RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 UBE2L6O14933 153 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 PLA2G10O15496 165 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 IGLV7-43P04211 117 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 IL7P13232 177 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 FHITP49789 147 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 CYCSP99999 105 aaKnown RBP3.21□□□□□ -1.9
HOXB3-213ENST00000552000 FAM74A3Q4VXF1 159 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 PHF5AQ7RTV0 110 aaKnown RBP3.21□□□□□ -1.9
HOXB3-213ENST00000552000 WFDC1Q9HC57 220 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 TMEM167BQ9NRX6 74 aa3.21□□□□□ -1.9
HOXB3-213ENST00000552000 LYRM1O43325 122 aa3.2□□□□□ -1.9
HOXB3-213ENST00000552000 KRTAP1-4P0C5Y4 121 aa3.2□□□□□ -1.9
HOXB3-213ENST00000552000 RPL12P30050 165 aaKnown RBP3.2□□□□□ -1.9
HOXB3-213ENST00000552000 UBE2D1P51668 147 aa3.2□□□□□ -1.9
HOXB3-213ENST00000552000 UBE2G2P60604 165 aa3.2□□□□□ -1.9
HOXB3-213ENST00000552000 SYCNQ0VAF6 134 aa3.2□□□□□ -1.9
HOXB3-213ENST00000552000 C9orf116Q5BN46 136 aaPredicted RBP3.2□□□□□ -1.9
HOXB3-213ENST00000552000 SPANXN1Q5VSR9 72 aa3.2□□□□□ -1.9
HOXB3-213ENST00000552000 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
HOXB3-213ENST00000552000 A0A087WZ39 114 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 LOC107984640A0A0U1RRK4 108 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 A0A1W2PRE2 83 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 M0QY20 66 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 CXorf1O96002 111 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 MGPP08493 103 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 SMIM17P0DL12 118 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 BCL2P10415 239 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 RPL13AP40429 203 aaKnown RBP3.19□□□□□ -1.9
HOXB3-213ENST00000552000 NKX2-5P52952 324 aaPredicted RBP3.19□□□□□ -1.9
HOXB3-213ENST00000552000 EIF5AP63241 154 aaKnown RBP3.19□□□□□ -1.9
HOXB3-213ENST00000552000 RPL24P83731 157 aaKnown RBP3.19□□□□□ -1.9
HOXB3-213ENST00000552000 RIGQ13278 110 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 PPP1R1CQ8WVI7 109 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 ZFP30Q9Y2G7 519 aa3.19□□□□□ -1.9
HOXB3-213ENST00000552000 IGHV1-58A0A0C4DH39 117 aa3.18□□□□□ -1.9
HOXB3-213ENST00000552000 CCDC160A6NGH7 325 aa3.18□□□□□ -1.9
HOXB3-213ENST00000552000 SNAI2O43623 268 aa3.18□□□□□ -1.9
HOXB3-213ENST00000552000 XCL1P47992 114 aa3.18□□□□□ -1.9
HOXB3-213ENST00000552000 UBE2G1P62253 170 aa3.18□□□□□ -1.9
HOXB3-213ENST00000552000 AMMECR1LQ6DCA0 310 aa3.18□□□□□ -1.9
HOXB3-213ENST00000552000 KRTAP11-1Q8IUC1 163 aa3.18□□□□□ -1.9
HOXB3-213ENST00000552000 HIST1H2BAQ96A08 127 aa3.18□□□□□ -1.9
HOXB3-213ENST00000552000 AP1S3Q96PC3 154 aa3.18□□□□□ -1.9
HOXB3-213ENST00000552000 MPC2O95563 127 aa3.17□□□□□ -1.9
HOXB3-213ENST00000552000 CXCL1P09341 107 aa3.17□□□□□ -1.9
HOXB3-213ENST00000552000 OR5AL1P0C617 328 aa3.17□□□□□ -1.9
HOXB3-213ENST00000552000 FGF6P10767 208 aa3.17□□□□□ -1.9
HOXB3-213ENST00000552000 ATP6V0CP27449 155 aa3.17□□□□□ -1.9
HOXB3-213ENST00000552000 LINC01547P58512 204 aaPredicted RBP3.17□□□□□ -1.9
HOXB3-213ENST00000552000 RPL18AQ02543 176 aaKnown RBP3.17□□□□□ -1.9
HOXB3-213ENST00000552000 Q6ZVQ6 151 aa3.17□□□□□ -1.9
HOXB3-213ENST00000552000 FMC1Q96HJ9 113 aa3.17□□□□□ -1.9
HOXB3-213ENST00000552000 PGLYRP4Q96LB8 373 aa3.17□□□□□ -1.9
HOXB3-213ENST00000552000 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
HOXB3-213ENST00000552000 ACTR3CQ9C0K3 210 aaPredicted RBP3.17□□□□□ -1.9
HOXB3-213ENST00000552000 IGLV4-69A0A075B6H9 119 aa3.16□□□□□ -1.9
HOXB3-213ENST00000552000 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.16□□□□□ -1.9
HOXB3-213ENST00000552000 IGLV9-49A0A0B4J1Y8 123 aa3.16□□□□□ -1.9
HOXB3-213ENST00000552000 IGKV2-29A2NJV5 120 aaPredicted RBP3.16□□□□□ -1.9
HOXB3-213ENST00000552000 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.16□□□□□ -1.9
HOXB3-213ENST00000552000 CCL25O15444 150 aa3.16□□□□□ -1.9
HOXB3-213ENST00000552000 LTAP01374 205 aa3.16□□□□□ -1.9
HOXB3-213ENST00000552000 AKR1C3P42330 323 aa3.16□□□□□ -1.9
HOXB3-213ENST00000552000 H2BFSP57053 126 aa3.16□□□□□ -1.9
HOXB3-213ENST00000552000 MEF2BQ02080 365 aaPredicted RBP3.16□□□□□ -1.9
HOXB3-213ENST00000552000 RASL11AQ6T310 242 aa3.16□□□□□ -1.9
HOXB3-213ENST00000552000 OR5A1Q8NGJ0 315 aa3.16□□□□□ -1.9
HOXB3-213ENST00000552000 ISOC2Q96AB3 205 aa3.16□□□□□ -1.9
HOXB3-213ENST00000552000 RETNLBQ9BQ08 111 aa3.16□□□□□ -1.9
HOXB3-213ENST00000552000 LINC00959A0A1B0GUT2 108 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 FAM168BA1KXE4 195 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 RAB19A4D1S5 217 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 ATP5LO75964 103 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 APOMO95445 188 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 PET100P0DJ07 73 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 DEFA1P59665 94 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 ZNF726P1Q15940 193 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 EIF5AL1Q6IS14 154 aaKnown RBP3.15□□□□□ -1.91
HOXB3-213ENST00000552000 NUP35Q8NFH5 326 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 MPLKIPQ8TAP9 179 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 CAMK2N2Q96S95 79 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 OPRPNQ99935 248 aaPredicted RBP3.15□□□□□ -1.91
HOXB3-213ENST00000552000 PSMG3Q9BT73 122 aaPredicted RBP3.15□□□□□ -1.91
HOXB3-213ENST00000552000 NKX6-2Q9C056 277 aaPredicted RBP3.15□□□□□ -1.91
HOXB3-213ENST00000552000 MED28Q9H204 178 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 NIT2Q9NQR4 276 aa3.15□□□□□ -1.91
HOXB3-213ENST00000552000 CARHSP1Q9Y2V2 147 aaKnown RBP3.15□□□□□ -1.91
HOXB3-213ENST00000552000 CTXND1A0A1B0GTU2 59 aa3.14□□□□□ -1.91
HOXB3-213ENST00000552000 NTF3P20783 257 aa3.14□□□□□ -1.91
HOXB3-213ENST00000552000 SERF2P84101 59 aa3.14□□□□□ -1.91
HOXB3-213ENST00000552000 VAMP3Q15836 100 aa3.14□□□□□ -1.91
HOXB3-213ENST00000552000 C10orf25Q5T742 122 aa3.14□□□□□ -1.91
HOXB3-213ENST00000552000 FAM19A5Q7Z5A7 132 aaPredicted RBP3.14□□□□□ -1.91
HOXB3-213ENST00000552000 SLC7A5P1Q8MH63 180 aa3.14□□□□□ -1.91
HOXB3-213ENST00000552000 LINC01561Q8N1V8 128 aa3.14□□□□□ -1.91
HOXB3-213ENST00000552000 STOML3Q8TAV4 291 aa3.14□□□□□ -1.91
HOXB3-213ENST00000552000 TSKUQ8WUA8 353 aa3.14□□□□□ -1.91
HOXB3-213ENST00000552000 TNFSF18Q9UNG2 199 aa3.14□□□□□ -1.91
HOXB3-213ENST00000552000 IGLV7-46A0A075B6I9 117 aa3.13□□□□□ -1.91
HOXB3-213ENST00000552000 A0A087X002 238 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms