RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 SMIM2Q9BVW6 85 aa6.19□□□□□ -1.42
CHD8-206ENST00000553870 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.18□□□□□ -1.42
CHD8-206ENST00000553870 IGKV2-29A2NJV5 120 aaPredicted RBP6.18□□□□□ -1.42
CHD8-206ENST00000553870 K7EMI3 77 aa6.18□□□□□ -1.42
CHD8-206ENST00000553870 NPYP01303 97 aa6.18□□□□□ -1.42
CHD8-206ENST00000553870 RAB5AP20339 215 aa6.18□□□□□ -1.42
CHD8-206ENST00000553870 SMCPP49901 116 aaPredicted RBP6.18□□□□□ -1.42
CHD8-206ENST00000553870 C14orf177Q52M58 125 aa6.18□□□□□ -1.42
CHD8-206ENST00000553870 Q8N814 137 aa6.18□□□□□ -1.42
CHD8-206ENST00000553870 OR5A1Q8NGJ0 315 aa6.18□□□□□ -1.42
CHD8-206ENST00000553870 BAALCQ8WXS3 180 aa6.18□□□□□ -1.42
CHD8-206ENST00000553870 TIMM21Q9BVV7 248 aa6.18□□□□□ -1.42
CHD8-206ENST00000553870 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
CHD8-206ENST00000553870 CCL25O15444 150 aa6.17□□□□□ -1.42
CHD8-206ENST00000553870 MT-ND6P03923 174 aa6.17□□□□□ -1.42
CHD8-206ENST00000553870 DGAT2L7PQ6IED9 249 aa6.17□□□□□ -1.42
CHD8-206ENST00000553870 MAP1LC3AQ9H492 121 aa6.17□□□□□ -1.42
CHD8-206ENST00000553870 G0S2P27469 103 aa6.16□□□□□ -1.42
CHD8-206ENST00000553870 KRTAP26-1Q6PEX3 210 aa6.16□□□□□ -1.42
CHD8-206ENST00000553870 ZNF664Q8N3J9 261 aa6.16□□□□□ -1.42
CHD8-206ENST00000553870 Q8N8P6 123 aa6.16□□□□□ -1.42
CHD8-206ENST00000553870 CDC42SE2Q9NRR3 84 aa6.16□□□□□ -1.42
CHD8-206ENST00000553870 PKHD1P08F94 4074 aa6.15□□□□□ -1.42
CHD8-206ENST00000553870 DYNC1H1Q14204 4646 aaKnown RBP6.15□□□□□ -1.42
CHD8-206ENST00000553870 IGLV5-52A0A0A0MRZ9 124 aa6.15□□□□□ -1.42
CHD8-206ENST00000553870 CDK2AP2O75956 126 aa6.15□□□□□ -1.42
CHD8-206ENST00000553870 GCSHP23434 173 aa6.15□□□□□ -1.42
CHD8-206ENST00000553870 CLPSL2Q6UWE3 100 aa6.15□□□□□ -1.42
CHD8-206ENST00000553870 NXT2Q9NPJ8 142 aaKnown RBP6.15□□□□□ -1.42
CHD8-206ENST00000553870 SPANXA1Q9NS26 97 aa6.15□□□□□ -1.42
CHD8-206ENST00000553870 UBE2D4Q9Y2X8 147 aa6.15□□□□□ -1.42
CHD8-206ENST00000553870 IGLV10-54A0A075B6I4 117 aa6.14□□□□□ -1.43
CHD8-206ENST00000553870 WFDC2Q14508 124 aa6.14□□□□□ -1.43
CHD8-206ENST00000553870 SS18Q15532 418 aa6.14□□□□□ -1.43
CHD8-206ENST00000553870 ORMDL2Q53FV1 153 aa6.14□□□□□ -1.43
CHD8-206ENST00000553870 CFAP161Q6P656 301 aa6.14□□□□□ -1.43
CHD8-206ENST00000553870 LOC389332A0A1B0GUA5 103 aa6.13□□□□□ -1.43
CHD8-206ENST00000553870 LINC00959A0A1B0GUT2 108 aa6.13□□□□□ -1.43
CHD8-206ENST00000553870 C1orf196B1AJZ1 125 aa6.13□□□□□ -1.43
CHD8-206ENST00000553870 USP17L23D6RBM5 183 aa6.13□□□□□ -1.43
CHD8-206ENST00000553870 LECT2O14960 151 aa6.13□□□□□ -1.43
CHD8-206ENST00000553870 MRPS36P82909 103 aaKnown RBP6.13□□□□□ -1.43
CHD8-206ENST00000553870 CHCHD10Q8WYQ3 142 aaPredicted RBP6.13□□□□□ -1.43
CHD8-206ENST00000553870 PYGO1Q9Y3Y4 419 aa6.13□□□□□ -1.43
CHD8-206ENST00000553870 IGKV3OR2-268A0A0C4DH90 116 aa6.12□□□□□ -1.43
CHD8-206ENST00000553870 GAGE12HA6NDE8 117 aa6.12□□□□□ -1.43
CHD8-206ENST00000553870 LINC01549A6NIU2 74 aa6.12□□□□□ -1.43
CHD8-206ENST00000553870 NPSP0C0P6 89 aa6.12□□□□□ -1.43
CHD8-206ENST00000553870 FABP9Q0Z7S8 132 aa6.12□□□□□ -1.43
CHD8-206ENST00000553870 KIAA1644Q3SXP7 199 aa6.12□□□□□ -1.43
CHD8-206ENST00000553870 CD164L2Q6UWJ8 174 aa6.12□□□□□ -1.43
CHD8-206ENST00000553870 ALKBH7Q9BT30 221 aaPredicted RBP6.12□□□□□ -1.43
CHD8-206ENST00000553870 MRPL18Q9H0U6 180 aaKnown RBP6.12□□□□□ -1.43
CHD8-206ENST00000553870 TGIF2-C20orf24A0A0A6YYL0 155 aa6.11□□□□□ -1.43
CHD8-206ENST00000553870 IFI27P40305 119 aaPredicted RBP6.11□□□□□ -1.43
CHD8-206ENST00000553870 RPL39P62891 51 aaKnown RBP6.11□□□□□ -1.43
CHD8-206ENST00000553870 SLC7A5P1Q8MH63 180 aa6.11□□□□□ -1.43
CHD8-206ENST00000553870 PRSS3P2Q8NHM4 247 aa6.11□□□□□ -1.43
CHD8-206ENST00000553870 SMCO4Q9NRQ5 59 aa6.11□□□□□ -1.43
CHD8-206ENST00000553870 CYSLTR1Q9Y271 337 aa6.11□□□□□ -1.43
CHD8-206ENST00000553870 TRAPPC1Q9Y5R8 145 aa6.11□□□□□ -1.43
CHD8-206ENST00000553870 DNAH5Q8TE73 4624 aa6.11□□□□□ -1.43
CHD8-206ENST00000553870 LRP1BQ9NZR2 4599 aa6.11□□□□□ -1.43
CHD8-206ENST00000553870 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.1□□□□□ -1.43
CHD8-206ENST00000553870 LINC01546A6NGU7 62 aa6.1□□□□□ -1.43
CHD8-206ENST00000553870 PRSS1P07477 247 aa6.1□□□□□ -1.43
CHD8-206ENST00000553870 KRTAP10-1P60331 282 aa6.1□□□□□ -1.43
CHD8-206ENST00000553870 FOXI1Q12951 378 aa6.1□□□□□ -1.43
CHD8-206ENST00000553870 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
CHD8-206ENST00000553870 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
CHD8-206ENST00000553870 AP5S1Q9NUS5 200 aa6.1□□□□□ -1.43
CHD8-206ENST00000553870 FUSP35637 526 aaKnown RBP eCLIP6.09□□□□□ -1.43
CHD8-206ENST00000553870 XCL1P47992 114 aa6.09□□□□□ -1.43
CHD8-206ENST00000553870 CNBPP62633 177 aaKnown RBP6.09□□□□□ -1.43
CHD8-206ENST00000553870 C2orf66Q6UXQ4 117 aa6.09□□□□□ -1.43
CHD8-206ENST00000553870 FAM104AQ969W3 186 aa6.09□□□□□ -1.43
CHD8-206ENST00000553870 TMEM141Q96I45 108 aa6.09□□□□□ -1.43
CHD8-206ENST00000553870 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.08□□□□□ -1.44
CHD8-206ENST00000553870 TRAV13-1A0A0B4J241 112 aa6.08□□□□□ -1.44
CHD8-206ENST00000553870 IGHV1-58A0A0C4DH39 117 aa6.08□□□□□ -1.44
CHD8-206ENST00000553870 hDV102S1A0JD36 115 aa6.08□□□□□ -1.44
CHD8-206ENST00000553870 PAPPA-AS1Q5QFB9 102 aa6.08□□□□□ -1.44
CHD8-206ENST00000553870 Q6ZUT4 128 aa6.08□□□□□ -1.44
CHD8-206ENST00000553870 C9orf163Q8N9P6 203 aa6.08□□□□□ -1.44
CHD8-206ENST00000553870 IGLV4-3A0A075B6K6 122 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 GVQW2A0A096LPI5 108 aaPredicted RBP6.07□□□□□ -1.44
CHD8-206ENST00000553870 IGIPA6NJ69 53 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 COX7A2LO14548 114 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 APOMO95445 188 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 RAB5BP61020 215 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 Q6ZN92 141 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 FA2HQ7L5A8 372 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 C15orf56Q8N910 161 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 TOMM6Q96B49 74 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 TIMM17AQ99595 171 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 VCX2Q9H322 139 aa6.07□□□□□ -1.44
CHD8-206ENST00000553870 LINC00614P0C842 121 aa6.06□□□□□ -1.44
CHD8-206ENST00000553870 MALP21145 153 aa6.06□□□□□ -1.44
CHD8-206ENST00000553870 XGP55808 180 aa6.06□□□□□ -1.44
CHD8-206ENST00000553870 RNASE13Q5GAN3 156 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms