RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 LYSTQ99698 3801 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 DEFB131BA0A096LNP1 70 aa4.28□□□□□ -1.72
DEPDC4-209ENST00000550587 TSHBP01222 138 aa4.28□□□□□ -1.72
DEPDC4-209ENST00000550587 AKR1D1P51857 326 aa4.28□□□□□ -1.72
DEPDC4-209ENST00000550587 PMCHL1Q16048 86 aa4.28□□□□□ -1.72
DEPDC4-209ENST00000550587 NEGR1Q7Z3B1 354 aa4.28□□□□□ -1.72
DEPDC4-209ENST00000550587 UBE2DNLQ8IWF7 75 aa4.28□□□□□ -1.72
DEPDC4-209ENST00000550587 TOMM6Q96B49 74 aa4.28□□□□□ -1.72
DEPDC4-209ENST00000550587 HSPB8Q9UJY1 196 aa4.28□□□□□ -1.72
DEPDC4-209ENST00000550587 GAGE12JA6NER3 117 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 PRSS29PA6NIE9 313 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 F5H768 121 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 H3BNG1 76 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 LINC00694P0DN24 101 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 BTF3P20290 206 aaKnown RBP4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 GAGE1Q13065 139 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 GAGE4Q13068 117 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 GAGE5Q13069 117 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 COTL1Q14019 142 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 Q6ZTC4 211 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 SH2D6Q7Z4S9 175 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 SPATA12Q7Z6I5 190 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 C20orf203Q8NBC4 194 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 VSIG2Q96IQ7 327 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 GTSF1LQ9H1H1 148 aa4.27□□□□□ -1.73
DEPDC4-209ENST00000550587 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 TRAV26-1A0A087WT03 109 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 LOC100131303A0A0U1RQF7 123 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 M0R2N4 97 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 ATP5LO75964 103 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 C3orf79P0CE67 100 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 JOSD1Q15040 202 aaPredicted RBP4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 MRPL23Q16540 153 aaKnown RBP4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 TMEM97Q5BJF2 176 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 C2orf66Q6UXQ4 117 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 LINC00173Q6ZV60 143 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 ERASQ7Z444 233 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 ATP6V0E2Q8NHE4 81 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 IFI27L1Q96BM0 104 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 SCGB3A1Q96QR1 104 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 MAP1LC3CQ9BXW4 147 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 CYSLTR1Q9Y271 337 aa4.26□□□□□ -1.73
DEPDC4-209ENST00000550587 IGHV3-38A0A0C4DH36 116 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 IGIPA6NJ69 53 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 SYS1-DBNDD2H3BUS1 97 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 H7C423 109 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 NPSP0C0P6 89 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 HTN3P15516 51 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 KRTDAPP60985 99 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 SMAGPQ0VAQ4 97 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 PET117Q6UWS5 81 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 NTM-AS1Q6ZSK4 140 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 DEFB104AQ8WTQ1 72 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 TMEM141Q96I45 108 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 CHCHD7Q9BUK0 85 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 PYGO1Q9Y3Y4 419 aa4.25□□□□□ -1.73
DEPDC4-209ENST00000550587 STARD9Q9P2P6 4700 aa4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 TRBV25-1A0A075B6N4 114 aa4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 TRBV6-8A0A0A6YYG3 113 aa4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 A0A0J9YY99 117 aa4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 SCGB1D1O95968 90 aa4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 PRSS1P07477 247 aa4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 RPL39P62891 51 aaKnown RBP4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 PYY3Q5JQD4 70 aa4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 TIMM17AQ99595 171 aa4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 TIMM21Q9BVV7 248 aa4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 ICOSQ9Y6W8 199 aa4.24□□□□□ -1.73
DEPDC4-209ENST00000550587 A0A096LPF7 62 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 TRAV12-1A0A0B4J245 112 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 KRTAP29-1A8MX34 341 aaPredicted RBP4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 SMIM6P0DI80 62 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 TIRAPP58753 221 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 PAPPA-AS1Q5QFB9 102 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 C1orf134Q5TEV5 83 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 LINC01545Q5VT33 79 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 Q6ZN92 141 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 MRPL52Q86TS9 123 aaKnown RBP4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 Q8N976 141 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 TMEM243Q9BU79 118 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 SPANXA1Q9NS26 97 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 CSDC2Q9Y534 153 aaKnown RBP4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 ALMS1Q8TCU4 4167 aa4.23□□□□□ -1.73
DEPDC4-209ENST00000550587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 A0A087WX48 190 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 A0A1B0GUV1 79 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 C20orf202A1L168 122 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 IGKV2-29A2NJV5 120 aaPredicted RBP4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 UBE2L6O14933 153 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 MRPS36P82909 103 aaKnown RBP4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 PMVKQ15126 192 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 DGAT2L7PQ6IED9 249 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 LYPD5Q6UWN5 251 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 LINC00518Q8N0U6 118 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 C15orf53Q8NAA6 179 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 BAALCQ8WXS3 180 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 FAM104AQ969W3 186 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 VCX2Q9H322 139 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 CST9LQ9H4G1 147 aa4.22□□□□□ -1.73
DEPDC4-209ENST00000550587 UBE2D4Q9Y2X8 147 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms