RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 COL5A1P20908 1838 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-216ENST00000555002 NDUFV3P56181 108 aaKnown RBP5.23□□□□□ -1.57
SYNE2-216ENST00000555002 SPATA12Q7Z6I5 190 aa5.23□□□□□ -1.57
SYNE2-216ENST00000555002 PLA2G2AP14555 144 aa5.23□□□□□ -1.57
SYNE2-216ENST00000555002 SYCNQ0VAF6 134 aa5.23□□□□□ -1.57
SYNE2-216ENST00000555002 POM121L12Q8N7R1 296 aa5.23□□□□□ -1.57
SYNE2-216ENST00000555002 CCKP06307 115 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 UNQ9165/PRO28630Q6UXU0 137 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 PIP4P1Q86T03 277 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 TRAV10A0A0B4J240 114 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 LY6LH3BQJ8 138 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 TP53TG3Q9ULZ0 132 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 INSL3P51460 131 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 TCL1BO95988 128 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 ADORA2A-AS1P86434 159 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 NUPR2A6NF83 97 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 IGF1P05019 195 aa5.22□□□□□ -1.57
SYNE2-216ENST00000555002 ESRGQ1W209 222 aa5.21□□□□□ -1.58
SYNE2-216ENST00000555002 CDPF1Q6NVV7 123 aa5.21□□□□□ -1.58
SYNE2-216ENST00000555002 V9GYY9 64 aa5.21□□□□□ -1.58
SYNE2-216ENST00000555002 IGLC6P0CF74 106 aa5.21□□□□□ -1.58
SYNE2-216ENST00000555002 A6NDX4 124 aa5.21□□□□□ -1.58
SYNE2-216ENST00000555002 LOC100131303A0A0U1RQF7 123 aa5.21□□□□□ -1.58
SYNE2-216ENST00000555002 LYRM9A8MSI8 78 aa5.21□□□□□ -1.58
SYNE2-216ENST00000555002 SPANXB1Q9NS25 103 aaPredicted RBP5.21□□□□□ -1.58
SYNE2-216ENST00000555002 THSD7BQ9C0I4 1608 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 A0A0J9YX75 114 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 H3BT86 120 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 K7EMT4 169 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 TRBV27A0A0K0K1C4 114 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 NANOS2P60321 138 aaKnown RBP5.2□□□□□ -1.58
SYNE2-216ENST00000555002 ZFAND3Q9H8U3 227 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 ANKRD17O75179 2603 aaKnown RBP5.2□□□□□ -1.58
SYNE2-216ENST00000555002 CTRLP40313 264 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 C22orf34Q6ZV56 151 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 A0A0J9YXY3 114 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 E9PLD3 99 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 PLA2G2CQ5R387 149 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 ATP5EP2Q5VTU8 51 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 C11orf53Q8IXP5 236 aa5.2□□□□□ -1.58
SYNE2-216ENST00000555002 IGLV2-11P01706 119 aa5.19□□□□□ -1.58
SYNE2-216ENST00000555002 DHRS4-AS1Q9P1J3 65 aa5.19□□□□□ -1.58
SYNE2-216ENST00000555002 LINC00322Q6ZN03 302 aaPredicted RBP5.19□□□□□ -1.58
SYNE2-216ENST00000555002 LINC00643Q86TS7 51 aa5.19□□□□□ -1.58
SYNE2-216ENST00000555002 Q6Q795 121 aa5.19□□□□□ -1.58
SYNE2-216ENST00000555002 IGLV2-8P01709 118 aa5.19□□□□□ -1.58
SYNE2-216ENST00000555002 IGHV6-1A0A0B4J1U7 121 aa5.19□□□□□ -1.58
SYNE2-216ENST00000555002 LOC107984640A0A0U1RRK4 108 aa5.19□□□□□ -1.58
SYNE2-216ENST00000555002 KPRPQ5T749 579 aaPredicted RBP5.19□□□□□ -1.58
SYNE2-216ENST00000555002 CPAMD8Q8IZJ3 1885 aa5.19□□□□□ -1.58
SYNE2-216ENST00000555002 IGLV5-52A0A0A0MRZ9 124 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 FAM19A3Q7Z5A8 133 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 C20orf173Q96LM9 149 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 TRBV6-5A0A0K0K1A5 114 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 SHISA2Q6UWI4 295 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 PATE2Q6UY27 113 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 HIGD1BQ9P298 99 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 CELA1Q9UNI1 258 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 IGLV2-14P01704 120 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 MT-ATP8P03928 68 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 LY6G6DO95868 133 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 ZNF843Q8N446 348 aa5.18□□□□□ -1.58
SYNE2-216ENST00000555002 DAZAP2Q15038 168 aaPredicted RBP5.18□□□□□ -1.58
SYNE2-216ENST00000555002 C10orf25Q5T742 122 aa5.17□□□□□ -1.58
SYNE2-216ENST00000555002 Q8N7P7 452 aa5.17□□□□□ -1.58
SYNE2-216ENST00000555002 C20orf203Q8NBC4 194 aa5.17□□□□□ -1.58
SYNE2-216ENST00000555002 BBC3Q96PG8 261 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-216ENST00000555002 NUPR1O60356 82 aa5.17□□□□□ -1.58
SYNE2-216ENST00000555002 TDRG1Q3Y452 100 aa5.17□□□□□ -1.58
SYNE2-216ENST00000555002 CLUHP3Q96NS8 147 aa5.17□□□□□ -1.58
SYNE2-216ENST00000555002 SMIM9A6NGZ8 99 aa5.17□□□□□ -1.58
SYNE2-216ENST00000555002 FSHBP01225 129 aa5.17□□□□□ -1.58
SYNE2-216ENST00000555002 MIFP14174 115 aa5.17□□□□□ -1.58
SYNE2-216ENST00000555002 PLA2G2EQ9NZK7 142 aa5.17□□□□□ -1.58
SYNE2-216ENST00000555002 USP9YO00507 2555 aaPredicted RBP5.16□□□□□ -1.58
SYNE2-216ENST00000555002 LINC01548A6NM66 108 aa5.16□□□□□ -1.58
SYNE2-216ENST00000555002 TIMM17BO60830 172 aa5.16□□□□□ -1.58
SYNE2-216ENST00000555002 NEXN-AS1Q8NBZ9 246 aa5.16□□□□□ -1.58
SYNE2-216ENST00000555002 LINC00337Q8N6G1 96 aa5.16□□□□□ -1.58
SYNE2-216ENST00000555002 CDKN2A-AS1Q9UH64 79 aa5.16□□□□□ -1.58
SYNE2-216ENST00000555002 ATP5EP56381 51 aaPredicted RBP5.16□□□□□ -1.58
SYNE2-216ENST00000555002 CCDC140Q96MF4 163 aa5.16□□□□□ -1.58
SYNE2-216ENST00000555002 TRBV7-6A0A0J9YX20 115 aa5.16□□□□□ -1.58
SYNE2-216ENST00000555002 COA6Q5JTJ3 125 aaKnown RBP5.16□□□□□ -1.58
SYNE2-216ENST00000555002 WFDC10AQ9H1F0 79 aa5.15□□□□□ -1.58
SYNE2-216ENST00000555002 FASNP49327 2511 aaKnown RBP5.15□□□□□ -1.58
SYNE2-216ENST00000555002 CFAP126Q5VTH2 177 aa5.15□□□□□ -1.58
SYNE2-216ENST00000555002 C1orf147Q96MC9 270 aaPredicted RBP5.15□□□□□ -1.58
SYNE2-216ENST00000555002 FAM167A-AS1Q96KT0 104 aa5.15□□□□□ -1.58
SYNE2-216ENST00000555002 TMEM89A2RUT3 159 aa5.15□□□□□ -1.59
SYNE2-216ENST00000555002 C6orf99Q4VX62 202 aa5.15□□□□□ -1.59
SYNE2-216ENST00000555002 C19orf71A6NCJ1 209 aa5.15□□□□□ -1.59
SYNE2-216ENST00000555002 DEFB114Q30KQ6 69 aa5.15□□□□□ -1.59
SYNE2-216ENST00000555002 LINC00474Q9P2X8 69 aa5.15□□□□□ -1.59
SYNE2-216ENST00000555002 SERTAD4-AS1Q5TG53 156 aa5.15□□□□□ -1.59
SYNE2-216ENST00000555002 LINC01556Q5JQF7 62 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 M0R378 163 aa5.14□□□□□ -1.59
SYNE2-216ENST00000555002 RPL28P46779 137 aaKnown RBP5.14□□□□□ -1.59
SYNE2-216ENST00000555002 PROK1P58294 105 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms