RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.8□□□□□ -0.68
XRCC3-211ENST00000555055 RHODO00212 210 aa10.8□□□□□ -0.68
XRCC3-211ENST00000555055 TMEM86BQ8N661 226 aa10.8□□□□□ -0.68
XRCC3-211ENST00000555055 RPL13AP40429 203 aaKnown RBP10.79□□□□□ -0.68
XRCC3-211ENST00000555055 Q6ZSN1 163 aa10.79□□□□□ -0.68
XRCC3-211ENST00000555055 ZNRF2Q8NHG8 242 aa10.79□□□□□ -0.68
XRCC3-211ENST00000555055 SPANXA1Q9NS26 97 aa10.79□□□□□ -0.68
XRCC3-211ENST00000555055 FLNBO75369 2602 aaKnown RBP10.79□□□□□ -0.68
XRCC3-211ENST00000555055 RHOHQ15669 191 aa10.79□□□□□ -0.68
XRCC3-211ENST00000555055 SHISA2Q6UWI4 295 aa10.79□□□□□ -0.68
XRCC3-211ENST00000555055 ATRQ13535 2644 aa10.79□□□□□ -0.68
XRCC3-211ENST00000555055 TMEM170BQ5T4T1 132 aa10.78□□□□□ -0.68
XRCC3-211ENST00000555055 TMEM223A0PJW6 202 aa10.78□□□□□ -0.68
XRCC3-211ENST00000555055 A4D1N5 150 aa10.77□□□□□ -0.68
XRCC3-211ENST00000555055 ATXN8Q156A1 80 aa10.77□□□□□ -0.68
XRCC3-211ENST00000555055 TRGV11A0A075B6L2 103 aa10.77□□□□□ -0.69
XRCC3-211ENST00000555055 C9JAW5 83 aa10.77□□□□□ -0.69
XRCC3-211ENST00000555055 B5MCH6 92 aa10.76□□□□□ -0.69
XRCC3-211ENST00000555055 CEMP1Q6PRD7 247 aaPredicted RBP10.76□□□□□ -0.69
XRCC3-211ENST00000555055 IGHV3-38A0A0C4DH36 116 aa10.75□□□□□ -0.69
XRCC3-211ENST00000555055 TRBV30A0A0K0K1B3 111 aa10.75□□□□□ -0.69
XRCC3-211ENST00000555055 RNASE13Q5GAN3 156 aaKnown RBP10.75□□□□□ -0.69
XRCC3-211ENST00000555055 EIF4EBP3O60516 100 aaPredicted RBP10.75□□□□□ -0.69
XRCC3-211ENST00000555055 SNCGO76070 127 aa10.75□□□□□ -0.69
XRCC3-211ENST00000555055 GAGE2BQ13066 116 aa10.75□□□□□ -0.69
XRCC3-211ENST00000555055 MRPL23Q16540 153 aaKnown RBP10.75□□□□□ -0.69
XRCC3-211ENST00000555055 GAGE2EQ4V326 116 aa10.75□□□□□ -0.69
XRCC3-211ENST00000555055 STHQ8IWL8 128 aa10.75□□□□□ -0.69
XRCC3-211ENST00000555055 GAGE2DQ9UEU5 116 aa10.75□□□□□ -0.69
XRCC3-211ENST00000555055 M0R2P5 195 aa10.74□□□□□ -0.69
XRCC3-211ENST00000555055 RNASE1P07998 156 aaKnown RBP10.74□□□□□ -0.69
XRCC3-211ENST00000555055 NHLRC4P0CG21 123 aaPredicted RBP10.74□□□□□ -0.69
XRCC3-211ENST00000555055 LINC01620Q4KN68 170 aa10.74□□□□□ -0.69
XRCC3-211ENST00000555055 TRBV10-2A0A0K0K1G8 114 aa10.73□□□□□ -0.69
XRCC3-211ENST00000555055 RPL35AP18077 110 aaKnown RBP10.73□□□□□ -0.69
XRCC3-211ENST00000555055 HERV-K104P63124 156 aa10.73□□□□□ -0.69
XRCC3-211ENST00000555055 IGHV3-53P01767 116 aa10.73□□□□□ -0.69
XRCC3-211ENST00000555055 NDUFV3P56181 108 aaKnown RBP10.73□□□□□ -0.69
XRCC3-211ENST00000555055 C11orf72Q8NBR9 251 aa10.73□□□□□ -0.69
XRCC3-211ENST00000555055 LY6G6DO95868 133 aa10.72□□□□□ -0.69
XRCC3-211ENST00000555055 KRTAP10-3P60369 221 aa10.72□□□□□ -0.69
XRCC3-211ENST00000555055 TRPT1Q86TN4 253 aaKnown RBP10.72□□□□□ -0.69
XRCC3-211ENST00000555055 C1orf158Q8N1D5 194 aa10.72□□□□□ -0.69
XRCC3-211ENST00000555055 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
XRCC3-211ENST00000555055 INSP01308 110 aa10.72□□□□□ -0.69
XRCC3-211ENST00000555055 ZNF22P17026 224 aaPredicted RBP10.72□□□□□ -0.69
XRCC3-211ENST00000555055 FAM110AQ9BQ89 295 aa10.72□□□□□ -0.69
XRCC3-211ENST00000555055 MUSTN1Q8IVN3 82 aa10.72□□□□□ -0.69
XRCC3-211ENST00000555055 SPATA3Q8NHX4 192 aa10.72□□□□□ -0.69
XRCC3-211ENST00000555055 A8MTW9 85 aa10.71□□□□□ -0.69
XRCC3-211ENST00000555055 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.69
XRCC3-211ENST00000555055 NTN5Q8WTR8 489 aaPredicted RBP10.71□□□□□ -0.69
XRCC3-211ENST00000555055 IFITM1P13164 125 aa10.71□□□□□ -0.7
XRCC3-211ENST00000555055 HILS1P60008 231 aa10.71□□□□□ -0.7
XRCC3-211ENST00000555055 ZNF415Q09FC8 603 aa10.71□□□□□ -0.7
XRCC3-211ENST00000555055 FAM240AA0A1B0GVK7 77 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 INAFM1C9JVW0 142 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 H3BT86 120 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 C20orf203Q8NBC4 194 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 TRAV2A0A0B4J234 112 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 TRAV8-4A0A0B4J246 113 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 GAGE12JA6NER3 117 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 GAGE7O76087 117 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 GAGE12FP0CL80 117 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 GAGE12GP0CL81 117 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 GAGE12IP0CL82 117 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 GAGE4Q13068 117 aa10.7□□□□□ -0.7
XRCC3-211ENST00000555055 TRGV1A0A0A0MS02 117 aa10.69□□□□□ -0.7
XRCC3-211ENST00000555055 A0A0J9YXY3 114 aa10.69□□□□□ -0.7
XRCC3-211ENST00000555055 SPANXDQ9BXN6 97 aa10.69□□□□□ -0.7
XRCC3-211ENST00000555055 EDA2RQ9HAV5 297 aa10.69□□□□□ -0.7
XRCC3-211ENST00000555055 SPANXCQ9NY87 97 aa10.69□□□□□ -0.7
XRCC3-211ENST00000555055 TRAV4A0A0B4J268 109 aa10.69□□□□□ -0.7
XRCC3-211ENST00000555055 I3L3M4 83 aa10.69□□□□□ -0.7
XRCC3-211ENST00000555055 TTC32Q5I0X7 151 aa10.69□□□□□ -0.7
XRCC3-211ENST00000555055 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
XRCC3-211ENST00000555055 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
XRCC3-211ENST00000555055 DEFB121Q5J5C9 76 aa10.68□□□□□ -0.7
XRCC3-211ENST00000555055 TEP1Q99973 2627 aaKnown RBP10.68□□□□□ -0.7
XRCC3-211ENST00000555055 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.68□□□□□ -0.7
XRCC3-211ENST00000555055 IGKV2-29A2NJV5 120 aaPredicted RBP10.68□□□□□ -0.7
XRCC3-211ENST00000555055 Q6ZTI0 123 aa10.68□□□□□ -0.7
XRCC3-211ENST00000555055 LITAFQ99732 161 aa10.68□□□□□ -0.7
XRCC3-211ENST00000555055 TNFRSF18Q9Y5U5 241 aa10.68□□□□□ -0.7
XRCC3-211ENST00000555055 Q1RN00 199 aa10.67□□□□□ -0.7
XRCC3-211ENST00000555055 SMIM20Q8N5G0 67 aa10.67□□□□□ -0.7
XRCC3-211ENST00000555055 IGLV4-3A0A075B6K6 122 aa10.67□□□□□ -0.7
XRCC3-211ENST00000555055 TRIAP1O43715 76 aa10.67□□□□□ -0.7
XRCC3-211ENST00000555055 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
XRCC3-211ENST00000555055 C16orf95Q9H693 158 aa10.67□□□□□ -0.7
XRCC3-211ENST00000555055 A0A0J9YXV3 536 aa10.66□□□□□ -0.7
XRCC3-211ENST00000555055 CRLF1O75462 422 aa10.66□□□□□ -0.7
XRCC3-211ENST00000555055 MRPS36P82909 103 aaKnown RBP10.66□□□□□ -0.7
XRCC3-211ENST00000555055 COX6CP09669 75 aa10.65□□□□□ -0.7
XRCC3-211ENST00000555055 NOP10Q9NPE3 64 aaKnown RBP10.65□□□□□ -0.7
XRCC3-211ENST00000555055 ICOSQ9Y6W8 199 aa10.65□□□□□ -0.71
XRCC3-211ENST00000555055 TEX49A0A1B0GTD5 131 aa10.64□□□□□ -0.71
XRCC3-211ENST00000555055 IGHV3-30-3P0DP02 117 aa10.64□□□□□ -0.71
XRCC3-211ENST00000555055 C15orf53Q8NAA6 179 aa10.64□□□□□ -0.71
XRCC3-211ENST00000555055 FAM104AQ969W3 186 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms