RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 RAB14P61106 215 aa5.21□□□□□ -1.58
VTI1B-206ENST00000556461 CNBPP62633 177 aaKnown RBP5.21□□□□□ -1.58
VTI1B-206ENST00000556461 FOXI1Q12951 378 aa5.21□□□□□ -1.58
VTI1B-206ENST00000556461 HIGD2BQ4VC39 106 aa5.21□□□□□ -1.58
VTI1B-206ENST00000556461 CLLU1Q5K131 121 aa5.21□□□□□ -1.58
VTI1B-206ENST00000556461 DGAT2L7PQ6IED9 249 aa5.21□□□□□ -1.58
VTI1B-206ENST00000556461 SDIM1Q6ZPB5 146 aa5.21□□□□□ -1.58
VTI1B-206ENST00000556461 CLRN3Q8NCR9 226 aa5.21□□□□□ -1.58
VTI1B-206ENST00000556461 OR5A1Q8NGJ0 315 aa5.21□□□□□ -1.58
VTI1B-206ENST00000556461 CDC42SE2Q9NRR3 84 aa5.21□□□□□ -1.58
VTI1B-206ENST00000556461 TRBV24-1A0A075B6N3 115 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 LINC00959A0A1B0GUT2 108 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 A0A1B0GW15 77 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 D6R8Y8 96 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 TNFRSF6BO95407 300 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 NPYP01303 97 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 ZNF25P17030 456 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-206ENST00000556461 ADCYAP1P18509 176 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 CKS2P33552 79 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 XCL1P47992 114 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 KRTAP10-4P60372 401 aaPredicted RBP5.2□□□□□ -1.58
VTI1B-206ENST00000556461 HBBP68871 147 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 RNASE13Q5GAN3 156 aaKnown RBP5.2□□□□□ -1.58
VTI1B-206ENST00000556461 MRPL52Q86TS9 123 aaKnown RBP5.2□□□□□ -1.58
VTI1B-206ENST00000556461 TMEM101Q96IK0 257 aa5.2□□□□□ -1.58
VTI1B-206ENST00000556461 LINC00862A6NCI5 91 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 CCL25O15444 150 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 PPP1R17O96001 155 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 CHTF8P0CG12 524 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 FCER1GP30273 86 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 RPL39P62891 51 aaKnown RBP5.19□□□□□ -1.58
VTI1B-206ENST00000556461 ZNF664Q8N3J9 261 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 FAM104AQ969W3 186 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 LINC00526Q96FQ7 95 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 BTF3L4Q96K17 158 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 C20orf78Q9BR46 151 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 UBE2D4Q9Y2X8 147 aa5.19□□□□□ -1.58
VTI1B-206ENST00000556461 F8W036 122 aa5.18□□□□□ -1.58
VTI1B-206ENST00000556461 PPP1R2P9O14990 202 aa5.18□□□□□ -1.58
VTI1B-206ENST00000556461 TCAPO15273 167 aa5.18□□□□□ -1.58
VTI1B-206ENST00000556461 S100A8P05109 93 aa5.18□□□□□ -1.58
VTI1B-206ENST00000556461 RPL32P62910 135 aaKnown RBP5.18□□□□□ -1.58
VTI1B-206ENST00000556461 PNRC1Q12796 327 aaPredicted RBP5.18□□□□□ -1.58
VTI1B-206ENST00000556461 Q6ZUT4 128 aa5.18□□□□□ -1.58
VTI1B-206ENST00000556461 ATP5L2Q7Z4Y8 100 aa5.18□□□□□ -1.58
VTI1B-206ENST00000556461 SMIM2Q9BVW6 85 aa5.18□□□□□ -1.58
VTI1B-206ENST00000556461 AP5S1Q9NUS5 200 aa5.18□□□□□ -1.58
VTI1B-206ENST00000556461 IGHV3-64A0A075B6Q5 118 aa5.17□□□□□ -1.58
VTI1B-206ENST00000556461 GVQW2A0A096LPI5 108 aaPredicted RBP5.17□□□□□ -1.58
VTI1B-206ENST00000556461 MT-ND4LP03901 98 aa5.17□□□□□ -1.58
VTI1B-206ENST00000556461 CFAP161Q6P656 301 aa5.17□□□□□ -1.58
VTI1B-206ENST00000556461 TMEM136Q6ZRR5 245 aa5.17□□□□□ -1.58
VTI1B-206ENST00000556461 ANAPC16Q96DE5 110 aa5.17□□□□□ -1.58
VTI1B-206ENST00000556461 KIR2DL4Q99706 377 aa5.17□□□□□ -1.58
VTI1B-206ENST00000556461 OPRPNQ99935 248 aaPredicted RBP5.17□□□□□ -1.58
VTI1B-206ENST00000556461 CSDC2Q9Y534 153 aaKnown RBP5.17□□□□□ -1.58
VTI1B-206ENST00000556461 TRAV13-1A0A0B4J241 112 aa5.16□□□□□ -1.58
VTI1B-206ENST00000556461 TMEM218A2RU14 115 aa5.16□□□□□ -1.58
VTI1B-206ENST00000556461 PHOX2AO14813 284 aa5.16□□□□□ -1.58
VTI1B-206ENST00000556461 PLA2G1BP04054 148 aaKnown RBP5.16□□□□□ -1.58
VTI1B-206ENST00000556461 CIRBPQ14011 172 aaKnown RBP5.16□□□□□ -1.58
VTI1B-206ENST00000556461 SS18Q15532 418 aa5.16□□□□□ -1.58
VTI1B-206ENST00000556461 CD164L2Q6UWJ8 174 aa5.16□□□□□ -1.58
VTI1B-206ENST00000556461 ORMDL3Q8N138 153 aa5.16□□□□□ -1.58
VTI1B-206ENST00000556461 PRSS3P2Q8NHM4 247 aa5.16□□□□□ -1.58
VTI1B-206ENST00000556461 PRELID3AQ96N28 172 aa5.16□□□□□ -1.58
VTI1B-206ENST00000556461 TIMM21Q9BVV7 248 aa5.16□□□□□ -1.58
VTI1B-206ENST00000556461 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-206ENST00000556461 IGHV1-58A0A0C4DH39 117 aa5.15□□□□□ -1.59
VTI1B-206ENST00000556461 LOC389332A0A1B0GUA5 103 aa5.15□□□□□ -1.59
VTI1B-206ENST00000556461 PPBPP02775 128 aa5.15□□□□□ -1.59
VTI1B-206ENST00000556461 HNRNPA3P51991 378 aaKnown RBP5.15□□□□□ -1.59
VTI1B-206ENST00000556461 COX6A2Q02221 97 aa5.15□□□□□ -1.59
VTI1B-206ENST00000556461 SPACA4Q8TDM5 124 aa5.15□□□□□ -1.59
VTI1B-206ENST00000556461 A0A087WYN8 130 aa5.14□□□□□ -1.59
VTI1B-206ENST00000556461 UQCC3Q6UW78 93 aa5.14□□□□□ -1.59
VTI1B-206ENST00000556461 C5orf38Q86SI9 138 aa5.14□□□□□ -1.59
VTI1B-206ENST00000556461 COMMD7Q86VX2 200 aa5.14□□□□□ -1.59
VTI1B-206ENST00000556461 A0A096LNI7 61 aa5.13□□□□□ -1.59
VTI1B-206ENST00000556461 IGKV2-24A0A0C4DH68 120 aa5.13□□□□□ -1.59
VTI1B-206ENST00000556461 PRSS47A8MTI9 375 aa5.13□□□□□ -1.59
VTI1B-206ENST00000556461 C1orf196B1AJZ1 125 aa5.13□□□□□ -1.59
VTI1B-206ENST00000556461 COX7A2LO14548 114 aa5.13□□□□□ -1.59
VTI1B-206ENST00000556461 RPL37AP61513 92 aaKnown RBP5.13□□□□□ -1.59
VTI1B-206ENST00000556461 ZC2HC1BQ5TFG8 222 aa5.13□□□□□ -1.59
VTI1B-206ENST00000556461 TMEM18Q96B42 140 aa5.13□□□□□ -1.59
VTI1B-206ENST00000556461 SPANXA1Q9NS26 97 aa5.13□□□□□ -1.59
VTI1B-206ENST00000556461 IGLV4-69A0A075B6H9 119 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 IGLV4-3A0A075B6K6 122 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 MRPS36P82909 103 aaKnown RBP5.12□□□□□ -1.59
VTI1B-206ENST00000556461 SMAGPQ0VAQ4 97 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 MAJINQ3KP22 176 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 KIAA1644Q3SXP7 199 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 Q6ZRU5 148 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 Q8N8P6 123 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 DPH3Q96FX2 82 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 CARD19Q96LW7 228 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 IMMP2LQ96T52 175 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 SEC11CQ9BY50 192 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 MAP1LC3AQ9H492 121 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms