RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZNF25P17030 456 aaPredicted RBP8.84□□□□□ -0.99
SNX6-203ENST00000555416 FCER1GP30273 86 aa8.84□□□□□ -0.99
SNX6-203ENST00000555416 Q5VSD8 79 aa8.84□□□□□ -0.99
SNX6-203ENST00000555416 MRPL52Q86TS9 123 aaKnown RBP8.84□□□□□ -0.99
SNX6-203ENST00000555416 C15orf56Q8N910 161 aa8.84□□□□□ -0.99
SNX6-203ENST00000555416 ANAPC16Q96DE5 110 aa8.84□□□□□ -0.99
SNX6-203ENST00000555416 F8W036 122 aa8.83□□□□□ -1
SNX6-203ENST00000555416 PPP1R17O96001 155 aa8.83□□□□□ -1
SNX6-203ENST00000555416 S100A8P05109 93 aa8.83□□□□□ -1
SNX6-203ENST00000555416 UQCC3Q6UW78 93 aa8.83□□□□□ -1
SNX6-203ENST00000555416 ATP5L2Q7Z4Y8 100 aa8.83□□□□□ -1
SNX6-203ENST00000555416 OR5A1Q8NGJ0 315 aa8.83□□□□□ -1
SNX6-203ENST00000555416 C20orf78Q9BR46 151 aa8.83□□□□□ -1
SNX6-203ENST00000555416 CDC42SE2Q9NRR3 84 aa8.83□□□□□ -1
SNX6-203ENST00000555416 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
SNX6-203ENST00000555416 LINC00959A0A1B0GUT2 108 aa8.82□□□□□ -1
SNX6-203ENST00000555416 hDV102S1A0JD36 115 aa8.82□□□□□ -1
SNX6-203ENST00000555416 RPL32P62910 135 aaKnown RBP8.82□□□□□ -1
SNX6-203ENST00000555416 FOXI1Q12951 378 aa8.82□□□□□ -1
SNX6-203ENST00000555416 RNASE13Q5GAN3 156 aaKnown RBP8.82□□□□□ -1
SNX6-203ENST00000555416 SCXQ7RTU7 201 aa8.82□□□□□ -1
SNX6-203ENST00000555416 COMMD7Q86VX2 200 aa8.82□□□□□ -1
SNX6-203ENST00000555416 FAM104AQ969W3 186 aa8.82□□□□□ -1
SNX6-203ENST00000555416 TMEM101Q96IK0 257 aa8.82□□□□□ -1
SNX6-203ENST00000555416 SMIM2Q9BVW6 85 aa8.82□□□□□ -1
SNX6-203ENST00000555416 UBE2D4Q9Y2X8 147 aa8.82□□□□□ -1
SNX6-203ENST00000555416 PANO1I0J062 215 aa8.81□□□□□ -1
SNX6-203ENST00000555416 RPL39P62891 51 aaKnown RBP8.81□□□□□ -1
SNX6-203ENST00000555416 DGAT2L7PQ6IED9 249 aa8.81□□□□□ -1
SNX6-203ENST00000555416 TMEM136Q6ZRR5 245 aa8.81□□□□□ -1
SNX6-203ENST00000555416 ZNF664Q8N3J9 261 aa8.81□□□□□ -1
SNX6-203ENST00000555416 C9orf163Q8N9P6 203 aa8.81□□□□□ -1
SNX6-203ENST00000555416 BTF3L4Q96K17 158 aa8.81□□□□□ -1
SNX6-203ENST00000555416 KIR2DL4Q99706 377 aa8.81□□□□□ -1
SNX6-203ENST00000555416 VPS13BQ7Z7G8 4022 aa8.81□□□□□ -1
SNX6-203ENST00000555416 TCAPO15273 167 aa8.8□□□□□ -1
SNX6-203ENST00000555416 CCL25O15444 150 aa8.8□□□□□ -1
SNX6-203ENST00000555416 XCL1P47992 114 aa8.8□□□□□ -1
SNX6-203ENST00000555416 HIGD2BQ4VC39 106 aa8.8□□□□□ -1
SNX6-203ENST00000555416 LCE2CQ5TA81 110 aa8.8□□□□□ -1
SNX6-203ENST00000555416 Q6ZUT4 128 aa8.8□□□□□ -1
SNX6-203ENST00000555416 CLRN3Q8NCR9 226 aa8.8□□□□□ -1
SNX6-203ENST00000555416 CIRBP-AS1Q8TBR5 109 aa8.8□□□□□ -1
SNX6-203ENST00000555416 PRELID3AQ96N28 172 aa8.8□□□□□ -1
SNX6-203ENST00000555416 CHAC1Q9BUX1 264 aa8.8□□□□□ -1
SNX6-203ENST00000555416 PPBPP02775 128 aa8.79□□□□□ -1
SNX6-203ENST00000555416 CNBPP62633 177 aaKnown RBP8.79□□□□□ -1
SNX6-203ENST00000555416 SDIM1Q6ZPB5 146 aa8.79□□□□□ -1
SNX6-203ENST00000555416 ORMDL3Q8N138 153 aa8.79□□□□□ -1
SNX6-203ENST00000555416 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.79□□□□□ -1
SNX6-203ENST00000555416 PHOX2AO14813 284 aa8.78□□□□□ -1
SNX6-203ENST00000555416 OPRPNQ99935 248 aaPredicted RBP8.78□□□□□ -1
SNX6-203ENST00000555416 SEC11CQ9BY50 192 aa8.78□□□□□ -1
SNX6-203ENST00000555416 CSDC2Q9Y534 153 aaKnown RBP8.78□□□□□ -1
SNX6-203ENST00000555416 LINC00526Q96FQ7 95 aa8.77□□□□□ -1.01
SNX6-203ENST00000555416 TIMM21Q9BVV7 248 aa8.77□□□□□ -1.01
SNX6-203ENST00000555416 LOC389332A0A1B0GUA5 103 aa8.76□□□□□ -1.01
SNX6-203ENST00000555416 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
SNX6-203ENST00000555416 C10orf91Q5T1B1 145 aa8.76□□□□□ -1.01
SNX6-203ENST00000555416 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
SNX6-203ENST00000555416 GVQW2A0A096LPI5 108 aaPredicted RBP8.75□□□□□ -1.01
SNX6-203ENST00000555416 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
SNX6-203ENST00000555416 PRSS47A8MTI9 375 aa8.75□□□□□ -1.01
SNX6-203ENST00000555416 FAM229AH3BQW9 127 aa8.75□□□□□ -1.01
SNX6-203ENST00000555416 SS18Q15532 418 aa8.75□□□□□ -1.01
SNX6-203ENST00000555416 CFAP161Q6P656 301 aa8.75□□□□□ -1.01
SNX6-203ENST00000555416 IMMP2LQ96T52 175 aa8.75□□□□□ -1.01
SNX6-203ENST00000555416 CTDSP1Q9GZU7 261 aa8.75□□□□□ -1.01
SNX6-203ENST00000555416 AP5S1Q9NUS5 200 aa8.75□□□□□ -1.01
SNX6-203ENST00000555416 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
SNX6-203ENST00000555416 KIAA1644Q3SXP7 199 aa8.74□□□□□ -1.01
SNX6-203ENST00000555416 CD164L2Q6UWJ8 174 aa8.74□□□□□ -1.01
SNX6-203ENST00000555416 CARHSP1Q9Y2V2 147 aaKnown RBP8.74□□□□□ -1.01
SNX6-203ENST00000555416 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
SNX6-203ENST00000555416 TMEM18Q96B42 140 aa8.73□□□□□ -1.01
SNX6-203ENST00000555416 IGHV3-64A0A075B6Q5 118 aa8.72□□□□□ -1.01
SNX6-203ENST00000555416 C1orf196B1AJZ1 125 aa8.72□□□□□ -1.01
SNX6-203ENST00000555416 CIRBPQ14011 172 aaKnown RBP8.72□□□□□ -1.01
SNX6-203ENST00000555416 Q8N8P6 123 aa8.72□□□□□ -1.01
SNX6-203ENST00000555416 PRSS3P2Q8NHM4 247 aa8.72□□□□□ -1.01
SNX6-203ENST00000555416 MAP1LC3AQ9H492 121 aa8.72□□□□□ -1.01
SNX6-203ENST00000555416 SPANXA1Q9NS26 97 aa8.72□□□□□ -1.01
SNX6-203ENST00000555416 LAMTOR2Q9Y2Q5 125 aa8.72□□□□□ -1.01
SNX6-203ENST00000555416 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.71□□□□□ -1.02
SNX6-203ENST00000555416 IGHV1-58A0A0C4DH39 117 aa8.71□□□□□ -1.02
SNX6-203ENST00000555416 RAB5AP20339 215 aa8.71□□□□□ -1.02
SNX6-203ENST00000555416 MRPS36P82909 103 aaKnown RBP8.71□□□□□ -1.02
SNX6-203ENST00000555416 SMAGPQ0VAQ4 97 aa8.71□□□□□ -1.02
SNX6-203ENST00000555416 C5orf38Q86SI9 138 aa8.71□□□□□ -1.02
SNX6-203ENST00000555416 MYCBP2O75592 4640 aa8.71□□□□□ -1.02
SNX6-203ENST00000555416 TRAV9-1A0A075B6T8 112 aa8.7□□□□□ -1.02
SNX6-203ENST00000555416 COX7A2LO14548 114 aa8.7□□□□□ -1.02
SNX6-203ENST00000555416 COX6A2Q02221 97 aa8.7□□□□□ -1.02
SNX6-203ENST00000555416 IGLV4-3A0A075B6K6 122 aa8.69□□□□□ -1.02
SNX6-203ENST00000555416 IFI27P40305 119 aaPredicted RBP8.69□□□□□ -1.02
SNX6-203ENST00000555416 ZC2HC1BQ5TFG8 222 aa8.69□□□□□ -1.02
SNX6-203ENST00000555416 SPACA4Q8TDM5 124 aa8.69□□□□□ -1.02
SNX6-203ENST00000555416 RPS10P5Q9NQ39 176 aa8.69□□□□□ -1.02
SNX6-203ENST00000555416 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
SNX6-203ENST00000555416 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms