RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 COX8AP10176 69 aa5.91□□□□□ -1.46
RAB5B-210ENST00000553116 OPRPNQ99935 248 aaPredicted RBP5.91□□□□□ -1.46
RAB5B-210ENST00000553116 ZMAT4Q9H898 229 aa5.91□□□□□ -1.46
RAB5B-210ENST00000553116 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.9□□□□□ -1.46
RAB5B-210ENST00000553116 TRBV10-1A0A0K0K1A3 114 aa5.9□□□□□ -1.46
RAB5B-210ENST00000553116 IGKV2-29A2NJV5 120 aaPredicted RBP5.9□□□□□ -1.46
RAB5B-210ENST00000553116 SMIM9A6NGZ8 99 aa5.9□□□□□ -1.46
RAB5B-210ENST00000553116 X6R8D5 127 aa5.9□□□□□ -1.46
RAB5B-210ENST00000553116 PKD1L1Q8TDX9 2849 aa5.9□□□□□ -1.47
RAB5B-210ENST00000553116 SIVA1O15304 175 aa5.9□□□□□ -1.47
RAB5B-210ENST00000553116 PCP2Q8IVA1 136 aa5.9□□□□□ -1.47
RAB5B-210ENST00000553116 PAPPA-AS1Q5QFB9 102 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 DGAT2L7PQ6IED9 249 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 C2orf91Q6ZV80 131 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 PRADC1Q9BSG0 188 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 WIPF1O43516 503 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 FAM222AQ5U5X8 452 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 CEMP1Q6PRD7 247 aaPredicted RBP5.89□□□□□ -1.47
RAB5B-210ENST00000553116 TRBV20-1A0A075B6N2 111 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 C9orf118A6NHY6 69 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 MT-ATP8P03928 68 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 FABP2P12104 132 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 RNASE13Q5GAN3 156 aaKnown RBP5.89□□□□□ -1.47
RAB5B-210ENST00000553116 TMEM170BQ5T4T1 132 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 NHP2Q9NX24 153 aaKnown RBP5.89□□□□□ -1.47
RAB5B-210ENST00000553116 HHLA3Q9XRX5 114 aa5.89□□□□□ -1.47
RAB5B-210ENST00000553116 LOC100131303A0A0U1RQF7 123 aa5.88□□□□□ -1.47
RAB5B-210ENST00000553116 DAZ4Q86SG3 579 aaKnown RBP5.88□□□□□ -1.47
RAB5B-210ENST00000553116 DAZ3Q9NR90 486 aaKnown RBP5.88□□□□□ -1.47
RAB5B-210ENST00000553116 IGHV4-28A0A0C4DH34 117 aa5.88□□□□□ -1.47
RAB5B-210ENST00000553116 SAMD5Q5TGI4 173 aa5.88□□□□□ -1.47
RAB5B-210ENST00000553116 IGLV4-3A0A075B6K6 122 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 IGKV2D-26A0A0A0MRZ7 120 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 TRBV6-4A0A1B0GX49 114 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 A0A1W2PPM0 123 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 UBE2L6O14933 153 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 SPINK8P0C7L1 97 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 HERVK_113P61574 105 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 CHCHD7Q9BUK0 85 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 C11orf86A6NJI1 115 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 KRTAP10-11P60412 298 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 UBE2D3P61077 147 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 DAD1P61803 113 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 UBE2D2P62837 147 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 CHAC1Q9BUX1 264 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 NOTCH1P46531 2555 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 LYRM9A8MSI8 78 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 FXYD2P54710 66 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 FHL2Q14192 279 aa5.87□□□□□ -1.47
RAB5B-210ENST00000553116 SPANXA1Q9NS26 97 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 A0A1B0GWB2 263 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 MIFP14174 115 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 HTN3P15516 51 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 IGLV4-69A0A075B6H9 119 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 A6NDN8 102 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 FGF6P10767 208 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 GYPEP15421 78 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 Q6ZUT4 128 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 UBE2D4Q9Y2X8 147 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 PYGO1Q9Y3Y4 419 aa5.86□□□□□ -1.47
RAB5B-210ENST00000553116 ANAPC13Q9BS18 74 aa5.85□□□□□ -1.47
RAB5B-210ENST00000553116 TRBV25-1A0A075B6N4 114 aa5.85□□□□□ -1.47
RAB5B-210ENST00000553116 A0A0J9YXV3 536 aa5.85□□□□□ -1.47
RAB5B-210ENST00000553116 TMEM243Q9BU79 118 aa5.85□□□□□ -1.47
RAB5B-210ENST00000553116 A0A096LPF7 62 aa5.84□□□□□ -1.47
RAB5B-210ENST00000553116 IGHV3-64A0A075B6Q5 118 aa5.84□□□□□ -1.47
RAB5B-210ENST00000553116 A0A0J9YY99 117 aa5.84□□□□□ -1.47
RAB5B-210ENST00000553116 SPART-AS1P0CW21 52 aa5.84□□□□□ -1.47
RAB5B-210ENST00000553116 SRSF9Q13242 221 aaKnown RBP eCLIP5.84□□□□□ -1.47
RAB5B-210ENST00000553116 CHCHD5Q9BSY4 110 aa5.84□□□□□ -1.47
RAB5B-210ENST00000553116 RETNQ9HD89 108 aa5.84□□□□□ -1.47
RAB5B-210ENST00000553116 PRO0255Q9UI72 69 aa5.84□□□□□ -1.47
RAB5B-210ENST00000553116 PAX4O43316 350 aa5.84□□□□□ -1.48
RAB5B-210ENST00000553116 EGFEM1PQ0D2K5 195 aa5.84□□□□□ -1.48
RAB5B-210ENST00000553116 NTM-AS1Q6ZSK4 140 aa5.84□□□□□ -1.48
RAB5B-210ENST00000553116 LINC00612Q8N6U2 182 aa5.84□□□□□ -1.48
RAB5B-210ENST00000553116 Q8NAQ8 132 aa5.84□□□□□ -1.48
RAB5B-210ENST00000553116 OR5A1Q8NGJ0 315 aa5.84□□□□□ -1.48
RAB5B-210ENST00000553116 TMEM101Q96IK0 257 aa5.84□□□□□ -1.48
RAB5B-210ENST00000553116 CELA1Q9UNI1 258 aa5.84□□□□□ -1.48
RAB5B-210ENST00000553116 E9PLD3 99 aa5.83□□□□□ -1.48
RAB5B-210ENST00000553116 F5H768 121 aa5.83□□□□□ -1.48
RAB5B-210ENST00000553116 SCGB1D4Q6XE38 83 aa5.83□□□□□ -1.48
RAB5B-210ENST00000553116 ZNF815PA8K554 130 aa5.83□□□□□ -1.48
RAB5B-210ENST00000553116 ATP5G1P05496 136 aa5.83□□□□□ -1.48
RAB5B-210ENST00000553116 LINC00694P0DN24 101 aa5.83□□□□□ -1.48
RAB5B-210ENST00000553116 GAGE6Q13070 117 aa5.83□□□□□ -1.48
RAB5B-210ENST00000553116 H3BRM9 83 aa5.82□□□□□ -1.48
RAB5B-210ENST00000553116 ATP6V0E2Q8NHE4 81 aa5.82□□□□□ -1.48
RAB5B-210ENST00000553116 AMELXQ99217 191 aa5.82□□□□□ -1.48
RAB5B-210ENST00000553116 SPANXB1Q9NS25 103 aaPredicted RBP5.82□□□□□ -1.48
RAB5B-210ENST00000553116 LGALS3P17931 250 aaKnown RBP5.82□□□□□ -1.48
RAB5B-210ENST00000553116 XGP55808 180 aa5.82□□□□□ -1.48
RAB5B-210ENST00000553116 NFE4Q86UQ8 179 aa5.82□□□□□ -1.48
RAB5B-210ENST00000553116 MAPKAPK5-AS1Q8N8E1 139 aa5.82□□□□□ -1.48
RAB5B-210ENST00000553116 TRAV13-1A0A0B4J241 112 aa5.82□□□□□ -1.48
RAB5B-210ENST00000553116 IGKV3OR2-268A0A0C4DH90 116 aa5.82□□□□□ -1.48
RAB5B-210ENST00000553116 MYMXA0A1B0GTQ4 84 aa5.82□□□□□ -1.48
RAB5B-210ENST00000553116 PRB2P02812 416 aaPredicted RBP5.82□□□□□ -1.48
RAB5B-210ENST00000553116 APOMO95445 188 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms