RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 FAM236BA0A1B0GV22 79 aa7.78□□□□□ -1.16
MTHFD1-210ENST00000555252 ADARB2-AS1A8MUL3 147 aa7.78□□□□□ -1.16
MTHFD1-210ENST00000555252 DNAJC30Q96LL9 226 aa7.78□□□□□ -1.16
MTHFD1-210ENST00000555252 NACAE9PAV3 2078 aa7.77□□□□□ -1.16
MTHFD1-210ENST00000555252 TRAV12-2A0A075B6T6 113 aa7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 A8MTW9 85 aa7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 IGKV3-20P01619 116 aa7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 INAFM2P0DMQ5 153 aa7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 SPINK13Q1W4C9 94 aa7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 LINC00526Q96FQ7 95 aa7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 J3QKU1 62 aa7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 DEFB113Q30KQ7 82 aa7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 CITED2Q99967 270 aaPredicted RBP7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 CHCHD7Q9BUK0 85 aa7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 CSMD1Q96PZ7 3565 aa7.77□□□□□ -1.17
MTHFD1-210ENST00000555252 AKAP6Q13023 2319 aa7.76□□□□□ -1.17
MTHFD1-210ENST00000555252 CRYBG3Q68DQ2 2970 aa7.76□□□□□ -1.17
MTHFD1-210ENST00000555252 FAM19A3Q7Z5A8 133 aa7.76□□□□□ -1.17
MTHFD1-210ENST00000555252 C5orf38Q86SI9 138 aa7.76□□□□□ -1.17
MTHFD1-210ENST00000555252 A0A1B0GX51 115 aa7.75□□□□□ -1.17
MTHFD1-210ENST00000555252 NDUFA7O95182 113 aa7.75□□□□□ -1.17
MTHFD1-210ENST00000555252 C9orf153Q5TBE3 101 aa7.75□□□□□ -1.17
MTHFD1-210ENST00000555252 MAPK1IP1LQ8NDC0 245 aa7.75□□□□□ -1.17
MTHFD1-210ENST00000555252 LINC00308Q8TCZ7 52 aa7.75□□□□□ -1.17
MTHFD1-210ENST00000555252 DUX5Q96PT3 197 aa7.75□□□□□ -1.17
MTHFD1-210ENST00000555252 ZNF415Q09FC8 603 aa7.75□□□□□ -1.17
MTHFD1-210ENST00000555252 CENPEQ02224 2701 aa7.74□□□□□ -1.17
MTHFD1-210ENST00000555252 IGLV5-39A0A0G2JS06 123 aa7.74□□□□□ -1.17
MTHFD1-210ENST00000555252 PF4P02776 101 aa7.74□□□□□ -1.17
MTHFD1-210ENST00000555252 HERVK_113P63121 156 aa7.74□□□□□ -1.17
MTHFD1-210ENST00000555252 BEAN1Q3B7T3 259 aa7.74□□□□□ -1.17
MTHFD1-210ENST00000555252 TMEM86BQ8N661 226 aa7.74□□□□□ -1.17
MTHFD1-210ENST00000555252 C4orf3Q8WVX3 66 aa7.74□□□□□ -1.17
MTHFD1-210ENST00000555252 OVOL2Q9BRP0 275 aa7.74□□□□□ -1.17
MTHFD1-210ENST00000555252 USP9YO00507 2555 aaPredicted RBP7.74□□□□□ -1.17
MTHFD1-210ENST00000555252 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.74□□□□□ -1.174e-7■■■■■ 33.8
MTHFD1-210ENST00000555252 Q6ZSV7 163 aa7.74□□□□□ -1.17
MTHFD1-210ENST00000555252 SLURP1P55000 103 aa7.73□□□□□ -1.17
MTHFD1-210ENST00000555252 LINC00467Q9BRT7 94 aa7.73□□□□□ -1.17
MTHFD1-210ENST00000555252 ASH1LQ9NR48 2969 aaKnown RBP7.73□□□□□ -1.17
MTHFD1-210ENST00000555252 ATOX1O00244 68 aa7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 COX7CP15954 63 aa7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 DEFB131AP59861 70 aa7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 NPC2P61916 151 aa7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 HIST1H4AP62805 103 aaKnown RBP7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 DAZ2Q13117 558 aaKnown RBP7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 FBN2P35556 2912 aa7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 KNCNA6PVL3 124 aa7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 CRYGAP11844 174 aa7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 RPS28P62857 69 aaKnown RBP7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 SMCR5Q8TEV8 140 aa7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 CDKN2A-AS1Q9UH64 79 aa7.72□□□□□ -1.17
MTHFD1-210ENST00000555252 CEMP1Q6PRD7 247 aaPredicted RBP7.71□□□□□ -1.17
MTHFD1-210ENST00000555252 DYNLRB2Q8TF09 96 aa7.71□□□□□ -1.17
MTHFD1-210ENST00000555252 CELSR2Q9HCU4 2923 aa7.71□□□□□ -1.18
MTHFD1-210ENST00000555252 J3KT08 172 aa7.71□□□□□ -1.18
MTHFD1-210ENST00000555252 IGHV3-53P01767 116 aa7.71□□□□□ -1.18
MTHFD1-210ENST00000555252 BAALC-AS2P0C853 105 aa7.71□□□□□ -1.18
MTHFD1-210ENST00000555252 Q96MF0 132 aa7.71□□□□□ -1.18
MTHFD1-210ENST00000555252 A8MZ25 164 aa7.7□□□□□ -1.18
MTHFD1-210ENST00000555252 RBMY1A1P0DJD3 496 aaKnown RBP7.7□□□□□ -1.18
MTHFD1-210ENST00000555252 RBMY1CP0DJD4 496 aa7.7□□□□□ -1.18
MTHFD1-210ENST00000555252 RBMY1FQ15415 496 aaKnown RBP7.7□□□□□ -1.18
MTHFD1-210ENST00000555252 Q9H8V8 135 aa7.7□□□□□ -1.18
MTHFD1-210ENST00000555252 CSDC2Q9Y534 153 aaKnown RBP7.7□□□□□ -1.18
MTHFD1-210ENST00000555252 CSMD2Q7Z408 3487 aa7.7□□□□□ -1.18
MTHFD1-210ENST00000555252 TRAV25A0A0B4J276 109 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 KRTAP10-9P60411 292 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 DEFB136Q30KP8 78 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 RNASE13Q5GAN3 156 aaKnown RBP7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 MAP6D1Q9H9H5 199 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 SPG11Q96JI7 2443 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 TRAV13-2A0A0B4J235 113 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 LINC00694P0DN24 101 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 RPL28P46779 137 aaKnown RBP7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 DEFB114Q30KQ6 69 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 HIST2H2BCQ6DN03 193 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 HIST2H2BDQ6DRA6 164 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 C18orf65Q6ZTR6 163 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 DOPEY2Q9Y3R5 2298 aa7.69□□□□□ -1.18
MTHFD1-210ENST00000555252 POLQO75417 2590 aa7.68□□□□□ -1.18
MTHFD1-210ENST00000555252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.68□□□□□ -1.18
MTHFD1-210ENST00000555252 IGKV2-29A2NJV5 120 aaPredicted RBP7.68□□□□□ -1.18
MTHFD1-210ENST00000555252 RBMY1BA6NDE4 496 aaKnown RBP7.68□□□□□ -1.18
MTHFD1-210ENST00000555252 RBMY1EA6NEQ0 496 aaKnown RBP7.68□□□□□ -1.18
MTHFD1-210ENST00000555252 INSP01308 110 aa7.68□□□□□ -1.18
MTHFD1-210ENST00000555252 RBMY1DP0C7P1 496 aaKnown RBP7.68□□□□□ -1.18
MTHFD1-210ENST00000555252 DGAT2L7PQ6IED9 249 aa7.68□□□□□ -1.18
MTHFD1-210ENST00000555252 ZNF625Q96I27 306 aaPredicted RBP7.68□□□□□ -1.18
MTHFD1-210ENST00000555252 C2orf48Q96LS8 159 aa7.67□□□□□ -1.18
MTHFD1-210ENST00000555252 SVEP1Q4LDE5 3571 aa7.67□□□□□ -1.18
MTHFD1-210ENST00000555252 PTPN13Q12923 2485 aa7.67□□□□□ -1.18
MTHFD1-210ENST00000555252 SMIM1B2RUZ4 78 aa7.67□□□□□ -1.18
MTHFD1-210ENST00000555252 MALP21145 153 aa7.67□□□□□ -1.18
MTHFD1-210ENST00000555252 PROK1P58294 105 aa7.67□□□□□ -1.18
MTHFD1-210ENST00000555252 KHDC1LQ5JSQ8 128 aa7.67□□□□□ -1.18
MTHFD1-210ENST00000555252 LINC00242Q5T6M2 205 aa7.67□□□□□ -1.18
MTHFD1-210ENST00000555252 C22orf24Q9Y442 160 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms