RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	FXYD6P3	P58550	94 aa		0.88	□□□□□ -2.27
KTN1-222	ENST00000555506	KRTDAP	P60985	99 aa		0.88	□□□□□ -2.27
KTN1-222	ENST00000555506	ARHGEF5	Q12774	1597 aa		0.88	□□□□□ -2.27
KTN1-222	ENST00000555506	COL4A6	Q14031	1691 aa		0.88	□□□□□ -2.27
KTN1-222	ENST00000555506	KRTAP5-10	Q6L8G5	202 aa		0.88	□□□□□ -2.27
KTN1-222	ENST00000555506	SMIM11B	Q8TCY0	68 aa		0.88	□□□□□ -2.27
KTN1-222	ENST00000555506	FYCO1	Q9BQS8	1478 aa		0.88	□□□□□ -2.27
KTN1-222	ENST00000555506	ZNF236	Q9UL36	1845 aa		0.88	□□□□□ -2.27
KTN1-222	ENST00000555506		V9GYH0	126 aa		0.88	□□□□□ -2.27
KTN1-222	ENST00000555506	ADGRL2	O95490	1459 aa		0.87	□□□□□ -2.27
KTN1-222	ENST00000555506	MAGI1	Q96QZ7	1491 aa	Predicted RBP	0.87	□□□□□ -2.27
KTN1-222	ENST00000555506	LOC285095	A0A1B0GVY8	99 aa		0.87	□□□□□ -2.27
KTN1-222	ENST00000555506	IGLC7	A0M8Q6	106 aa		0.87	□□□□□ -2.27
KTN1-222	ENST00000555506		F2Z2F3	143 aa		0.87	□□□□□ -2.27
KTN1-222	ENST00000555506	LINC00032	P0C843	101 aa		0.87	□□□□□ -2.27
KTN1-222	ENST00000555506	ZNF137P	P52743	207 aa		0.87	□□□□□ -2.27
KTN1-222	ENST00000555506	UBA52	P62987	128 aa	Known RBP	0.87	□□□□□ -2.27
KTN1-222	ENST00000555506	AP4S1	Q9Y587	144 aa		0.87	□□□□□ -2.27
KTN1-222	ENST00000555506	SYNE2	Q8WXH0	6885 aa	Known RBP	0.87	□□□□□ -2.27
KTN1-222	ENST00000555506	LAMC3	Q9Y6N6	1575 aa		0.87	□□□□□ -2.27
KTN1-222	ENST00000555506	ANKRD36B	Q8N2N9	1353 aa		0.87	□□□□□ -2.27
KTN1-222	ENST00000555506		A0A0D9SG42	100 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	C10orf142	B7Z368	130 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	SEC11A	P67812	179 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506		Q6ZRX8	168 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	MANBAL	Q9NQG1	85 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	UQCR10	Q9UDW1	63 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	PRO1854	Q9UHT4	67 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	DIP2C	Q9Y2E4	1556 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	HMGXB3	Q12766	1538 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	NOTCH1	P46531	2555 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	CRYM-AS1	A6NIL9	109 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506		F8VRH5	84 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506		G3V318	75 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	C6orf52	Q5T4I8	152 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	LINC01558	Q9Y6Z2	57 aa		0.86	□□□□□ -2.27
KTN1-222	ENST00000555506	CACNA1H	O95180	2353 aa		0.85	□□□□□ -2.27
KTN1-222	ENST00000555506	GNG2	P59768	71 aa		0.85	□□□□□ -2.27
KTN1-222	ENST00000555506	PMCHL2	Q9BQD1	86 aa		0.85	□□□□□ -2.27
KTN1-222	ENST00000555506	C10orf95	Q9H7T3	257 aa		0.85	□□□□□ -2.27
KTN1-222	ENST00000555506	KDM5A	P29375	1690 aa	Known RBP	0.84	□□□□□ -2.27
KTN1-222	ENST00000555506	KIF21A	Q7Z4S6	1674 aa		0.84	□□□□□ -2.27
KTN1-222	ENST00000555506	CTXND1	A0A1B0GTU2	59 aa		0.84	□□□□□ -2.28
KTN1-222	ENST00000555506	SFT2D2	O95562	160 aa		0.84	□□□□□ -2.28
KTN1-222	ENST00000555506	COX6C	P09669	75 aa		0.84	□□□□□ -2.28
KTN1-222	ENST00000555506	TMEM170B	Q5T4T1	132 aa		0.84	□□□□□ -2.28
KTN1-222	ENST00000555506	BAGE2	Q86Y30	109 aa		0.84	□□□□□ -2.28
KTN1-222	ENST00000555506	VAMP8	Q9BV40	100 aa		0.84	□□□□□ -2.28
KTN1-222	ENST00000555506	LINC00472	Q9H8W2	130 aa		0.84	□□□□□ -2.28
KTN1-222	ENST00000555506	EHBP1L1	Q8N3D4	1523 aa		0.84	□□□□□ -2.28
KTN1-222	ENST00000555506	NSD3	Q9BZ95	1437 aa		0.84	□□□□□ -2.28
KTN1-222	ENST00000555506	ZFHX3	Q15911	3703 aa		0.83	□□□□□ -2.28
KTN1-222	ENST00000555506	UQCR11	O14957	56 aa		0.83	□□□□□ -2.28
KTN1-222	ENST00000555506	NDUFC1	O43677	76 aa		0.83	□□□□□ -2.28
KTN1-222	ENST00000555506	IGLC1	P0CG04	106 aa		0.83	□□□□□ -2.28
KTN1-222	ENST00000555506	CFAP126	Q5VTH2	177 aa		0.83	□□□□□ -2.28
KTN1-222	ENST00000555506	KRTAP19-3	Q7Z4W3	81 aa		0.83	□□□□□ -2.28
KTN1-222	ENST00000555506	RAPGEF2	Q9Y4G8	1499 aa		0.83	□□□□□ -2.28
KTN1-222	ENST00000555506	TOP2B	Q02880	1626 aa		0.83	□□□□□ -2.28
KTN1-222	ENST00000555506	DNAJC13	O75165	2243 aa		0.83	□□□□□ -2.28
KTN1-222	ENST00000555506	SBF2	Q86WG5	1849 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	TRBV7-7	A0A0K0K1E9	115 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506		H7BZZ5	65 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	ATOX1	O00244	68 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	SPATA8	Q6RVD6	105 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	SFTA2	Q6UW10	78 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	SMIM4	Q8WVI0	70 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	PRR15L	Q9BU68	103 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	PROK2	Q9HC23	129 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	NXT2	Q9NPJ8	142 aa	Known RBP	0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	FAM208B	Q5VWN6	2430 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	KIAA1551	Q9HCM1	1747 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	MARF1	Q9Y4F3	1742 aa	Known RBP	0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	BTAF1	O14981	1849 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	PLXNB2	O15031	1838 aa		0.82	□□□□□ -2.28
KTN1-222	ENST00000555506	GCHFR	P30047	84 aa		0.81	□□□□□ -2.28
KTN1-222	ENST00000555506	FAM223A	Q8IWN6	122 aa		0.81	□□□□□ -2.28
KTN1-222	ENST00000555506	SERP2	Q8N6R1	65 aa		0.81	□□□□□ -2.28
KTN1-222	ENST00000555506	ARL2-SNX15	V9GYD0	113 aa		0.81	□□□□□ -2.28
KTN1-222	ENST00000555506	GOLGA4	Q13439	2230 aa	Known RBP	0.81	□□□□□ -2.28
KTN1-222	ENST00000555506	MLH3	Q9UHC1	1453 aa		0.81	□□□□□ -2.28
KTN1-222	ENST00000555506	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.81	□□□□□ -2.28
KTN1-222	ENST00000555506	PDCD11	Q14690	1871 aa	Known RBP	0.81	□□□□□ -2.28
KTN1-222	ENST00000555506	APOC3	P02656	99 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	TRAPPC2	P0DI81	140 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	TRAPPC2B	P0DI82	140 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	ASIP	P42127	132 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	SPRR4	Q96PI1	79 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	TRGV9	Q99603	122 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	FAM103A1	Q9BTL3	118 aa	Known RBP	0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	NPVF	Q9HCQ7	196 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	FAIM	Q9NVQ4	179 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506		V9GYS6	101 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	SCN7A	Q01118	1682 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	LRRC37A2	A6NM11	1700 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	PVALEF	A0A1B0GWK0	134 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	COX17	Q14061	63 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	CACFD1	Q9UGQ2	172 aa		0.8	□□□□□ -2.28
KTN1-222	ENST00000555506	PLEKHH2	Q8IVE3	1493 aa		0.79	□□□□□ -2.28
KTN1-222	ENST00000555506	WNK3	Q9BYP7	1800 aa		0.79	□□□□□ -2.28

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