RNA–Protein interactions for RNA: ENST00000551872.1

DCTN2-223, Transcript of dynactin subunit 2, human

TSL 2

Gene DCTN2, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN2-223	ENST00000551872	VPS13B	Q7Z7G8	4022 aa		4.82	□□□□□ -1.64
DCTN2-223	ENST00000551872	HLA-DQA1	P01909	254 aa		4.82	□□□□□ -1.64
DCTN2-223	ENST00000551872	XG	P55808	180 aa		4.82	□□□□□ -1.64
DCTN2-223	ENST00000551872	SMAGP	Q0VAQ4	97 aa		4.82	□□□□□ -1.64
DCTN2-223	ENST00000551872	RHEB	Q15382	184 aa		4.82	□□□□□ -1.64
DCTN2-223	ENST00000551872	AMMECR1L	Q6DCA0	310 aa		4.82	□□□□□ -1.64
DCTN2-223	ENST00000551872	CLRN3	Q8NCR9	226 aa		4.82	□□□□□ -1.64
DCTN2-223	ENST00000551872	OR5A1	Q8NGJ0	315 aa		4.82	□□□□□ -1.64
DCTN2-223	ENST00000551872	CDC42SE2	Q9NRR3	84 aa		4.82	□□□□□ -1.64
DCTN2-223	ENST00000551872	UBE2D4	Q9Y2X8	147 aa		4.82	□□□□□ -1.64
DCTN2-223	ENST00000551872	ABCA13	Q86UQ4	5058 aa		4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872	IGLV10-54	A0A075B6I4	117 aa		4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872	PRSS1	P07477	247 aa		4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872	FCER1G	P30273	86 aa		4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872	CNBP	P62633	177 aa	Known RBP	4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872	RNASEK	Q6P5S7	137 aa	Known RBP	4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872	TMEM136	Q6ZRR5	245 aa		4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872		Q8N1X5	172 aa		4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872	FAM104A	Q969W3	186 aa		4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872	PRELID3A	Q96N28	172 aa		4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872	SPANXA1	Q9NS26	97 aa		4.81	□□□□□ -1.64
DCTN2-223	ENST00000551872	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	LINC00959	A0A1B0GUT2	108 aa		4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872		K7EMI3	77 aa		4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	CCL25	O15444	150 aa		4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	MRPS36	P82909	103 aa	Known RBP	4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	FOXI1	Q12951	378 aa		4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	DGAT2L7P	Q6IED9	249 aa		4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	ZNF664	Q8N3J9	261 aa		4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	C15orf56	Q8N910	161 aa		4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	TMEM18	Q96B42	140 aa		4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	TMEM101	Q96IK0	257 aa		4.8	□□□□□ -1.64
DCTN2-223	ENST00000551872	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.79	□□□□□ -1.64
DCTN2-223	ENST00000551872	COX19	Q49B96	90 aa		4.79	□□□□□ -1.64
DCTN2-223	ENST00000551872	CD164L2	Q6UWJ8	174 aa		4.79	□□□□□ -1.64
DCTN2-223	ENST00000551872	C9orf163	Q8N9P6	203 aa		4.79	□□□□□ -1.64
DCTN2-223	ENST00000551872	GNB1L	Q9BYB4	327 aa		4.79	□□□□□ -1.64
DCTN2-223	ENST00000551872	KRTAP4-5	Q9BYR2	181 aa		4.79	□□□□□ -1.64
DCTN2-223	ENST00000551872	MAP1LC3A	Q9H492	121 aa		4.79	□□□□□ -1.64
DCTN2-223	ENST00000551872	FAM30A	Q9NZY2	134 aa		4.79	□□□□□ -1.64
DCTN2-223	ENST00000551872	PYGO1	Q9Y3Y4	419 aa		4.79	□□□□□ -1.64
DCTN2-223	ENST00000551872	GAGE12H	A6NDE8	117 aa		4.78	□□□□□ -1.64
DCTN2-223	ENST00000551872	MT-ND6	P03923	174 aa		4.78	□□□□□ -1.64
DCTN2-223	ENST00000551872	NPS	P0C0P6	89 aa		4.78	□□□□□ -1.64
DCTN2-223	ENST00000551872	S100P	P25815	95 aa		4.78	□□□□□ -1.64
DCTN2-223	ENST00000551872	RPL39	P62891	51 aa	Known RBP	4.78	□□□□□ -1.64
DCTN2-223	ENST00000551872	CFAP161	Q6P656	301 aa		4.78	□□□□□ -1.64
DCTN2-223	ENST00000551872		Q6ZUT4	128 aa		4.78	□□□□□ -1.64
DCTN2-223	ENST00000551872	SVBP	Q8N300	66 aa		4.78	□□□□□ -1.64
DCTN2-223	ENST00000551872		Q8N8P6	123 aa		4.78	□□□□□ -1.64
DCTN2-223	ENST00000551872	NXT2	Q9NPJ8	142 aa	Known RBP	4.78	□□□□□ -1.64
DCTN2-223	ENST00000551872	IGKV3OR2-268	A0A0C4DH90	116 aa		4.77	□□□□□ -1.65
DCTN2-223	ENST00000551872	LINC01546	A6NGU7	62 aa		4.77	□□□□□ -1.65
DCTN2-223	ENST00000551872	C1orf196	B1AJZ1	125 aa		4.77	□□□□□ -1.65
DCTN2-223	ENST00000551872	SLPI	P03973	132 aa		4.77	□□□□□ -1.65
DCTN2-223	ENST00000551872	CIRBP	Q14011	172 aa	Known RBP	4.77	□□□□□ -1.65
DCTN2-223	ENST00000551872	IGHV1-58	A0A0C4DH39	117 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	hDV102S1	A0JD36	115 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	SNAPIN	O95295	136 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	APOC3	P02656	99 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	RAB5A	P20339	215 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	XCL1	P47992	114 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	SS18	Q15532	418 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	NDUFA5	Q16718	116 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	LINC01620	Q4KN68	170 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	ORMDL2	Q53FV1	153 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	YPEL4	Q96NS1	127 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	CHAC1	Q9BUX1	264 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	RPS10P5	Q9NQ39	176 aa		4.76	□□□□□ -1.65
DCTN2-223	ENST00000551872	IGLV4-3	A0A075B6K6	122 aa		4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	IGIP	A6NJ69	53 aa		4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	IFI27	P40305	119 aa	Predicted RBP	4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	RNASE13	Q5GAN3	156 aa	Known RBP	4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	C2orf66	Q6UXQ4	117 aa		4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	SDIM1	Q6ZPB5	146 aa		4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	LINC00173	Q6ZV60	143 aa		4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	SCX	Q7RTU7	201 aa		4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	AP5S1	Q9NUS5	200 aa		4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	CYSLTR1	Q9Y271	337 aa		4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	SRRM2	Q9UQ35	2752 aa	Known RBP	4.75	□□□□□ -1.65
DCTN2-223	ENST00000551872	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872	TRAV13-1	A0A0B4J241	112 aa		4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872	LOC389332	A0A1B0GUA5	103 aa		4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872	COX7A2L	O14548	114 aa		4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872	KIAA1644	Q3SXP7	199 aa		4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872		Q5VSD8	79 aa		4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872	TMEM141	Q96I45	108 aa		4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872	AMELX	Q99217	191 aa		4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872	TIMM17A	Q99595	171 aa		4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872	OPRPN	Q99935	248 aa	Predicted RBP	4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872	MRPL18	Q9H0U6	180 aa	Known RBP	4.74	□□□□□ -1.65
DCTN2-223	ENST00000551872	PKHD1L1	Q86WI1	4243 aa		4.73	□□□□□ -1.65
DCTN2-223	ENST00000551872	IGHV3-64	A0A075B6Q5	118 aa		4.73	□□□□□ -1.65
DCTN2-223	ENST00000551872	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.73	□□□□□ -1.65
DCTN2-223	ENST00000551872	LINC01549	A6NIU2	74 aa		4.73	□□□□□ -1.65
DCTN2-223	ENST00000551872	IFITM10	A6NMD0	228 aa		4.73	□□□□□ -1.65
DCTN2-223	ENST00000551872	EPM2A	B3EWF7	344 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms