13.73□□□□□ -0.21
FOXN3-214ENST00000557258 ADAMTSL4-AS1Q5T5F5 129 aa13.73□□□□□ -0.21
FOXN3-214ENST00000557258 ZNF625Q96I27 306 aaPredicted RBP13.73□□□□□ -0.21
FOXN3-214ENST00000557258 NDUFA12Q9UI09 145 aa13.73□□□□□ -0.21
FOXN3-214ENST00000557258 DEFB130BP0DP73 79 aa13.72□□□□□ -0.21
FOXN3-214ENST00000557258 DEFB130AP0DP74 79 aa13.72□□□□□ -0.21
FOXN3-214ENST00000557258 CSNK1G2-AS1Q8NCQ2 148 aa13.72□□□□□ -0.21
FOXN3-214ENST00000557258 IGKV3OR2-268A0A0C4DH90 116 aa13.72□□□□□ -0.21
FOXN3-214ENST00000557258 SPANXB1Q9NS25 103 aaPredicted RBP13.72□□□□□ -0.21
FOXN3-214ENST00000557258 TRAV4A0A0B4J268 109 aa13.71□□□□□ -0.21
FOXN3-214ENST00000557258 LINC00482Q8N8I6 264 aa13.71□□□□□ -0.21
FOXN3-214ENST00000557258 IGHV1-58A0A0C4DH39 117 aa13.71□□□□□ -0.22
FOXN3-214ENST00000557258 VSIG2Q96IQ7 327 aa13.71□□□□□ -0.22
FOXN3-214ENST00000557258 TINCRA0A1B0GVN0 87 aa13.7□□□□□ -0.22
FOXN3-214ENST00000557258 TRGV4A0A0C4DH28 118 aa13.69□□□□□ -0.22
FOXN3-214ENST00000557258 C16orf74Q96GX8 76 aa13.69□□□□□ -0.22
FOXN3-214ENST00000557258 UBE2D3P61077 147 aa13.68□□□□□ -0.22
FOXN3-214ENST00000557258 UBE2D2P62837 147 aa13.68□□□□□ -0.22
FOXN3-214ENST00000557258 DEFB4AO15263 64 aa13.67□□□□□ -0.22
FOXN3-214ENST00000557258 CRLF1O75462 422 aa13.67□□□□□ -0.22
FOXN3-214ENST00000557258 INSL3P51460 131 aa13.67□□□□□ -0.22
FOXN3-214ENST00000557258 DAZ2Q13117 558 aaKnown RBP13.67□□□□□ -0.22
FOXN3-214ENST00000557258 LINC00242Q5T6M2 205 aa13.67□□□□□ -0.22
FOXN3-214ENST00000557258 LITAFQ99732 161 aa13.67□□□□□ -0.22
FOXN3-214ENST00000557258 PRO1854Q9UHT4 67 aa13.67□□□□□ -0.22
FOXN3-214ENST00000557258 G3V4G9 280 aa13.67□□□□□ -0.22
FOXN3-214ENST00000557258 TMEM238C9JI98 176 aa13.66□□□□□ -0.22
FOXN3-214ENST00000557258 SCGB1C2P0DMR2 95 aa13.66□□□□□ -0.22
FOXN3-214ENST00000557258 TMEM101Q96IK0 257 aa13.66□□□□□ -0.22
FOXN3-214ENST00000557258 TCL1BO95988 128 aa13.65□□□□□ -0.22
FOXN3-214ENST00000557258 PRO0461Q9UI25 63 aa13.65□□□□□ -0.22
FOXN3-214ENST00000557258 GAGE6Q13070 117 aa13.65□□□□□ -0.22
FOXN3-214ENST00000557258 Q1RN00 199 aa13.65□□□□□ -0.22
FOXN3-214ENST00000557258 UBE2L6O14933 153 aa13.64□□□□□ -0.23
FOXN3-214ENST00000557258 DAZ4Q86SG3 579 aaKnown RBP13.64□□□□□ -0.23
FOXN3-214ENST00000557258 C1QTNF4Q9BXJ3 329 aa13.64□□□□□ -0.23
FOXN3-214ENST00000557258 DAZ3Q9NR90 486 aaKnown RBP13.64□□□□□ -0.23
FOXN3-214ENST00000557258 A0A096LPF7 62 aa13.64□□□□□ -0.23
FOXN3-214ENST00000557258 TRBV10-1A0A0K0K1A3 114 aa13.64□□□□□ -0.23
FOXN3-214ENST00000557258 F8W1H4 67 aa13.64□□□□□ -0.23
FOXN3-214ENST00000557258 CRYBA4P53673 196 aa13.64□□□□□ -0.23
FOXN3-214ENST00000557258 SMCPP49901 116 aaPredicted RBP13.63□□□□□ -0.23
FOXN3-214ENST00000557258 CMC4P56277 68 aaPredicted RBP13.62□□□□□ -0.23
FOXN3-214ENST00000557258 Q9H8V8 135 aa13.61□□□□□ -0.23
FOXN3-214ENST00000557258 FHL2Q14192 279 aa13.61□□□□□ -0.23
FOXN3-214ENST00000557258 CDC42SE2Q9NRR3 84 aa13.61□□□□□ -0.23
FOXN3-214ENST00000557258 TMEM243Q9BU79 118 aa13.6□□□□□ -0.23
FOXN3-214ENST00000557258 F8P00451 2351 aa13.6□□□□□ -0.23
FOXN3-214ENST00000557258 IGHV3-33P01772 117 aa13.6□□□□□ -0.23
FOXN3-214ENST00000557258 ZFAND6Q6FIF0 208 aa13.6□□□□□ -0.23
FOXN3-214ENST00000557258 SBSPONQ8IVN8 264 aa13.6□□□□□ -0.23
FOXN3-214ENST00000557258 FAM110AQ9BQ89 295 aa13.59□□□□□ -0.23
FOXN3-214ENST00000557258 ERG28Q9UKR5 140 aa13.59□□□□□ -0.23
FOXN3-214ENST00000557258 IGLV4-60A0A075B6I1 120 aa13.58□□□□□ -0.23
FOXN3-214ENST00000557258 CHCHD5Q9BSY4 110 aa13.58□□□□□ -0.23
FOXN3-214ENST00000557258 DEFB135Q30KP9 77 aa13.58□□□□□ -0.24
FOXN3-214ENST00000557258 OVOL2Q9BRP0 275 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms