RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 CDC42SE2Q9NRR3 84 aa6.61□□□□□ -1.35
SNRPF-205ENST00000553192 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
SNRPF-205ENST00000553192 APCSP02743 223 aa6.6□□□□□ -1.35
SNRPF-205ENST00000553192 IGLC6P0CF74 106 aa6.6□□□□□ -1.35
SNRPF-205ENST00000553192 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
SNRPF-205ENST00000553192 OR2D3Q8NGH3 330 aa6.6□□□□□ -1.35
SNRPF-205ENST00000553192 PPP1R1CQ8WVI7 109 aa6.6□□□□□ -1.35
SNRPF-205ENST00000553192 ACTR3CQ9C0K3 210 aaPredicted RBP6.6□□□□□ -1.35
SNRPF-205ENST00000553192 SMDT1Q9H4I9 107 aa6.6□□□□□ -1.35
SNRPF-205ENST00000553192 C6orf48Q9UBA6 75 aa6.6□□□□□ -1.35
SNRPF-205ENST00000553192 LYRM1O43325 122 aa6.59□□□□□ -1.35
SNRPF-205ENST00000553192 NUPR1O60356 82 aa6.59□□□□□ -1.35
SNRPF-205ENST00000553192 NOL3O60936 208 aaKnown RBP6.59□□□□□ -1.35
SNRPF-205ENST00000553192 H2AFB2P0C5Z0 115 aa6.59□□□□□ -1.35
SNRPF-205ENST00000553192 C5orf38Q86SI9 138 aa6.59□□□□□ -1.35
SNRPF-205ENST00000553192 GATD1Q8NB37 220 aa6.59□□□□□ -1.35
SNRPF-205ENST00000553192 TMEM101Q96IK0 257 aa6.59□□□□□ -1.35
SNRPF-205ENST00000553192 BTF3L4Q96K17 158 aa6.59□□□□□ -1.35
SNRPF-205ENST00000553192 MPC2O95563 127 aa6.58□□□□□ -1.36
SNRPF-205ENST00000553192 H2BFSP57053 126 aa6.58□□□□□ -1.36
SNRPF-205ENST00000553192 C9orf129Q5T035 196 aaKnown RBP6.58□□□□□ -1.36
SNRPF-205ENST00000553192 RPL39LQ96EH5 51 aaKnown RBP6.58□□□□□ -1.36
SNRPF-205ENST00000553192 PSMG3Q9BT73 122 aaPredicted RBP6.58□□□□□ -1.36
SNRPF-205ENST00000553192 NKX6-2Q9C056 277 aaPredicted RBP6.58□□□□□ -1.36
SNRPF-205ENST00000553192 CCDC160A6NGH7 325 aa6.57□□□□□ -1.36
SNRPF-205ENST00000553192 RPL28P46779 137 aaKnown RBP6.57□□□□□ -1.36
SNRPF-205ENST00000553192 FAM229BQ4G0N7 80 aa6.57□□□□□ -1.36
SNRPF-205ENST00000553192 UNQ6190/PRO20217Q6UXQ8 127 aa6.57□□□□□ -1.36
SNRPF-205ENST00000553192 TPPP3Q9BW30 176 aa6.57□□□□□ -1.36
SNRPF-205ENST00000553192 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
SNRPF-205ENST00000553192 C1orf196B1AJZ1 125 aa6.56□□□□□ -1.36
SNRPF-205ENST00000553192 INMT-MINDY4F8WBC2 141 aa6.56□□□□□ -1.36
SNRPF-205ENST00000553192 MBP02144 154 aa6.56□□□□□ -1.36
SNRPF-205ENST00000553192 AKR1C3P42330 323 aa6.56□□□□□ -1.36
SNRPF-205ENST00000553192 TNFSF18Q9UNG2 199 aa6.56□□□□□ -1.36
SNRPF-205ENST00000553192 DEFA1P59665 94 aa6.55□□□□□ -1.36
SNRPF-205ENST00000553192 SERF2P84101 59 aa6.55□□□□□ -1.36
SNRPF-205ENST00000553192 MZT2BQ6NZ67 158 aa6.55□□□□□ -1.36
SNRPF-205ENST00000553192 MRPL52Q86TS9 123 aaKnown RBP6.55□□□□□ -1.36
SNRPF-205ENST00000553192 M0R2T5 61 aa6.54□□□□□ -1.36
SNRPF-205ENST00000553192 NDUFA1O15239 70 aa6.54□□□□□ -1.36
SNRPF-205ENST00000553192 BCE1O60756 84 aa6.54□□□□□ -1.36
SNRPF-205ENST00000553192 CTRLP40313 264 aa6.54□□□□□ -1.36
SNRPF-205ENST00000553192 TMEM241Q24JQ0 296 aa6.54□□□□□ -1.36
SNRPF-205ENST00000553192 OR10D4PQ8NGN7 298 aa6.54□□□□□ -1.36
SNRPF-205ENST00000553192 ALG5Q9Y673 324 aa6.54□□□□□ -1.36
SNRPF-205ENST00000553192 CTXND1A0A1B0GTU2 59 aa6.53□□□□□ -1.36
SNRPF-205ENST00000553192 SDHAF1A6NFY7 115 aa6.53□□□□□ -1.36
SNRPF-205ENST00000553192 F8WDY8 70 aa6.53□□□□□ -1.36
SNRPF-205ENST00000553192 TRGC1P0CF51 173 aa6.53□□□□□ -1.36
SNRPF-205ENST00000553192 BAGE2Q86Y30 109 aa6.53□□□□□ -1.36
SNRPF-205ENST00000553192 ORAOV1Q8WV07 137 aa6.53□□□□□ -1.36
SNRPF-205ENST00000553192 TCEAL7Q9BRU2 100 aa6.53□□□□□ -1.36
SNRPF-205ENST00000553192 C22orf24Q9Y442 160 aa6.53□□□□□ -1.36
SNRPF-205ENST00000553192 IGKV2D-26A0A0A0MRZ7 120 aa6.52□□□□□ -1.37
SNRPF-205ENST00000553192 FHITP49789 147 aa6.52□□□□□ -1.37
SNRPF-205ENST00000553192 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
SNRPF-205ENST00000553192 KRTAP13-1Q8IUC0 172 aa6.52□□□□□ -1.37
SNRPF-205ENST00000553192 TRAV13-1A0A0B4J241 112 aa6.51□□□□□ -1.37
SNRPF-205ENST00000553192 KRTAP4-16G5E9R7 235 aaPredicted RBP6.51□□□□□ -1.37
SNRPF-205ENST00000553192 PET100P0DJ07 73 aa6.51□□□□□ -1.37
SNRPF-205ENST00000553192 STOML3Q8TAV4 291 aa6.51□□□□□ -1.37
SNRPF-205ENST00000553192 MRAP2Q96G30 205 aa6.51□□□□□ -1.37
SNRPF-205ENST00000553192 I3L3M4 83 aa6.5□□□□□ -1.37
SNRPF-205ENST00000553192 TNFRSF6BO95407 300 aa6.5□□□□□ -1.37
SNRPF-205ENST00000553192 PMCHP20382 165 aa6.5□□□□□ -1.37
SNRPF-205ENST00000553192 CST9LP1Q5W188 147 aa6.5□□□□□ -1.37
SNRPF-205ENST00000553192 LYZL1Q6UWQ5 148 aa6.5□□□□□ -1.37
SNRPF-205ENST00000553192 C3orf22Q8N5N4 141 aa6.5□□□□□ -1.37
SNRPF-205ENST00000553192 RNASE7Q9H1E1 156 aaKnown RBP6.5□□□□□ -1.37
SNRPF-205ENST00000553192 TMEM242Q9NWH2 141 aa6.5□□□□□ -1.37
SNRPF-205ENST00000553192 NDUFC2-KCTD14E9PQ53 114 aa6.49□□□□□ -1.37
SNRPF-205ENST00000553192 S100A9P06702 114 aaKnown RBP6.49□□□□□ -1.37
SNRPF-205ENST00000553192 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
SNRPF-205ENST00000553192 SCO2A0A1W2PP80 73 aa6.48□□□□□ -1.37
SNRPF-205ENST00000553192 F2Z2F3 143 aa6.48□□□□□ -1.37
SNRPF-205ENST00000553192 FOXA3P55318 350 aaPredicted RBP6.48□□□□□ -1.37
SNRPF-205ENST00000553192 KIAA0087Q14695 138 aa6.48□□□□□ -1.37
SNRPF-205ENST00000553192 LINC00299Q6ZSB3 139 aa6.48□□□□□ -1.37
SNRPF-205ENST00000553192 NEBP20929 6669 aa6.48□□□□□ -1.37
SNRPF-205ENST00000553192 IGHV3OR16-9A0A0B4J2B5 98 aa6.47□□□□□ -1.37
SNRPF-205ENST00000553192 TRBV6-5A0A0K0K1A5 114 aa6.47□□□□□ -1.37
SNRPF-205ENST00000553192 FAM240BA0A1B0GVZ2 78 aa6.47□□□□□ -1.37
SNRPF-205ENST00000553192 RPS20P60866 119 aaKnown RBP6.47□□□□□ -1.37
SNRPF-205ENST00000553192 LBHQ53QV2 105 aaPredicted RBP6.47□□□□□ -1.37
SNRPF-205ENST00000553192 SPAG11AQ6PDA7 123 aa6.47□□□□□ -1.37
SNRPF-205ENST00000553192 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
SNRPF-205ENST00000553192 KRTAP9-4Q9BYQ2 154 aa6.47□□□□□ -1.37
SNRPF-205ENST00000553192 CYTL1Q9NRR1 136 aa6.47□□□□□ -1.37
SNRPF-205ENST00000553192 MAP1LC3B2A6NCE7 125 aa6.46□□□□□ -1.38
SNRPF-205ENST00000553192 PAGE4O60829 102 aa6.46□□□□□ -1.38
SNRPF-205ENST00000553192 LCE3BQ5TA77 95 aa6.46□□□□□ -1.38
SNRPF-205ENST00000553192 C2orf82Q6UX34 121 aa6.46□□□□□ -1.38
SNRPF-205ENST00000553192 C9orf62Q8N4C0 152 aa6.46□□□□□ -1.38
SNRPF-205ENST00000553192 CCDC32Q9BV29 185 aa6.46□□□□□ -1.38
SNRPF-205ENST00000553192 MAP1LC3BQ9GZQ8 125 aa6.46□□□□□ -1.38
SNRPF-205ENST00000553192 UBE2D4Q9Y2X8 147 aa6.46□□□□□ -1.38
SNRPF-205ENST00000553192 CSDC2Q9Y534 153 aaKnown RBP6.46□□□□□ -1.38
SNRPF-205ENST00000553192 IGLV8-61A0A075B6I0 122 aa6.45□□□□□ -1.38
SNRPF-205ENST00000553192 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms