RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 LINC00959A0A1B0GUT2 108 aa7.89□□□□□ -1.15
CDK4-214ENST00000552862 C7orf77A4D0Y5 90 aa7.89□□□□□ -1.15
CDK4-214ENST00000552862 SLPIP03973 132 aa7.89□□□□□ -1.15
CDK4-214ENST00000552862 RIGQ13278 110 aa7.89□□□□□ -1.15
CDK4-214ENST00000552862 ZNF664Q8N3J9 261 aa7.89□□□□□ -1.15
CDK4-214ENST00000552862 TRBV20OR9-2A0A075B6H5 130 aa7.88□□□□□ -1.15
CDK4-214ENST00000552862 TRBV27A0A0K0K1C4 114 aa7.88□□□□□ -1.15
CDK4-214ENST00000552862 COX7A2LO14548 114 aa7.88□□□□□ -1.15
CDK4-214ENST00000552862 XCL1P47992 114 aa7.88□□□□□ -1.15
CDK4-214ENST00000552862 PRR3P79522 188 aaKnown RBP7.88□□□□□ -1.15
CDK4-214ENST00000552862 FOXI1Q12951 378 aa7.88□□□□□ -1.15
CDK4-214ENST00000552862 HIGD2BQ4VC39 106 aa7.88□□□□□ -1.15
CDK4-214ENST00000552862 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
CDK4-214ENST00000552862 C2orf48Q96LS8 159 aa7.88□□□□□ -1.15
CDK4-214ENST00000552862 RNASE7Q9H1E1 156 aaKnown RBP7.88□□□□□ -1.15
CDK4-214ENST00000552862 IGLV4-69A0A075B6H9 119 aa7.87□□□□□ -1.15
CDK4-214ENST00000552862 A0A0J9YXV3 536 aa7.87□□□□□ -1.15
CDK4-214ENST00000552862 A0A1B0GW15 77 aa7.87□□□□□ -1.15
CDK4-214ENST00000552862 LINC00862A6NCI5 91 aa7.87□□□□□ -1.15
CDK4-214ENST00000552862 PANO1I0J062 215 aa7.87□□□□□ -1.15
CDK4-214ENST00000552862 S100A8P05109 93 aa7.87□□□□□ -1.15
CDK4-214ENST00000552862 ESDP10768 282 aa7.87□□□□□ -1.15
CDK4-214ENST00000552862 CDC42SE2Q9NRR3 84 aa7.87□□□□□ -1.15
CDK4-214ENST00000552862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.86□□□□□ -1.15
CDK4-214ENST00000552862 IGKV2-29A2NJV5 120 aaPredicted RBP7.86□□□□□ -1.15
CDK4-214ENST00000552862 CHTF8P0CG12 524 aa7.86□□□□□ -1.15
CDK4-214ENST00000552862 MT1HL1P0DM35 61 aa7.86□□□□□ -1.15
CDK4-214ENST00000552862 HNRNPA3P51991 378 aaKnown RBP7.86□□□□□ -1.15
CDK4-214ENST00000552862 ODF1Q14990 250 aa7.86□□□□□ -1.15
CDK4-214ENST00000552862 RNF151Q2KHN1 245 aa7.86□□□□□ -1.15
CDK4-214ENST00000552862 FAM74A3Q4VXF1 159 aa7.86□□□□□ -1.15
CDK4-214ENST00000552862 IMMP2LQ96T52 175 aa7.86□□□□□ -1.15
CDK4-214ENST00000552862 EIF5A2Q9GZV4 153 aaKnown RBP7.86□□□□□ -1.15
CDK4-214ENST00000552862 OSTCQ9NRP0 149 aa7.86□□□□□ -1.15
CDK4-214ENST00000552862 LRP1Q07954 4544 aaKnown RBP7.86□□□□□ -1.15
CDK4-214ENST00000552862 TRAV26-2A0A0B4J265 109 aa7.85□□□□□ -1.15
CDK4-214ENST00000552862 CAMPP49913 170 aa7.85□□□□□ -1.15
CDK4-214ENST00000552862 POLR2KP53803 58 aaKnown RBP7.85□□□□□ -1.15
CDK4-214ENST00000552862 TMEM241Q24JQ0 296 aa7.85□□□□□ -1.15
CDK4-214ENST00000552862 LYPD6BQ8NI32 183 aa7.85□□□□□ -1.15
CDK4-214ENST00000552862 RPL39LQ96EH5 51 aaKnown RBP7.85□□□□□ -1.15
CDK4-214ENST00000552862 TIMM21Q9BVV7 248 aa7.85□□□□□ -1.15
CDK4-214ENST00000552862 HIGD1CA8MV81 97 aa7.84□□□□□ -1.15
CDK4-214ENST00000552862 CAMK2N2Q96S95 79 aa7.84□□□□□ -1.15
CDK4-214ENST00000552862 SMIM7Q9BQ49 75 aa7.84□□□□□ -1.15
CDK4-214ENST00000552862 C20orf78Q9BR46 151 aa7.84□□□□□ -1.15
CDK4-214ENST00000552862 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
CDK4-214ENST00000552862 A0A096LNI7 61 aa7.83□□□□□ -1.16
CDK4-214ENST00000552862 K7EN84 100 aa7.83□□□□□ -1.16
CDK4-214ENST00000552862 PTTG1IPP53801 180 aa7.83□□□□□ -1.16
CDK4-214ENST00000552862 SUMO2P61956 95 aaKnown RBP7.83□□□□□ -1.16
CDK4-214ENST00000552862 OR10D4PQ8NGN7 298 aa7.83□□□□□ -1.16
CDK4-214ENST00000552862 NAT8BQ9UHF3 227 aa7.83□□□□□ -1.16
CDK4-214ENST00000552862 HMCN2Q8NDA2 5059 aa7.82□□□□□ -1.16
CDK4-214ENST00000552862 ZNF727A8MUV8 499 aa7.82□□□□□ -1.16
CDK4-214ENST00000552862 F8W036 122 aa7.82□□□□□ -1.16
CDK4-214ENST00000552862 RAB4AP20338 218 aa7.82□□□□□ -1.16
CDK4-214ENST00000552862 TSHBP01222 138 aa7.81□□□□□ -1.16
CDK4-214ENST00000552862 MT-ND6P03923 174 aa7.81□□□□□ -1.16
CDK4-214ENST00000552862 CEBPGP53567 150 aa7.81□□□□□ -1.16
CDK4-214ENST00000552862 RPL32P62910 135 aaKnown RBP7.81□□□□□ -1.16
CDK4-214ENST00000552862 SRSF9Q13242 221 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDK4-214ENST00000552862 SMDT1Q9H4I9 107 aa7.81□□□□□ -1.16
CDK4-214ENST00000552862 TMEM242Q9NWH2 141 aa7.81□□□□□ -1.16
CDK4-214ENST00000552862 PSORS1C2Q9UIG4 136 aa7.81□□□□□ -1.16
CDK4-214ENST00000552862 PPBPP02775 128 aa7.8□□□□□ -1.16
CDK4-214ENST00000552862 GAGE2BQ13066 116 aa7.8□□□□□ -1.16
CDK4-214ENST00000552862 DIRC1Q969H9 104 aa7.8□□□□□ -1.16
CDK4-214ENST00000552862 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
CDK4-214ENST00000552862 LINC01551Q86U37 167 aa7.79□□□□□ -1.16
CDK4-214ENST00000552862 NUP35Q8NFH5 326 aa7.79□□□□□ -1.16
CDK4-214ENST00000552862 SPANXA1Q9NS26 97 aa7.79□□□□□ -1.16
CDK4-214ENST00000552862 TRBV24-1A0A075B6N3 115 aa7.78□□□□□ -1.16
CDK4-214ENST00000552862 NDUFA1O15239 70 aa7.78□□□□□ -1.16
CDK4-214ENST00000552862 RAB5AP20339 215 aa7.78□□□□□ -1.16
CDK4-214ENST00000552862 G0S2P27469 103 aa7.78□□□□□ -1.16
CDK4-214ENST00000552862 CKS2P33552 79 aa7.78□□□□□ -1.16
CDK4-214ENST00000552862 AKAP14Q86UN6 197 aa7.78□□□□□ -1.16
CDK4-214ENST00000552862 MRPL35Q9NZE8 188 aaKnown RBP7.78□□□□□ -1.16
CDK4-214ENST00000552862 TRAV13-1A0A0B4J241 112 aa7.77□□□□□ -1.17
CDK4-214ENST00000552862 UBE2D4Q9Y2X8 147 aa7.77□□□□□ -1.17
CDK4-214ENST00000552862 TGIF2-C20orf24A0A0A6YYL0 155 aa7.76□□□□□ -1.17
CDK4-214ENST00000552862 MRPS36P82909 103 aaKnown RBP7.76□□□□□ -1.17
CDK4-214ENST00000552862 RPL18AQ02543 176 aaKnown RBP7.76□□□□□ -1.17
CDK4-214ENST00000552862 FAM104BQ5XKR9 115 aa7.76□□□□□ -1.17
CDK4-214ENST00000552862 AMN1Q8IY45 258 aa7.76□□□□□ -1.17
CDK4-214ENST00000552862 PKHD1L1Q86WI1 4243 aa7.75□□□□□ -1.17
CDK4-214ENST00000552862 TLX1NBP0CAT3 122 aa7.75□□□□□ -1.17
CDK4-214ENST00000552862 IFI27P40305 119 aaPredicted RBP7.75□□□□□ -1.17
CDK4-214ENST00000552862 HBBP68871 147 aa7.75□□□□□ -1.17
CDK4-214ENST00000552862 ALKAL2Q6UX46 152 aa7.75□□□□□ -1.17
CDK4-214ENST00000552862 RPL13AP40429 203 aaKnown RBP7.74□□□□□ -1.17
CDK4-214ENST00000552862 SPAG11BQ08648 103 aa7.74□□□□□ -1.17
CDK4-214ENST00000552862 PEA15Q15121 130 aa7.74□□□□□ -1.17
CDK4-214ENST00000552862 C9orf116Q5BN46 136 aaPredicted RBP7.74□□□□□ -1.17
CDK4-214ENST00000552862 C1orf137Q5JT78 98 aa7.74□□□□□ -1.17
CDK4-214ENST00000552862 NAT8Q9UHE5 227 aa7.74□□□□□ -1.17
CDK4-214ENST00000552862 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
CDK4-214ENST00000552862 IGLV1-50A0A075B6I6 118 aa7.73□□□□□ -1.17
CDK4-214ENST00000552862 PAPPA-AS1Q5QFB9 102 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms