RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 GAGE12GP0CL81 117 aa8.68□□□□□ -1.02
XRCC3-208ENST00000554811 GAGE12IP0CL82 117 aa8.68□□□□□ -1.02
XRCC3-208ENST00000554811 PRIMA1Q86XR5 153 aa8.68□□□□□ -1.02
XRCC3-208ENST00000554811 INSP01308 110 aa8.68□□□□□ -1.02
XRCC3-208ENST00000554811 Q9H8V8 135 aa8.68□□□□□ -1.02
XRCC3-208ENST00000554811 IGHV3-33P01772 117 aa8.68□□□□□ -1.02
XRCC3-208ENST00000554811 ADAMTSL4-AS1Q5T5F5 129 aa8.68□□□□□ -1.02
XRCC3-208ENST00000554811 CITED2Q99967 270 aaPredicted RBP8.68□□□□□ -1.02
XRCC3-208ENST00000554811 NOP10Q9NPE3 64 aaKnown RBP8.68□□□□□ -1.02
XRCC3-208ENST00000554811 RBMY1BA6NDE4 496 aaKnown RBP8.67□□□□□ -1.02
XRCC3-208ENST00000554811 RBMY1EA6NEQ0 496 aaKnown RBP8.67□□□□□ -1.02
XRCC3-208ENST00000554811 RBMY1DP0C7P1 496 aaKnown RBP8.67□□□□□ -1.02
XRCC3-208ENST00000554811 RPL32P62910 135 aaKnown RBP8.67□□□□□ -1.02
XRCC3-208ENST00000554811 A0A096LPF7 62 aa8.67□□□□□ -1.02
XRCC3-208ENST00000554811 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.67□□□□□ -1.02
XRCC3-208ENST00000554811 ATXN8Q156A1 80 aa8.67□□□□□ -1.02
XRCC3-208ENST00000554811 TRIAP1O43715 76 aa8.67□□□□□ -1.02
XRCC3-208ENST00000554811 BRI3O95415 125 aa8.67□□□□□ -1.02
XRCC3-208ENST00000554811 TEX29Q8N6K0 151 aa8.67□□□□□ -1.02
XRCC3-208ENST00000554811 CARD19Q96LW7 228 aa8.67□□□□□ -1.02
XRCC3-208ENST00000554811 ZNF702PQ9H963 129 aa8.67□□□□□ -1.02
XRCC3-208ENST00000554811 MAP6D1Q9H9H5 199 aa8.67□□□□□ -1.02
XRCC3-208ENST00000554811 CIRBPQ14011 172 aaKnown RBP8.66□□□□□ -1.02
XRCC3-208ENST00000554811 TTC32Q5I0X7 151 aa8.66□□□□□ -1.02
XRCC3-208ENST00000554811 Q6ZTI0 123 aa8.66□□□□□ -1.02
XRCC3-208ENST00000554811 PLA2G2AP14555 144 aa8.66□□□□□ -1.02
XRCC3-208ENST00000554811 ITPR2Q14571 2701 aa8.66□□□□□ -1.02
XRCC3-208ENST00000554811 DEFB130BP0DP73 79 aa8.66□□□□□ -1.02
XRCC3-208ENST00000554811 DEFB130AP0DP74 79 aa8.66□□□□□ -1.02
XRCC3-208ENST00000554811 LINC01620Q4KN68 170 aa8.66□□□□□ -1.02
XRCC3-208ENST00000554811 CLPSL2Q6UWE3 100 aa8.66□□□□□ -1.02
XRCC3-208ENST00000554811 TRAV8-4A0A0B4J246 113 aa8.65□□□□□ -1.02
XRCC3-208ENST00000554811 NXPH4O95158 308 aa8.65□□□□□ -1.02
XRCC3-208ENST00000554811 BBC3Q96PG8 261 aaPredicted RBP8.65□□□□□ -1.02
XRCC3-208ENST00000554811 TMEM262E9PQX1 116 aa8.65□□□□□ -1.03
XRCC3-208ENST00000554811 RS1O15537 224 aa8.65□□□□□ -1.03
XRCC3-208ENST00000554811 GAGE6Q13070 117 aa8.65□□□□□ -1.03
XRCC3-208ENST00000554811 FHL3Q13643 280 aa8.65□□□□□ -1.03
XRCC3-208ENST00000554811 TRBV6-5A0A0K0K1A5 114 aa8.64□□□□□ -1.03
XRCC3-208ENST00000554811 HTN3P15516 51 aa8.64□□□□□ -1.03
XRCC3-208ENST00000554811 TRGV4A0A0C4DH28 118 aa8.64□□□□□ -1.03
XRCC3-208ENST00000554811 UBE2D3P61077 147 aa8.64□□□□□ -1.03
XRCC3-208ENST00000554811 UBE2D2P62837 147 aa8.64□□□□□ -1.03
XRCC3-208ENST00000554811 POM121L12Q8N7R1 296 aa8.64□□□□□ -1.03
XRCC3-208ENST00000554811 OR13C6PQ8NH95 151 aa8.64□□□□□ -1.03
XRCC3-208ENST00000554811 CHCHD5Q9BSY4 110 aa8.64□□□□□ -1.03
XRCC3-208ENST00000554811 SETXQ7Z333 2677 aaKnown RBP8.64□□□□□ -1.03
XRCC3-208ENST00000554811 RPL36AP83881 106 aaKnown RBP8.64□□□□□ -1.03
XRCC3-208ENST00000554811 ZFAND6Q6FIF0 208 aa8.64□□□□□ -1.03
XRCC3-208ENST00000554811 RPL36ALQ969Q0 106 aaKnown RBP8.64□□□□□ -1.03
XRCC3-208ENST00000554811 ICOSQ9Y6W8 199 aa8.64□□□□□ -1.03
XRCC3-208ENST00000554811 MAST4O15021 2626 aa8.63□□□□□ -1.03
XRCC3-208ENST00000554811 IGHV1-58A0A0C4DH39 117 aa8.63□□□□□ -1.03
XRCC3-208ENST00000554811 EIF4EBP3O60516 100 aaPredicted RBP8.63□□□□□ -1.03
XRCC3-208ENST00000554811 PFN2P35080 140 aa8.63□□□□□ -1.03
XRCC3-208ENST00000554811 DSCR9P59020 149 aa8.63□□□□□ -1.03
XRCC3-208ENST00000554811 GAGE2BQ13066 116 aa8.63□□□□□ -1.03
XRCC3-208ENST00000554811 GAGE2EQ4V326 116 aa8.63□□□□□ -1.03
XRCC3-208ENST00000554811 GAGE2DQ9UEU5 116 aa8.63□□□□□ -1.03
XRCC3-208ENST00000554811 LOC100131303A0A0U1RQF7 123 aa8.62□□□□□ -1.03
XRCC3-208ENST00000554811 RNASE1P07998 156 aaKnown RBP8.62□□□□□ -1.03
XRCC3-208ENST00000554811 LINC00694P0DN24 101 aa8.62□□□□□ -1.03
XRCC3-208ENST00000554811 IGHV4-31P0DP07 118 aa8.62□□□□□ -1.03
XRCC3-208ENST00000554811 TMEM263Q8WUH6 116 aaKnown RBP8.62□□□□□ -1.03
XRCC3-208ENST00000554811 UBE2WQ96B02 151 aa8.62□□□□□ -1.03
XRCC3-208ENST00000554811 SPATA25Q9BR10 227 aa8.62□□□□□ -1.03
XRCC3-208ENST00000554811 CDIP1Q9H305 208 aa8.62□□□□□ -1.03
XRCC3-208ENST00000554811 COX6A2Q02221 97 aa8.62□□□□□ -1.03
XRCC3-208ENST00000554811 ESM1Q9NQ30 184 aa8.62□□□□□ -1.03
XRCC3-208ENST00000554811 APCP25054 2843 aa8.62□□□□□ -1.03
XRCC3-208ENST00000554811 LINC00158P58513 81 aa8.61□□□□□ -1.03
XRCC3-208ENST00000554811 PIK3CD-AS1Q5SR53 167 aa8.61□□□□□ -1.03
XRCC3-208ENST00000554811 Q6YL49 198 aa8.61□□□□□ -1.03
XRCC3-208ENST00000554811 VSIG2Q96IQ7 327 aa8.61□□□□□ -1.03
XRCC3-208ENST00000554811 WFDC11Q8NEX6 87 aa8.61□□□□□ -1.03
XRCC3-208ENST00000554811 KLK9Q2XQG4 91 aa8.6□□□□□ -1.03
XRCC3-208ENST00000554811 C15orf53Q8NAA6 179 aa8.6□□□□□ -1.03
XRCC3-208ENST00000554811 AMELXQ99217 191 aa8.6□□□□□ -1.03
XRCC3-208ENST00000554811 PPDPFQ9H3Y8 114 aa8.6□□□□□ -1.03
XRCC3-208ENST00000554811 UBE2D4Q9Y2X8 147 aa8.6□□□□□ -1.03
XRCC3-208ENST00000554811 PF4P02776 101 aa8.6□□□□□ -1.03
XRCC3-208ENST00000554811 MGAM2Q2M2H8 2515 aa8.6□□□□□ -1.03
XRCC3-208ENST00000554811 DEFB114Q30KQ6 69 aa8.6□□□□□ -1.03
XRCC3-208ENST00000554811 C5orf38Q86SI9 138 aa8.6□□□□□ -1.03
XRCC3-208ENST00000554811 TMEM101Q96IK0 257 aa8.6□□□□□ -1.03
XRCC3-208ENST00000554811 CCL24O00175 119 aa8.59□□□□□ -1.03
XRCC3-208ENST00000554811 CRLF1O75462 422 aa8.59□□□□□ -1.03
XRCC3-208ENST00000554811 CHCHD7Q9BUK0 85 aa8.59□□□□□ -1.03
XRCC3-208ENST00000554811 TRAV4A0A0B4J268 109 aa8.59□□□□□ -1.03
XRCC3-208ENST00000554811 UBR5O95071 2799 aaPredicted RBP8.58□□□□□ -1.04
XRCC3-208ENST00000554811 TMEM89A2RUT3 159 aa8.58□□□□□ -1.04
XRCC3-208ENST00000554811 DEFB4AO15263 64 aa8.58□□□□□ -1.04
XRCC3-208ENST00000554811 Q9HAA7 133 aa8.58□□□□□ -1.04
XRCC3-208ENST00000554811 SPANXA1Q9NS26 97 aa8.58□□□□□ -1.04
XRCC3-208ENST00000554811 MIAQ16674 131 aa8.58□□□□□ -1.04
XRCC3-208ENST00000554811 ODF3L2Q3SX64 289 aa8.58□□□□□ -1.04
XRCC3-208ENST00000554811 ODF3Q96PU9 254 aa8.58□□□□□ -1.04
XRCC3-208ENST00000554811 F8P00451 2351 aa8.58□□□□□ -1.04
XRCC3-208ENST00000554811 J3QLI3 93 aa8.57□□□□□ -1.04
XRCC3-208ENST00000554811 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms