RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 SOHLH1Q5JUK2 328 aa3.5□□□□□ -1.85
CHPT1-209ENST00000552329 C1orf134Q5TEV5 83 aa3.5□□□□□ -1.85
CHPT1-209ENST00000552329 LYPD5Q6UWN5 251 aa3.5□□□□□ -1.85
CHPT1-209ENST00000552329 LINC00469Q8N7U9 141 aa3.5□□□□□ -1.85
CHPT1-209ENST00000552329 SLC25A29Q8N8R3 303 aa3.5□□□□□ -1.85
CHPT1-209ENST00000552329 OR10AG1Q8NH19 301 aa3.5□□□□□ -1.85
CHPT1-209ENST00000552329 ZNRF2Q8NHG8 242 aa3.5□□□□□ -1.85
CHPT1-209ENST00000552329 TXNDC17Q9BRA2 123 aa3.5□□□□□ -1.85
CHPT1-209ENST00000552329 RNASE7Q9H1E1 156 aaKnown RBP3.5□□□□□ -1.85
CHPT1-209ENST00000552329 IL36BQ9NZH7 164 aa3.5□□□□□ -1.85
CHPT1-209ENST00000552329 DNAH1Q9P2D7 4330 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 TRBV20OR9-2A0A075B6H5 130 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 NBDYA0A0U1RRE5 68 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 ZNF727A8MUV8 499 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 H3BNG1 76 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 SIVA1O15304 175 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 IGHV3-30P01768 117 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 IGHV3-33P01772 117 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 SMIM17P0DL12 118 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 IGHV3-30-3P0DP02 117 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 IGHV3-30-5P0DP03 117 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 COTL1Q14019 142 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 RNASEKQ6P5S7 137 aaKnown RBP3.49□□□□□ -1.85
CHPT1-209ENST00000552329 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 ZFP82Q8N141 532 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 FER1L6-AS1Q8NA97 138 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 ATP6V0E2Q8NHE4 81 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 DEFB104AQ8WTQ1 72 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 C18orf15Q96N68 181 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 GEMIN7Q9H840 131 aaKnown RBP3.49□□□□□ -1.85
CHPT1-209ENST00000552329 VPS13DQ5THJ4 4388 aa3.49□□□□□ -1.85
CHPT1-209ENST00000552329 LYSTQ99698 3801 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 K7EN84 100 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 GATCO43716 136 aaKnown RBP3.48□□□□□ -1.85
CHPT1-209ENST00000552329 IGLV2-8P01709 118 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 S100A6P06703 90 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 RPS20P60866 119 aaKnown RBP3.48□□□□□ -1.85
CHPT1-209ENST00000552329 RAB14P61106 215 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 REG3AQ06141 175 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 RHOHQ15669 191 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 TEX261Q6UWH6 196 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 LYZL1Q6UWQ5 148 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 Q6ZN92 141 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 WFDC10BQ8IUB3 73 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 SFRP2Q96HF1 295 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 SMIM7Q9BQ49 75 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 BIN3Q9NQY0 253 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 MRPS16Q9Y3D3 137 aaKnown RBP3.48□□□□□ -1.85
CHPT1-209ENST00000552329 LY96Q9Y6Y9 160 aa3.48□□□□□ -1.85
CHPT1-209ENST00000552329 TRAV8-6A0A0B4J262 113 aa3.47□□□□□ -1.85
CHPT1-209ENST00000552329 TRBV6-4A0A1B0GX49 114 aa3.47□□□□□ -1.85
CHPT1-209ENST00000552329 LRCOL1A6NCL2 159 aa3.47□□□□□ -1.85
CHPT1-209ENST00000552329 CRYGDP07320 174 aa3.47□□□□□ -1.85
CHPT1-209ENST00000552329 SRP19P09132 144 aaKnown RBP3.47□□□□□ -1.85
CHPT1-209ENST00000552329 NTF3P20783 257 aa3.47□□□□□ -1.85
CHPT1-209ENST00000552329 EVI2AP22794 236 aa3.47□□□□□ -1.85
CHPT1-209ENST00000552329 PEA15Q15121 130 aa3.47□□□□□ -1.85
CHPT1-209ENST00000552329 ADIRFQ15847 76 aa3.47□□□□□ -1.85
CHPT1-209ENST00000552329 RPP21Q9H633 154 aaKnown RBP3.47□□□□□ -1.85
CHPT1-209ENST00000552329 C19orf71A6NCJ1 209 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 C9JQL5 133 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 TMEM262E9PQX1 116 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 TMEM250H0YL14 139 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 OR5AL1P0C617 328 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 CACNG7P62955 275 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 TMEM241Q24JQ0 296 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 C6orf226Q5I0X4 101 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 TTC32Q5I0X7 151 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 DNLZQ5SXM8 178 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 LYPD6BQ8NI32 183 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 PTH2Q96A98 100 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 BORCS7Q96B45 105 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 AP1S3Q96PC3 154 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 GTSF1LQ9H1H1 148 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 URGCP-MRPS24S4R325 110 aa3.46□□□□□ -1.86
CHPT1-209ENST00000552329 TRAV26-2A0A0B4J265 109 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 A8MWL6 223 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 F2Z2F3 143 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 PSCAO43653 123 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 TRGC1P0CF51 173 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 FUSP35637 526 aaKnown RBP eCLIP3.45□□□□□ -1.86
CHPT1-209ENST00000552329 NMUP48645 174 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 HNRNPA3P51991 378 aaKnown RBP3.45□□□□□ -1.86
CHPT1-209ENST00000552329 FOXA3P55318 350 aaPredicted RBP3.45□□□□□ -1.86
CHPT1-209ENST00000552329 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 RAB4BP61018 213 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 LINC00336Q6ZUF6 198 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 SMIM15Q7Z3B0 74 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.45□□□□□ -1.86
CHPT1-209ENST00000552329 SMIM12Q96EX1 92 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 UPK3BQ9BT76 320 aa3.45□□□□□ -1.86
CHPT1-209ENST00000552329 KMT2AQ03164 3969 aa3.44□□□□□ -1.86
CHPT1-209ENST00000552329 IGLV4-60A0A075B6I1 120 aa3.44□□□□□ -1.86
CHPT1-209ENST00000552329 TRBV7-3A0A075B6L6 115 aa3.44□□□□□ -1.86
CHPT1-209ENST00000552329 A0A087WX48 190 aa3.44□□□□□ -1.86
CHPT1-209ENST00000552329 CXCL1P09341 107 aa3.44□□□□□ -1.86
CHPT1-209ENST00000552329 IGLC6P0CF74 106 aa3.44□□□□□ -1.86
CHPT1-209ENST00000552329 RPL23P62829 140 aaKnown RBP3.44□□□□□ -1.86
CHPT1-209ENST00000552329 DEFB116Q30KQ4 102 aa3.44□□□□□ -1.86
CHPT1-209ENST00000552329 LINC00483Q53H64 154 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms