RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SMIM9A6NGZ8 99 aa10.4□□□□□ -0.75
VTI1B-204ENST00000554659 ANKHD1Q8IWZ3 2542 aaKnown RBP10.4□□□□□ -0.75
VTI1B-204ENST00000554659 PLXNB1O43157 2135 aa10.4□□□□□ -0.75
VTI1B-204ENST00000554659 ZFHX2Q9C0A1 2572 aaPredicted RBP10.39□□□□□ -0.75
VTI1B-204ENST00000554659 PTPN13Q12923 2485 aa10.39□□□□□ -0.75
VTI1B-204ENST00000554659 WFDC10BQ8IUB3 73 aa10.39□□□□□ -0.75
VTI1B-204ENST00000554659 LYRM9A8MSI8 78 aa10.39□□□□□ -0.75
VTI1B-204ENST00000554659 K7ERS5 55 aa10.38□□□□□ -0.75
VTI1B-204ENST00000554659 Q8N6K4 173 aa10.38□□□□□ -0.75
VTI1B-204ENST00000554659 NDUFA7O95182 113 aa10.38□□□□□ -0.75
VTI1B-204ENST00000554659 CHCHD10Q8WYQ3 142 aaPredicted RBP10.38□□□□□ -0.75
VTI1B-204ENST00000554659 LRRC75A-AS1Q8N1F1 130 aa10.38□□□□□ -0.75
VTI1B-204ENST00000554659 SNURFQ9Y675 71 aa10.37□□□□□ -0.75
VTI1B-204ENST00000554659 HIVEP2P31629 2446 aa10.37□□□□□ -0.75
VTI1B-204ENST00000554659 C11orf71Q6IPW1 123 aa10.37□□□□□ -0.75
VTI1B-204ENST00000554659 SERP2Q8N6R1 65 aa10.37□□□□□ -0.75
VTI1B-204ENST00000554659 CCKP06307 115 aa10.37□□□□□ -0.75
VTI1B-204ENST00000554659 RNASE3P12724 160 aaKnown RBP10.37□□□□□ -0.75
VTI1B-204ENST00000554659 FAM222AQ5U5X8 452 aa10.36□□□□□ -0.75
VTI1B-204ENST00000554659 FAM19A1Q7Z5A9 133 aa10.36□□□□□ -0.75
VTI1B-204ENST00000554659 C1orf158Q8N1D5 194 aa10.36□□□□□ -0.75
VTI1B-204ENST00000554659 TRBV6-4A0A1B0GX49 114 aa10.36□□□□□ -0.75
VTI1B-204ENST00000554659 TSHBP01222 138 aa10.36□□□□□ -0.75
VTI1B-204ENST00000554659 XAGE1AQ9HD64 81 aa10.36□□□□□ -0.75
VTI1B-204ENST00000554659 C6orf99Q4VX62 202 aa10.36□□□□□ -0.75
VTI1B-204ENST00000554659 CNFNQ9BYD5 112 aa10.36□□□□□ -0.75
VTI1B-204ENST00000554659 PCNX3Q9H6A9 2034 aa10.36□□□□□ -0.75
VTI1B-204ENST00000554659 TECTAO75443 2155 aa10.36□□□□□ -0.75
VTI1B-204ENST00000554659 TRBV6-8A0A0A6YYG3 113 aa10.35□□□□□ -0.75
VTI1B-204ENST00000554659 C19orf84I3L1E1 186 aa10.35□□□□□ -0.75
VTI1B-204ENST00000554659 C11orf21Q9P2W6 132 aa10.35□□□□□ -0.75
VTI1B-204ENST00000554659 PCDH15Q96QU1 1955 aa10.35□□□□□ -0.75
VTI1B-204ENST00000554659 A0A0J9YWU9 116 aa10.35□□□□□ -0.75
VTI1B-204ENST00000554659 LINC00310P59036 64 aa10.35□□□□□ -0.75
VTI1B-204ENST00000554659 EP400Q96L91 3159 aa10.35□□□□□ -0.75
VTI1B-204ENST00000554659 C3orf84H3BNL1 204 aa10.34□□□□□ -0.75
VTI1B-204ENST00000554659 KLLNB2CW77 178 aa10.34□□□□□ -0.75
VTI1B-204ENST00000554659 IGHV4-31P0DP07 118 aa10.34□□□□□ -0.75
VTI1B-204ENST00000554659 POLR2KP53803 58 aaKnown RBP10.34□□□□□ -0.75
VTI1B-204ENST00000554659 PRR4Q16378 134 aa10.34□□□□□ -0.75
VTI1B-204ENST00000554659 MUC22E2RYF6 1773 aaPredicted RBP10.34□□□□□ -0.75
VTI1B-204ENST00000554659 IMUPQ9GZP8 106 aa10.34□□□□□ -0.75
VTI1B-204ENST00000554659 OTOGLQ3ZCN5 2332 aa10.34□□□□□ -0.75
VTI1B-204ENST00000554659 PRR9Q5T870 116 aa10.34□□□□□ -0.75
VTI1B-204ENST00000554659 CCDC179H3BU77 68 aa10.33□□□□□ -0.76
VTI1B-204ENST00000554659 FAM19A3Q7Z5A8 133 aa10.33□□□□□ -0.76
VTI1B-204ENST00000554659 A6NED7 52 aa10.33□□□□□ -0.76
VTI1B-204ENST00000554659 DCANP1Q8TF63 244 aa10.33□□□□□ -0.76
VTI1B-204ENST00000554659 LST1O00453 97 aa10.33□□□□□ -0.76
VTI1B-204ENST00000554659 PROK1P58294 105 aa10.33□□□□□ -0.76
VTI1B-204ENST00000554659 NDUFC1O43677 76 aa10.32□□□□□ -0.76
VTI1B-204ENST00000554659 A0A087WZ39 114 aa10.32□□□□□ -0.76
VTI1B-204ENST00000554659 Q8N976 141 aa10.32□□□□□ -0.76
VTI1B-204ENST00000554659 C9orf85Q96MD7 179 aa10.32□□□□□ -0.76
VTI1B-204ENST00000554659 KLK5Q9Y337 293 aaPredicted RBP10.32□□□□□ -0.76
VTI1B-204ENST00000554659 A8MZ25 164 aa10.31□□□□□ -0.76
VTI1B-204ENST00000554659 ATP5EP56381 51 aaPredicted RBP10.31□□□□□ -0.76
VTI1B-204ENST00000554659 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
VTI1B-204ENST00000554659 PRR15LQ9BU68 103 aa10.31□□□□□ -0.76
VTI1B-204ENST00000554659 C10orf142B7Z368 130 aa10.3□□□□□ -0.76
VTI1B-204ENST00000554659 C14orf177Q52M58 125 aa10.3□□□□□ -0.76
VTI1B-204ENST00000554659 C11orf45Q8TAV5 145 aa10.3□□□□□ -0.76
VTI1B-204ENST00000554659 PRORYQ9H606 182 aa10.3□□□□□ -0.76
VTI1B-204ENST00000554659 UBE2D4Q9Y2X8 147 aa10.3□□□□□ -0.76
VTI1B-204ENST00000554659 LRCOL1A6NCL2 159 aa10.3□□□□□ -0.76
VTI1B-204ENST00000554659 COX7CP15954 63 aa10.3□□□□□ -0.76
VTI1B-204ENST00000554659 XGP55808 180 aa10.3□□□□□ -0.76
VTI1B-204ENST00000554659 WFDC13Q8IUB5 93 aa10.3□□□□□ -0.76
VTI1B-204ENST00000554659 GAS8-AS1O95177 125 aa10.29□□□□□ -0.76
VTI1B-204ENST00000554659 CRYGDP07320 174 aa10.29□□□□□ -0.76
VTI1B-204ENST00000554659 Q6ZQY7 126 aa10.29□□□□□ -0.76
VTI1B-204ENST00000554659 URB1-AS1Q96HZ7 61 aa10.29□□□□□ -0.76
VTI1B-204ENST00000554659 FAM19A5Q7Z5A7 132 aaPredicted RBP10.29□□□□□ -0.76
VTI1B-204ENST00000554659 PSMG3-AS1Q96PY0 264 aa10.28□□□□□ -0.76
VTI1B-204ENST00000554659 KIAA1549Q9HCM3 1950 aa10.28□□□□□ -0.76
VTI1B-204ENST00000554659 Q6ZS46 218 aa10.28□□□□□ -0.76
VTI1B-204ENST00000554659 C10orf99Q6UWK7 81 aa10.28□□□□□ -0.76
VTI1B-204ENST00000554659 Q6ZSV7 163 aa10.27□□□□□ -0.77
VTI1B-204ENST00000554659 TTC28Q96AY4 2481 aa10.27□□□□□ -0.77
VTI1B-204ENST00000554659 UBE2D1P51668 147 aa10.27□□□□□ -0.77
VTI1B-204ENST00000554659 C1orf195Q5TG92 126 aa10.27□□□□□ -0.77
VTI1B-204ENST00000554659 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
VTI1B-204ENST00000554659 IGLV1-40P01703 118 aa10.26□□□□□ -0.77
VTI1B-204ENST00000554659 MUC6Q6W4X9 2439 aa10.26□□□□□ -0.77
VTI1B-204ENST00000554659 MIFP14174 115 aa10.26□□□□□ -0.77
VTI1B-204ENST00000554659 Q8N9L7 120 aa10.26□□□□□ -0.77
VTI1B-204ENST00000554659 IGIPA6NJ69 53 aa10.25□□□□□ -0.77
VTI1B-204ENST00000554659 IGKV2-28A0A075B6P5 120 aa10.25□□□□□ -0.77
VTI1B-204ENST00000554659 IGKV2D-28P01615 120 aa10.25□□□□□ -0.77
VTI1B-204ENST00000554659 ZNF702PQ9H963 129 aa10.25□□□□□ -0.77
VTI1B-204ENST00000554659 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
VTI1B-204ENST00000554659 CUL9Q8IWT3 2517 aa10.24□□□□□ -0.77
VTI1B-204ENST00000554659 SYCNQ0VAF6 134 aa10.24□□□□□ -0.77
VTI1B-204ENST00000554659 SPINK6Q6UWN8 80 aa10.24□□□□□ -0.77
VTI1B-204ENST00000554659 ATG2AQ2TAZ0 1938 aa10.23□□□□□ -0.77
VTI1B-204ENST00000554659 PPDPFQ9H3Y8 114 aa10.23□□□□□ -0.77
VTI1B-204ENST00000554659 LINC00694P0DN24 101 aa10.23□□□□□ -0.77
VTI1B-204ENST00000554659 LINC00526Q96FQ7 95 aa10.23□□□□□ -0.77
VTI1B-204ENST00000554659 DEFB131BA0A096LNP1 70 aa10.22□□□□□ -0.77
VTI1B-204ENST00000554659 MRGPRG-AS1Q2M3A8 158 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms