RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 PMCHP20382 165 aa12.3□□□□□ -0.44
GATC-202ENST00000548171 GAGE2BQ13066 116 aa12.3□□□□□ -0.44
GATC-202ENST00000548171 TRBV6-5A0A0K0K1A5 114 aa12.29□□□□□ -0.44
GATC-202ENST00000548171 ESDP10768 282 aa12.29□□□□□ -0.44
GATC-202ENST00000548171 MRAP2Q96G30 205 aa12.29□□□□□ -0.44
GATC-202ENST00000548171 RGS21Q2M5E4 152 aa12.28□□□□□ -0.44
GATC-202ENST00000548171 MRPL52Q86TS9 123 aaKnown RBP12.28□□□□□ -0.44
GATC-202ENST00000548171 CDC42SE2Q9NRR3 84 aa12.28□□□□□ -0.44
GATC-202ENST00000548171 MT-ND6P03923 174 aa12.27□□□□□ -0.45
GATC-202ENST00000548171 FOXA3P55318 350 aaPredicted RBP12.27□□□□□ -0.45
GATC-202ENST00000548171 RNASE7Q9H1E1 156 aaKnown RBP12.27□□□□□ -0.45
GATC-202ENST00000548171 PSORS1C2Q9UIG4 136 aa12.27□□□□□ -0.45
GATC-202ENST00000548171 IGLV4-69A0A075B6H9 119 aa12.26□□□□□ -0.45
GATC-202ENST00000548171 A0A1W2PNN7 141 aa12.26□□□□□ -0.45
GATC-202ENST00000548171 TSHBP01222 138 aa12.26□□□□□ -0.45
GATC-202ENST00000548171 BCL2P10415 239 aa12.26□□□□□ -0.45
GATC-202ENST00000548171 APOMO95445 188 aa12.25□□□□□ -0.45
GATC-202ENST00000548171 MALP21145 153 aa12.25□□□□□ -0.45
GATC-202ENST00000548171 ST20Q9HBF5 79 aa12.25□□□□□ -0.45
GATC-202ENST00000548171 C1orf196B1AJZ1 125 aa12.24□□□□□ -0.45
GATC-202ENST00000548171 TAGLN2P37802 199 aaKnown RBP12.24□□□□□ -0.45
GATC-202ENST00000548171 C9orf116Q5BN46 136 aaPredicted RBP12.24□□□□□ -0.45
GATC-202ENST00000548171 NUP35Q8NFH5 326 aa12.24□□□□□ -0.45
GATC-202ENST00000548171 CAMK2N2Q96S95 79 aa12.24□□□□□ -0.45
GATC-202ENST00000548171 TMEM242Q9NWH2 141 aa12.24□□□□□ -0.45
GATC-202ENST00000548171 K7EN84 100 aa12.23□□□□□ -0.45
GATC-202ENST00000548171 COX7A2LO14548 114 aa12.23□□□□□ -0.45
GATC-202ENST00000548171 C1orf137Q5JT78 98 aa12.23□□□□□ -0.45
GATC-202ENST00000548171 OCC1Q8TAD7 63 aa12.23□□□□□ -0.45
GATC-202ENST00000548171 C7orf77A4D0Y5 90 aa12.22□□□□□ -0.45
GATC-202ENST00000548171 C2orf48Q96LS8 159 aa12.22□□□□□ -0.45
GATC-202ENST00000548171 TRBV27A0A0K0K1C4 114 aa12.21□□□□□ -0.45
GATC-202ENST00000548171 DIRC1Q969H9 104 aa12.21□□□□□ -0.45
GATC-202ENST00000548171 A8MWL6 223 aa12.2□□□□□ -0.46
GATC-202ENST00000548171 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.2□□□□□ -0.46
GATC-202ENST00000548171 POLR2KP53803 58 aaKnown RBP12.2□□□□□ -0.46
GATC-202ENST00000548171 SMAGPQ0VAQ4 97 aa12.2□□□□□ -0.46
GATC-202ENST00000548171 CSDC2Q9Y534 153 aaKnown RBP12.2□□□□□ -0.46
GATC-202ENST00000548171 RPL18AQ02543 176 aaKnown RBP12.19□□□□□ -0.46
GATC-202ENST00000548171 PRR26Q8N8Z3 221 aa12.19□□□□□ -0.46
GATC-202ENST00000548171 TSKUQ8WUA8 353 aa12.19□□□□□ -0.46
GATC-202ENST00000548171 BORCS7Q96B45 105 aa12.19□□□□□ -0.46
GATC-202ENST00000548171 LPAP08519 4548 aa12.19□□□□□ -0.46
GATC-202ENST00000548171 GATCO43716 136 aaKnown RBP12.18□□□□□ -0.46
GATC-202ENST00000548171 IGLV7-43P04211 117 aa12.18□□□□□ -0.46
GATC-202ENST00000548171 RNF151Q2KHN1 245 aa12.18□□□□□ -0.46
GATC-202ENST00000548171 FAM231DQ6ZW35 169 aa12.17□□□□□ -0.46
GATC-202ENST00000548171 PHF5AQ7RTV0 110 aaKnown RBP12.17□□□□□ -0.46
GATC-202ENST00000548171 CT83Q5H943 113 aa12.16□□□□□ -0.46
GATC-202ENST00000548171 TMEM191AQ9H0A3 160 aa12.16□□□□□ -0.46
GATC-202ENST00000548171 VCYO14598 125 aa12.15□□□□□ -0.46
GATC-202ENST00000548171 IGLV1-50A0A075B6I6 118 aa12.14□□□□□ -0.47
GATC-202ENST00000548171 H0Y9J4 135 aa12.14□□□□□ -0.47
GATC-202ENST00000548171 FCER1GP30273 86 aa12.14□□□□□ -0.47
GATC-202ENST00000548171 SPAG11BQ08648 103 aa12.14□□□□□ -0.47
GATC-202ENST00000548171 UBE2D4Q9Y2X8 147 aa12.14□□□□□ -0.47
GATC-202ENST00000548171 TRAV13-1A0A0B4J241 112 aa12.13□□□□□ -0.47
GATC-202ENST00000548171 A0A1B0GUT8 65 aa12.13□□□□□ -0.47
GATC-202ENST00000548171 C5orf38Q86SI9 138 aa12.13□□□□□ -0.47
GATC-202ENST00000548171 OR10D4PQ8NGN7 298 aa12.13□□□□□ -0.47
GATC-202ENST00000548171 OPRPNQ99935 248 aaPredicted RBP12.13□□□□□ -0.47
GATC-202ENST00000548171 A0A087WZ39 114 aa12.12□□□□□ -0.47
GATC-202ENST00000548171 F8WDY8 70 aa12.12□□□□□ -0.47
GATC-202ENST00000548171 PPP1R17O96001 155 aa12.12□□□□□ -0.47
GATC-202ENST00000548171 RAB4AP20338 218 aa12.12□□□□□ -0.47
GATC-202ENST00000548171 IMMP2LQ96T52 175 aa12.12□□□□□ -0.47
GATC-202ENST00000548171 MRPL35Q9NZE8 188 aaKnown RBP12.12□□□□□ -0.47
GATC-202ENST00000548171 TMEM250H0YL14 139 aa12.11□□□□□ -0.47
GATC-202ENST00000548171 KIR2DL4Q99706 377 aa12.11□□□□□ -0.47
GATC-202ENST00000548171 RNASE13Q5GAN3 156 aaKnown RBP12.1□□□□□ -0.47
GATC-202ENST00000548171 TIMM21Q9BVV7 248 aa12.1□□□□□ -0.47
GATC-202ENST00000548171 HIGD1CA8MV81 97 aa12.09□□□□□ -0.47
GATC-202ENST00000548171 AMN1Q8IY45 258 aa12.09□□□□□ -0.47
GATC-202ENST00000548171 TMEM18Q96B42 140 aa12.09□□□□□ -0.47
GATC-202ENST00000548171 A0A0U1RQV1 116 aa12.08□□□□□ -0.48
GATC-202ENST00000548171 SUMO2P61956 95 aaKnown RBP12.08□□□□□ -0.48
GATC-202ENST00000548171 SLC51BQ86UW2 128 aa12.08□□□□□ -0.48
GATC-202ENST00000548171 NDUFA1O15239 70 aa12.07□□□□□ -0.48
GATC-202ENST00000548171 TLX1NBP0CAT3 122 aa12.07□□□□□ -0.48
GATC-202ENST00000548171 RPL13AP40429 203 aaKnown RBP12.07□□□□□ -0.48
GATC-202ENST00000548171 TMEM241Q24JQ0 296 aa12.07□□□□□ -0.48
GATC-202ENST00000548171 Q6ZUT4 128 aa12.07□□□□□ -0.48
GATC-202ENST00000548171 PPP1R2P9O14990 202 aa12.06□□□□□ -0.48
GATC-202ENST00000548171 KRTAP1-4P0C5Y4 121 aa12.06□□□□□ -0.48
GATC-202ENST00000548171 UBE2D1P51668 147 aa12.06□□□□□ -0.48
GATC-202ENST00000548171 ORAOV1Q8WV07 137 aa12.06□□□□□ -0.48
GATC-202ENST00000548171 FAM168BA1KXE4 195 aa12.05□□□□□ -0.48
GATC-202ENST00000548171 PRR4Q16378 134 aa12.05□□□□□ -0.48
GATC-202ENST00000548171 KRTAP11-1Q8IUC1 163 aa12.05□□□□□ -0.48
GATC-202ENST00000548171 NRACQ8N912 160 aa12.05□□□□□ -0.48
GATC-202ENST00000548171 SMKR1H3BMG3 65 aa12.04□□□□□ -0.48
GATC-202ENST00000548171 IGHV3OR16-9A0A0B4J2B5 98 aa12.03□□□□□ -0.48
GATC-202ENST00000548171 RIGQ13278 110 aa12.03□□□□□ -0.48
GATC-202ENST00000548171 FAM19A5Q7Z5A7 132 aaPredicted RBP12.03□□□□□ -0.48
GATC-202ENST00000548171 MUC2Q02817 5179 aa12.02□□□□□ -0.49
GATC-202ENST00000548171 TCAPO15273 167 aa12.02□□□□□ -0.49
GATC-202ENST00000548171 LINC01551Q86U37 167 aa12.02□□□□□ -0.49
GATC-202ENST00000548171 OSTCQ9NRP0 149 aa12.02□□□□□ -0.49
GATC-202ENST00000548171 CEBPGP53567 150 aa12.01□□□□□ -0.49
GATC-202ENST00000548171 SMDT1Q9H4I9 107 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms