RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 ANAPC16Q96DE5 110 aa6.73□□□□□ -1.33
SNX6-208ENST00000556712 TMEM101Q96IK0 257 aa6.73□□□□□ -1.33
SNX6-208ENST00000556712 BTF3L4Q96K17 158 aa6.73□□□□□ -1.33
SNX6-208ENST00000556712 hDV102S1A0JD36 115 aa6.72□□□□□ -1.33
SNX6-208ENST00000556712 F8W036 122 aa6.72□□□□□ -1.33
SNX6-208ENST00000556712 MT-ND4LP03901 98 aa6.72□□□□□ -1.33
SNX6-208ENST00000556712 RNASE13Q5GAN3 156 aaKnown RBP6.72□□□□□ -1.33
SNX6-208ENST00000556712 SCXQ7RTU7 201 aa6.72□□□□□ -1.33
SNX6-208ENST00000556712 ATP5L2Q7Z4Y8 100 aa6.72□□□□□ -1.33
SNX6-208ENST00000556712 COMMD7Q86VX2 200 aa6.72□□□□□ -1.33
SNX6-208ENST00000556712 C15orf56Q8N910 161 aa6.72□□□□□ -1.33
SNX6-208ENST00000556712 CHCHD10Q8WYQ3 142 aaPredicted RBP6.72□□□□□ -1.33
SNX6-208ENST00000556712 KIR2DL4Q99706 377 aa6.72□□□□□ -1.33
SNX6-208ENST00000556712 SMIM2Q9BVW6 85 aa6.72□□□□□ -1.33
SNX6-208ENST00000556712 TRBV24-1A0A075B6N3 115 aa6.71□□□□□ -1.34
SNX6-208ENST00000556712 TMEM218A2RU14 115 aa6.71□□□□□ -1.34
SNX6-208ENST00000556712 LINC00862A6NCI5 91 aa6.71□□□□□ -1.34
SNX6-208ENST00000556712 XCL1P47992 114 aa6.71□□□□□ -1.34
SNX6-208ENST00000556712 HIGD2BQ4VC39 106 aa6.71□□□□□ -1.34
SNX6-208ENST00000556712 UQCC3Q6UW78 93 aa6.71□□□□□ -1.34
SNX6-208ENST00000556712 Q6ZUT4 128 aa6.71□□□□□ -1.34
SNX6-208ENST00000556712 MRPL52Q86TS9 123 aaKnown RBP6.71□□□□□ -1.34
SNX6-208ENST00000556712 C20orf78Q9BR46 151 aa6.71□□□□□ -1.34
SNX6-208ENST00000556712 CDC42SE2Q9NRR3 84 aa6.71□□□□□ -1.34
SNX6-208ENST00000556712 LINC00959A0A1B0GUT2 108 aa6.7□□□□□ -1.34
SNX6-208ENST00000556712 TCAPO15273 167 aa6.7□□□□□ -1.34
SNX6-208ENST00000556712 CCL25O15444 150 aa6.7□□□□□ -1.34
SNX6-208ENST00000556712 RPL39P62891 51 aaKnown RBP6.7□□□□□ -1.34
SNX6-208ENST00000556712 FOXI1Q12951 378 aa6.7□□□□□ -1.34
SNX6-208ENST00000556712 ORMDL3Q8N138 153 aa6.7□□□□□ -1.34
SNX6-208ENST00000556712 ZNF664Q8N3J9 261 aa6.7□□□□□ -1.34
SNX6-208ENST00000556712 UBE2D4Q9Y2X8 147 aa6.7□□□□□ -1.34
SNX6-208ENST00000556712 SLPIP03973 132 aa6.69□□□□□ -1.34
SNX6-208ENST00000556712 RPL32P62910 135 aaKnown RBP6.69□□□□□ -1.34
SNX6-208ENST00000556712 DGAT2L7PQ6IED9 249 aa6.69□□□□□ -1.34
SNX6-208ENST00000556712 TMEM136Q6ZRR5 245 aa6.69□□□□□ -1.34
SNX6-208ENST00000556712 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
SNX6-208ENST00000556712 CLRN3Q8NCR9 226 aa6.69□□□□□ -1.34
SNX6-208ENST00000556712 PRELID3AQ96N28 172 aa6.69□□□□□ -1.34
SNX6-208ENST00000556712 PANO1I0J062 215 aa6.68□□□□□ -1.34
SNX6-208ENST00000556712 PPBPP02775 128 aa6.68□□□□□ -1.34
SNX6-208ENST00000556712 CNBPP62633 177 aaKnown RBP6.68□□□□□ -1.34
SNX6-208ENST00000556712 C9orf163Q8N9P6 203 aa6.68□□□□□ -1.34
SNX6-208ENST00000556712 CIRBP-AS1Q8TBR5 109 aa6.68□□□□□ -1.34
SNX6-208ENST00000556712 CHAC1Q9BUX1 264 aa6.68□□□□□ -1.34
SNX6-208ENST00000556712 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.68□□□□□ -1.34
SNX6-208ENST00000556712 LOC389332A0A1B0GUA5 103 aa6.67□□□□□ -1.34
SNX6-208ENST00000556712 PHOX2AO14813 284 aa6.67□□□□□ -1.34
SNX6-208ENST00000556712 SS18Q15532 418 aa6.67□□□□□ -1.34
SNX6-208ENST00000556712 OPRPNQ99935 248 aaPredicted RBP6.67□□□□□ -1.34
SNX6-208ENST00000556712 SEC11CQ9BY50 192 aa6.67□□□□□ -1.34
SNX6-208ENST00000556712 AP5S1Q9NUS5 200 aa6.67□□□□□ -1.34
SNX6-208ENST00000556712 GVQW2A0A096LPI5 108 aaPredicted RBP6.66□□□□□ -1.34
SNX6-208ENST00000556712 TRAV13-1A0A0B4J241 112 aa6.66□□□□□ -1.34
SNX6-208ENST00000556712 FAM229AH3BQW9 127 aa6.66□□□□□ -1.34
SNX6-208ENST00000556712 CHTF8P0CG12 524 aa6.66□□□□□ -1.34
SNX6-208ENST00000556712 INAFM2P0DMQ5 153 aa6.66□□□□□ -1.34
SNX6-208ENST00000556712 TMEM18Q96B42 140 aa6.66□□□□□ -1.34
SNX6-208ENST00000556712 LINC00526Q96FQ7 95 aa6.66□□□□□ -1.34
SNX6-208ENST00000556712 MAP1LC3AQ9H492 121 aa6.66□□□□□ -1.34
SNX6-208ENST00000556712 CSDC2Q9Y534 153 aaKnown RBP6.66□□□□□ -1.34
SNX6-208ENST00000556712 SMAGPQ0VAQ4 97 aa6.65□□□□□ -1.34
SNX6-208ENST00000556712 CFAP161Q6P656 301 aa6.65□□□□□ -1.34
SNX6-208ENST00000556712 SDIM1Q6ZPB5 146 aa6.65□□□□□ -1.34
SNX6-208ENST00000556712 FAM104AQ969W3 186 aa6.65□□□□□ -1.34
SNX6-208ENST00000556712 IMMP2LQ96T52 175 aa6.65□□□□□ -1.34
SNX6-208ENST00000556712 TIMM21Q9BVV7 248 aa6.65□□□□□ -1.34
SNX6-208ENST00000556712 CTDSP1Q9GZU7 261 aa6.65□□□□□ -1.34
SNX6-208ENST00000556712 IGHV3-64A0A075B6Q5 118 aa6.64□□□□□ -1.35
SNX6-208ENST00000556712 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.64□□□□□ -1.35
SNX6-208ENST00000556712 KIAA1644Q3SXP7 199 aa6.64□□□□□ -1.35
SNX6-208ENST00000556712 CD164L2Q6UWJ8 174 aa6.64□□□□□ -1.35
SNX6-208ENST00000556712 SPANXA1Q9NS26 97 aa6.64□□□□□ -1.35
SNX6-208ENST00000556712 LAMTOR2Q9Y2Q5 125 aa6.64□□□□□ -1.35
SNX6-208ENST00000556712 IGHV1-58A0A0C4DH39 117 aa6.63□□□□□ -1.35
SNX6-208ENST00000556712 IFITM10A6NMD0 228 aa6.63□□□□□ -1.35
SNX6-208ENST00000556712 C1orf196B1AJZ1 125 aa6.63□□□□□ -1.35
SNX6-208ENST00000556712 RAB5AP20339 215 aa6.63□□□□□ -1.35
SNX6-208ENST00000556712 C10orf91Q5T1B1 145 aa6.63□□□□□ -1.35
SNX6-208ENST00000556712 CARHSP1Q9Y2V2 147 aaKnown RBP6.63□□□□□ -1.35
SNX6-208ENST00000556712 TRAV9-1A0A075B6T8 112 aa6.62□□□□□ -1.35
SNX6-208ENST00000556712 PRSS47A8MTI9 375 aa6.62□□□□□ -1.35
SNX6-208ENST00000556712 MALP21145 153 aa6.62□□□□□ -1.35
SNX6-208ENST00000556712 S100PP25815 95 aa6.62□□□□□ -1.35
SNX6-208ENST00000556712 COX6A2Q02221 97 aa6.62□□□□□ -1.35
SNX6-208ENST00000556712 C4orf48Q5BLP8 95 aa6.62□□□□□ -1.35
SNX6-208ENST00000556712 C5orf38Q86SI9 138 aa6.62□□□□□ -1.35
SNX6-208ENST00000556712 Q8N8P6 123 aa6.62□□□□□ -1.35
SNX6-208ENST00000556712 PRSS3P2Q8NHM4 247 aa6.62□□□□□ -1.35
SNX6-208ENST00000556712 RPS10P5Q9NQ39 176 aa6.62□□□□□ -1.35
SNX6-208ENST00000556712 IGLV4-3A0A075B6K6 122 aa6.61□□□□□ -1.35
SNX6-208ENST00000556712 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
SNX6-208ENST00000556712 COX7A2LO14548 114 aa6.61□□□□□ -1.35
SNX6-208ENST00000556712 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
SNX6-208ENST00000556712 IFI27P40305 119 aaPredicted RBP6.61□□□□□ -1.35
SNX6-208ENST00000556712 KRTAP10-4P60372 401 aaPredicted RBP6.61□□□□□ -1.35
SNX6-208ENST00000556712 MRPS36P82909 103 aaKnown RBP6.61□□□□□ -1.35
SNX6-208ENST00000556712 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
SNX6-208ENST00000556712 ZC2HC1BQ5TFG8 222 aa6.61□□□□□ -1.35
SNX6-208ENST00000556712 SPACA4Q8TDM5 124 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms