RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 KIR2DL5BQ8NHK3 375 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 FAM104AQ969W3 186 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 ZNF479Q96JC4 524 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 SMR3AQ99954 134 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 NOP10Q9NPE3 64 aaKnown RBP4.88□□□□□ -1.63
CCDC59-206ENST00000552412 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
CCDC59-206ENST00000552412 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.88□□□□□ -1.63
CCDC59-206ENST00000552412 C2CD3Q4AC94 2353 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 NOTCH2Q04721 2471 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 TMEM238C9JI98 176 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 INAFM1C9JVW0 142 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 H3BS24 57 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 H3BUT2 72 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 CRLF1O75462 422 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 PRM2P04554 102 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 RPL35AP18077 110 aaKnown RBP4.87□□□□□ -1.63
CCDC59-206ENST00000552412 UBE2D1P51668 147 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 SRSF9Q13242 221 aaKnown RBP eCLIP4.87□□□□□ -1.63
CCDC59-206ENST00000552412 C12orf74Q32Q52 190 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 LYRM7Q5U5X0 104 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 Q6ZVH6 145 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 LINC00612Q8N6U2 182 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 CITED1Q99966 193 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 JMJD1CQ15652 2540 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 HECTD1Q9ULT8 2610 aa4.87□□□□□ -1.63
CCDC59-206ENST00000552412 TRGV2A0A075B6R0 118 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 IGHV1-58A0A0C4DH39 117 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 A0A0J9YXV3 536 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 TIMM17BO60830 172 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 EMP1P54849 157 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 TSPEAR-AS2P59090 65 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 HERVK_113P63121 156 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 DGAT2L7PQ6IED9 249 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 Q6ZUT4 128 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 SBSPONQ8IVN8 264 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 OPRPNQ99935 248 aaPredicted RBP4.86□□□□□ -1.63
CCDC59-206ENST00000552412 WFDC10AQ9H1F0 79 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 GEMIN7Q9H840 131 aaKnown RBP4.86□□□□□ -1.63
CCDC59-206ENST00000552412 SPCS1Q9Y6A9 102 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 NOTCH3Q9UM47 2321 aa4.86□□□□□ -1.63
CCDC59-206ENST00000552412 CUBNO60494 3623 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.85□□□□□ -1.63
CCDC59-206ENST00000552412 IGKV2-29A2NJV5 120 aaPredicted RBP4.85□□□□□ -1.63
CCDC59-206ENST00000552412 LYRM9A8MSI8 78 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 IGLL5B9A064 214 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 IGHV3-30P01768 117 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 LINC00694P0DN24 101 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 IGHV3-30-5P0DP03 117 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 APOC4P55056 127 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 RPL24P83731 157 aaKnown RBP4.85□□□□□ -1.63
CCDC59-206ENST00000552412 RNF183Q96D59 192 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 VSIG2Q96IQ7 327 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 TMEM243Q9BU79 118 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 BAHCC1Q9P281 2608 aa4.85□□□□□ -1.63
CCDC59-206ENST00000552412 OTOGQ6ZRI0 2925 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 FN1P02751 2386 aaKnown RBP4.84□□□□□ -1.63
CCDC59-206ENST00000552412 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.84□□□□□ -1.63
CCDC59-206ENST00000552412 TRGV4A0A0C4DH28 118 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 IGHV3-38A0A0C4DH36 116 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 A0A0J9YXY3 114 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 GAGE12BA1L429 117 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 GAGE7O76087 117 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 GAGE12FP0CL80 117 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 GAGE12GP0CL81 117 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 GAGE12IP0CL82 117 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 IGHV3-30-3P0DP02 117 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 ZFAND6Q6FIF0 208 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 WFDC9Q8NEX5 89 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 DEFB104AQ8WTQ1 72 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 RAB37Q96AX2 223 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 TMEM101Q96IK0 257 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 SPANXDQ9BXN6 97 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 PPDPFQ9H3Y8 114 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 SPANXCQ9NY87 97 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 Q9UF83 564 aa4.84□□□□□ -1.63
CCDC59-206ENST00000552412 A0A0B4J2C4 111 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 IGLV5-39A0A0G2JS06 123 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 GAGE12JA6NER3 117 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 K7ERJ3 54 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 UBE2L6O14933 153 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 IFITM1P13164 125 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 GAGE4Q13068 117 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 GAGE5Q13069 117 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 FHL2Q14192 279 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 GAGE13Q4V321 117 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 NTM-AS1Q6ZSK4 140 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 COPS9Q8WXC6 57 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 CDC42SE2Q9NRR3 84 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 NDUFA12Q9UI09 145 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 X6R8D5 127 aa4.83□□□□□ -1.64
CCDC59-206ENST00000552412 TRBV6-8A0A0A6YYG3 113 aa4.82□□□□□ -1.64
CCDC59-206ENST00000552412 TEX48A0A1B0GUV7 120 aa4.82□□□□□ -1.64
CCDC59-206ENST00000552412 F8W1H4 67 aa4.82□□□□□ -1.64
CCDC59-206ENST00000552412 K7ERU9 68 aa4.82□□□□□ -1.64
CCDC59-206ENST00000552412 NDUFA1O15239 70 aa4.82□□□□□ -1.64
CCDC59-206ENST00000552412 CEMP1Q6PRD7 247 aaPredicted RBP4.82□□□□□ -1.64
CCDC59-206ENST00000552412 C10orf126Q8N4M7 172 aa4.82□□□□□ -1.64
CCDC59-206ENST00000552412 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
CCDC59-206ENST00000552412 TRBV20-1A0A075B6N2 111 aa4.81□□□□□ -1.64
CCDC59-206ENST00000552412 MIFP14174 115 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms