RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 DEFB1P60022 68 aa8.13□□□□□ -1.11
TUBA1C-209ENST00000552448 RPL11P62913 178 aaKnown RBP8.13□□□□□ -1.11
TUBA1C-209ENST00000552448 PEMTQ9UBM1 199 aa8.13□□□□□ -1.11
TUBA1C-209ENST00000552448 SMIM9A6NGZ8 99 aa8.12□□□□□ -1.11
TUBA1C-209ENST00000552448 IGHV3-30-3P0DP02 117 aa8.12□□□□□ -1.11
TUBA1C-209ENST00000552448 ID1P41134 155 aa8.12□□□□□ -1.11
TUBA1C-209ENST00000552448 HERVK_113P63121 156 aa8.12□□□□□ -1.11
TUBA1C-209ENST00000552448 C20orf203Q8NBC4 194 aa8.12□□□□□ -1.11
TUBA1C-209ENST00000552448 IGKV3-7A0A075B6H7 116 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 IGHV1-58A0A0C4DH39 117 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 F5H697 171 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 ATOX1O00244 68 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 PRSS2P07478 247 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 C5orf38Q86SI9 138 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 TMEM61Q8N0U2 210 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 DAND5Q8N907 189 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 DCANP1Q8TF63 244 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 CITED2Q99967 270 aaPredicted RBP8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 ZNF702PQ9H963 129 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 MYO9AB2RTY4 2548 aa8.11□□□□□ -1.11
TUBA1C-209ENST00000552448 F6UB75 175 aa8.1□□□□□ -1.11
TUBA1C-209ENST00000552448 I3L3M4 83 aa8.1□□□□□ -1.11
TUBA1C-209ENST00000552448 MRPS36P82909 103 aaKnown RBP8.1□□□□□ -1.11
TUBA1C-209ENST00000552448 Q8N2B8 174 aa8.1□□□□□ -1.11
TUBA1C-209ENST00000552448 FLNAP21333 2647 aaKnown RBP8.1□□□□□ -1.11
TUBA1C-209ENST00000552448 GNRH2O43555 120 aa8.1□□□□□ -1.11
TUBA1C-209ENST00000552448 INAFM2P0DMQ5 153 aa8.1□□□□□ -1.11
TUBA1C-209ENST00000552448 KRTAP1-1Q07627 177 aa8.1□□□□□ -1.11
TUBA1C-209ENST00000552448 GAGE2AQ6NT46 116 aa8.1□□□□□ -1.11
TUBA1C-209ENST00000552448 NDUFA12Q9UI09 145 aa8.1□□□□□ -1.11
TUBA1C-209ENST00000552448 IGLV4-3A0A075B6K6 122 aa8.09□□□□□ -1.11
TUBA1C-209ENST00000552448 TRACP01848 142 aa8.09□□□□□ -1.11
TUBA1C-209ENST00000552448 FAM222AQ5U5X8 452 aa8.09□□□□□ -1.11
TUBA1C-209ENST00000552448 TLN2Q9Y4G6 2542 aa8.09□□□□□ -1.11
TUBA1C-209ENST00000552448 CCDC168Q8NDH2 2452 aa8.09□□□□□ -1.11
TUBA1C-209ENST00000552448 A0A0J9YXV3 536 aa8.08□□□□□ -1.12
TUBA1C-209ENST00000552448 KLLNB2CW77 178 aa8.08□□□□□ -1.12
TUBA1C-209ENST00000552448 CIRBPQ14011 172 aaKnown RBP8.08□□□□□ -1.12
TUBA1C-209ENST00000552448 RNF152Q8N8N0 203 aa8.08□□□□□ -1.12
TUBA1C-209ENST00000552448 TRAV8-3A0A0A6YYJ7 113 aa8.08□□□□□ -1.12
TUBA1C-209ENST00000552448 M0QY20 66 aa8.08□□□□□ -1.12
TUBA1C-209ENST00000552448 COX7A2LO14548 114 aa8.08□□□□□ -1.12
TUBA1C-209ENST00000552448 CLEC2BQ92478 149 aa8.08□□□□□ -1.12
TUBA1C-209ENST00000552448 UBE2E2Q96LR5 201 aa8.08□□□□□ -1.12
TUBA1C-209ENST00000552448 EDA2RQ9HAV5 297 aa8.08□□□□□ -1.12
TUBA1C-209ENST00000552448 TINCRA0A1B0GVN0 87 aa8.07□□□□□ -1.12
TUBA1C-209ENST00000552448 TMEM258P61165 79 aa8.07□□□□□ -1.12
TUBA1C-209ENST00000552448 FAM19A5Q7Z5A7 132 aaPredicted RBP8.07□□□□□ -1.12
TUBA1C-209ENST00000552448 VSIG2Q96IQ7 327 aa8.07□□□□□ -1.12
TUBA1C-209ENST00000552448 HIST1H4AP62805 103 aaKnown RBP8.06□□□□□ -1.12
TUBA1C-209ENST00000552448 C9orf85Q96MD7 179 aa8.06□□□□□ -1.12
TUBA1C-209ENST00000552448 SYNJ2BPP57105 145 aa8.06□□□□□ -1.12
TUBA1C-209ENST00000552448 IGHV3-64A0A075B6Q5 118 aa8.05□□□□□ -1.12
TUBA1C-209ENST00000552448 A0A087WWL8 130 aa8.05□□□□□ -1.12
TUBA1C-209ENST00000552448 DNAJC9-AS1A6NH13 148 aa8.05□□□□□ -1.12
TUBA1C-209ENST00000552448 SPRY2O43597 315 aa8.05□□□□□ -1.12
TUBA1C-209ENST00000552448 HOXD3P31249 432 aaPredicted RBP8.05□□□□□ -1.12
TUBA1C-209ENST00000552448 ZNF415Q09FC8 603 aa8.05□□□□□ -1.12
TUBA1C-209ENST00000552448 ADAMTSL4-AS1Q5T5F5 129 aa8.05□□□□□ -1.12
TUBA1C-209ENST00000552448 DUX5Q96PT3 197 aa8.05□□□□□ -1.12
TUBA1C-209ENST00000552448 OVOL2Q9BRP0 275 aa8.05□□□□□ -1.12
TUBA1C-209ENST00000552448 NF1P21359 2839 aa8.05□□□□□ -1.12
TUBA1C-209ENST00000552448 K7EQG2 157 aa8.04□□□□□ -1.12
TUBA1C-209ENST00000552448 CD28P10747 220 aa8.04□□□□□ -1.12
TUBA1C-209ENST00000552448 TRAV25A0A0B4J276 109 aa8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 CEMP1Q6PRD7 247 aaPredicted RBP8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 C3orf56Q8N813 242 aa8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 C2orf48Q96LS8 159 aa8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 OPRPNQ99935 248 aaPredicted RBP8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 ANK3Q12955 4377 aaKnown RBP8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 FASNP49327 2511 aaKnown RBP8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 NDUFA1O15239 70 aa8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 RNASE1P07998 156 aaKnown RBP8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 SMCR5Q8TEV8 140 aa8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 SONP18583 2426 aaKnown RBP8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 HECTD1Q9ULT8 2610 aa8.03□□□□□ -1.12
TUBA1C-209ENST00000552448 IGHV3-16A0A0C4DH30 117 aa8.02□□□□□ -1.13
TUBA1C-209ENST00000552448 SNRPD3P62318 126 aaKnown RBP8.02□□□□□ -1.13
TUBA1C-209ENST00000552448 C18orf65Q6ZTR6 163 aa8.02□□□□□ -1.13
TUBA1C-209ENST00000552448 LOC107984640A0A0U1RRK4 108 aa8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 RPL18AQ02543 176 aaKnown RBP8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 DAZ2Q13117 558 aaKnown RBP8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 FAM74A4Q5TZK3 123 aa8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 DAZ4Q86SG3 579 aaKnown RBP8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 JPT2Q9H910 190 aa8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 DAZ3Q9NR90 486 aaKnown RBP8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 PF4P02776 101 aa8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 BAALC-AS2P0C853 105 aa8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 TIRAPP58753 221 aa8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 DEFB136Q30KP8 78 aa8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 Q6ZSV7 163 aa8.01□□□□□ -1.13
TUBA1C-209ENST00000552448 TRAV12-3A0A0B4J271 114 aa8□□□□□ -1.13
TUBA1C-209ENST00000552448 ADARB2-AS1A8MUL3 147 aa8□□□□□ -1.13
TUBA1C-209ENST00000552448 SLURP1P55000 103 aa8□□□□□ -1.13
TUBA1C-209ENST00000552448 HILS1P60008 231 aa8□□□□□ -1.13
TUBA1C-209ENST00000552448 SERP2Q8N6R1 65 aa8□□□□□ -1.13
TUBA1C-209ENST00000552448 C16orf95Q9H693 158 aa8□□□□□ -1.13
TUBA1C-209ENST00000552448 ESM1Q9NQ30 184 aa8□□□□□ -1.13
TUBA1C-209ENST00000552448 OTOGQ6ZRI0 2925 aa7.99□□□□□ -1.13
TUBA1C-209ENST00000552448 IGLV5-45A0A087WSX0 123 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms