RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 RNASEKQ6P5S7 137 aaKnown RBP11.49□□□□□ -0.57
CDK4-208ENST00000551706 CLPSL2Q6UWE3 100 aa11.49□□□□□ -0.57
CDK4-208ENST00000551706 PRELID3AQ96N28 172 aa11.49□□□□□ -0.57
CDK4-208ENST00000551706 SMIM2Q9BVW6 85 aa11.49□□□□□ -0.57
CDK4-208ENST00000551706 SCO1O75880 301 aa11.48□□□□□ -0.57
CDK4-208ENST00000551706 TMEM101Q96IK0 257 aa11.48□□□□□ -0.57
CDK4-208ENST00000551706 Q8N814 137 aa11.47□□□□□ -0.57
CDK4-208ENST00000551706 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
CDK4-208ENST00000551706 UBR4Q5T4S7 5183 aa11.46□□□□□ -0.57
CDK4-208ENST00000551706 COX19Q49B96 90 aa11.46□□□□□ -0.57
CDK4-208ENST00000551706 MRPL52Q86TS9 123 aaKnown RBP11.46□□□□□ -0.57
CDK4-208ENST00000551706 CBLN2Q8IUK8 224 aa11.46□□□□□ -0.57
CDK4-208ENST00000551706 OR5A1Q8NGJ0 315 aa11.46□□□□□ -0.57
CDK4-208ENST00000551706 TMEM18Q96B42 140 aa11.46□□□□□ -0.57
CDK4-208ENST00000551706 EPM2AB3EWF7 344 aa11.45□□□□□ -0.58
CDK4-208ENST00000551706 HLA-DQA1P01909 254 aa11.45□□□□□ -0.58
CDK4-208ENST00000551706 INAFM2P0DMQ5 153 aa11.45□□□□□ -0.58
CDK4-208ENST00000551706 BAALCQ8WXS3 180 aa11.45□□□□□ -0.58
CDK4-208ENST00000551706 MAP1LC3AQ9H492 121 aa11.45□□□□□ -0.58
CDK4-208ENST00000551706 PRSS47A8MTI9 375 aa11.44□□□□□ -0.58
CDK4-208ENST00000551706 GNB1LQ9BYB4 327 aa11.44□□□□□ -0.58
CDK4-208ENST00000551706 LECT2O14960 151 aa11.43□□□□□ -0.58
CDK4-208ENST00000551706 RAB5AP20339 215 aa11.43□□□□□ -0.58
CDK4-208ENST00000551706 WFDC2Q14508 124 aa11.43□□□□□ -0.58
CDK4-208ENST00000551706 C14orf177Q52M58 125 aa11.43□□□□□ -0.58
CDK4-208ENST00000551706 DGAT2L7PQ6IED9 249 aa11.43□□□□□ -0.58
CDK4-208ENST00000551706 CSDC2Q9Y534 153 aaKnown RBP11.43□□□□□ -0.58
CDK4-208ENST00000551706 IGLV10-54A0A075B6I4 117 aa11.42□□□□□ -0.58
CDK4-208ENST00000551706 IGLV5-52A0A0A0MRZ9 124 aa11.42□□□□□ -0.58
CDK4-208ENST00000551706 MT-ND6P03923 174 aa11.42□□□□□ -0.58
CDK4-208ENST00000551706 MYCBP2O75592 4640 aa11.42□□□□□ -0.58
CDK4-208ENST00000551706 KRTAP26-1Q6PEX3 210 aa11.41□□□□□ -0.58
CDK4-208ENST00000551706 TIMM21Q9BVV7 248 aa11.41□□□□□ -0.58
CDK4-208ENST00000551706 CDC42SE2Q9NRR3 84 aa11.41□□□□□ -0.58
CDK4-208ENST00000551706 UBE2D4Q9Y2X8 147 aa11.41□□□□□ -0.58
CDK4-208ENST00000551706 SRRM2Q9UQ35 2752 aaKnown RBP11.4□□□□□ -0.58
CDK4-208ENST00000551706 IGKV3OR2-268A0A0C4DH90 116 aa11.4□□□□□ -0.58
CDK4-208ENST00000551706 LOC389332A0A1B0GUA5 103 aa11.4□□□□□ -0.58
CDK4-208ENST00000551706 ZNF664Q8N3J9 261 aa11.4□□□□□ -0.58
CDK4-208ENST00000551706 K7EMI3 77 aa11.39□□□□□ -0.59
CDK4-208ENST00000551706 GCSHP23434 173 aa11.39□□□□□ -0.59
CDK4-208ENST00000551706 FUSP35637 526 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDK4-208ENST00000551706 Q8N8P6 123 aa11.39□□□□□ -0.59
CDK4-208ENST00000551706 NXT2Q9NPJ8 142 aaKnown RBP11.39□□□□□ -0.59
CDK4-208ENST00000551706 USP17L23D6RBM5 183 aa11.38□□□□□ -0.59
CDK4-208ENST00000551706 SPANXA1Q9NS26 97 aa11.38□□□□□ -0.59
CDK4-208ENST00000551706 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.37□□□□□ -0.59
CDK4-208ENST00000551706 KIAA1644Q3SXP7 199 aa11.37□□□□□ -0.59
CDK4-208ENST00000551706 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
CDK4-208ENST00000551706 TGIF2-C20orf24A0A0A6YYL0 155 aa11.36□□□□□ -0.59
CDK4-208ENST00000551706 LINC00959A0A1B0GUT2 108 aa11.36□□□□□ -0.59
CDK4-208ENST00000551706 CCL25O15444 150 aa11.36□□□□□ -0.59
CDK4-208ENST00000551706 RPL39P62891 51 aaKnown RBP11.36□□□□□ -0.59
CDK4-208ENST00000551706 SS18Q15532 418 aa11.36□□□□□ -0.59
CDK4-208ENST00000551706 ORMDL2Q53FV1 153 aa11.36□□□□□ -0.59
CDK4-208ENST00000551706 GAGE12HA6NDE8 117 aa11.35□□□□□ -0.59
CDK4-208ENST00000551706 FABP9Q0Z7S8 132 aa11.35□□□□□ -0.59
CDK4-208ENST00000551706 YPEL4Q96NS1 127 aa11.35□□□□□ -0.59
CDK4-208ENST00000551706 MRPL18Q9H0U6 180 aaKnown RBP11.35□□□□□ -0.59
CDK4-208ENST00000551706 COLCA2A8K830 154 aa11.34□□□□□ -0.59
CDK4-208ENST00000551706 G0S2P27469 103 aa11.34□□□□□ -0.59
CDK4-208ENST00000551706 IFI27P40305 119 aaPredicted RBP11.34□□□□□ -0.59
CDK4-208ENST00000551706 MRPS36P82909 103 aaKnown RBP11.34□□□□□ -0.59
CDK4-208ENST00000551706 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
CDK4-208ENST00000551706 VPS13BQ7Z7G8 4022 aa11.33□□□□□ -0.6
CDK4-208ENST00000551706 KRTAP10-1P60331 282 aa11.33□□□□□ -0.6
CDK4-208ENST00000551706 Q6ZUT4 128 aa11.33□□□□□ -0.6
CDK4-208ENST00000551706 ALKBH7Q9BT30 221 aaPredicted RBP11.33□□□□□ -0.6
CDK4-208ENST00000551706 PYGO1Q9Y3Y4 419 aa11.33□□□□□ -0.6
CDK4-208ENST00000551706 C1orf196B1AJZ1 125 aa11.32□□□□□ -0.6
CDK4-208ENST00000551706 XCL1P47992 114 aa11.32□□□□□ -0.6
CDK4-208ENST00000551706 PRSS3P2Q8NHM4 247 aa11.32□□□□□ -0.6
CDK4-208ENST00000551706 CYSLTR1Q9Y271 337 aa11.32□□□□□ -0.6
CDK4-208ENST00000551706 TRAPPC1Q9Y5R8 145 aa11.32□□□□□ -0.6
CDK4-208ENST00000551706 PRSS1P07477 247 aa11.31□□□□□ -0.6
CDK4-208ENST00000551706 FOXI1Q12951 378 aa11.31□□□□□ -0.6
CDK4-208ENST00000551706 CD164L2Q6UWJ8 174 aa11.31□□□□□ -0.6
CDK4-208ENST00000551706 FAT1Q14517 4588 aa11.3□□□□□ -0.6
CDK4-208ENST00000551706 FLG2Q5D862 2391 aaPredicted RBP11.3□□□□□ -0.6
CDK4-208ENST00000551706 RNASE13Q5GAN3 156 aaKnown RBP11.3□□□□□ -0.6
CDK4-208ENST00000551706 C2orf66Q6UXQ4 117 aa11.3□□□□□ -0.6
CDK4-208ENST00000551706 TRAV13-1A0A0B4J241 112 aa11.29□□□□□ -0.6
CDK4-208ENST00000551706 hDV102S1A0JD36 115 aa11.29□□□□□ -0.6
CDK4-208ENST00000551706 Q5VSD8 79 aa11.29□□□□□ -0.6
CDK4-208ENST00000551706 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
CDK4-208ENST00000551706 NPSP0C0P6 89 aa11.28□□□□□ -0.6
CDK4-208ENST00000551706 IGLV4-3A0A075B6K6 122 aa11.27□□□□□ -0.61
CDK4-208ENST00000551706 LINC01549A6NIU2 74 aa11.27□□□□□ -0.61
CDK4-208ENST00000551706 IFITM10A6NMD0 228 aa11.27□□□□□ -0.61
CDK4-208ENST00000551706 CNBPP62633 177 aaKnown RBP11.27□□□□□ -0.61
CDK4-208ENST00000551706 Q6ZN92 141 aa11.27□□□□□ -0.61
CDK4-208ENST00000551706 C15orf56Q8N910 161 aa11.27□□□□□ -0.61
CDK4-208ENST00000551706 FAM104AQ969W3 186 aa11.27□□□□□ -0.61
CDK4-208ENST00000551706 TMEM141Q96I45 108 aa11.27□□□□□ -0.61
CDK4-208ENST00000551706 OPRPNQ99935 248 aaPredicted RBP11.27□□□□□ -0.61
CDK4-208ENST00000551706 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.26□□□□□ -0.61
CDK4-208ENST00000551706 IGHV1-58A0A0C4DH39 117 aa11.26□□□□□ -0.61
CDK4-208ENST00000551706 LINC01546A6NGU7 62 aa11.26□□□□□ -0.61
CDK4-208ENST00000551706 FA2HQ7L5A8 372 aa11.26□□□□□ -0.61
CDK4-208ENST00000551706 GVQW2A0A096LPI5 108 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1128.2 ms