RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 HIGD1CA8MV81 97 aa11.64□□□□□ -0.55
CHERP-204ENST00000546538 RAB4AP20338 218 aa11.64□□□□□ -0.55
CHERP-204ENST00000546538 CEBPGP53567 150 aa11.64□□□□□ -0.55
CHERP-204ENST00000546538 IFITM2Q01629 132 aa11.64□□□□□ -0.55
CHERP-204ENST00000546538 C7orf33Q8WU49 177 aa11.64□□□□□ -0.55
CHERP-204ENST00000546538 TMEM191AQ9H0A3 160 aa11.64□□□□□ -0.55
CHERP-204ENST00000546538 ST20Q9HBF5 79 aa11.64□□□□□ -0.55
CHERP-204ENST00000546538 CDC42SE2Q9NRR3 84 aa11.64□□□□□ -0.55
CHERP-204ENST00000546538 BLOC1S1P78537 153 aa11.63□□□□□ -0.55
CHERP-204ENST00000546538 MRPL52Q86TS9 123 aaKnown RBP11.63□□□□□ -0.55
CHERP-204ENST00000546538 AMN1Q8IY45 258 aa11.63□□□□□ -0.55
CHERP-204ENST00000546538 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
CHERP-204ENST00000546538 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
CHERP-204ENST00000546538 A0A1B0GUT8 65 aa11.62□□□□□ -0.55
CHERP-204ENST00000546538 SMKR1H3BMG3 65 aa11.62□□□□□ -0.55
CHERP-204ENST00000546538 MRAP2Q96G30 205 aa11.61□□□□□ -0.55
CHERP-204ENST00000546538 SMIM7Q9BQ49 75 aa11.61□□□□□ -0.55
CHERP-204ENST00000546538 RNF213Q63HN8 5207 aa11.61□□□□□ -0.55
CHERP-204ENST00000546538 IGHV1-58A0A0C4DH39 117 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 RAB14P61106 215 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 NRACQ8N912 160 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 TMEM101Q96IK0 257 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 BTF3L4Q96K17 158 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 LINC01600Q96MT4 127 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 V9GYV3 84 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 ZNF664Q8N3J9 261 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 CARD19Q96LW7 228 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
CHERP-204ENST00000546538 SRP19P09132 144 aaKnown RBP11.59□□□□□ -0.55
CHERP-204ENST00000546538 C7orf77A4D0Y5 90 aa11.58□□□□□ -0.56
CHERP-204ENST00000546538 NUP35Q8NFH5 326 aa11.58□□□□□ -0.56
CHERP-204ENST00000546538 FAM210AQ96ND0 272 aa11.58□□□□□ -0.56
CHERP-204ENST00000546538 SS18Q15532 418 aa11.57□□□□□ -0.56
CHERP-204ENST00000546538 RNASE13Q5GAN3 156 aaKnown RBP11.57□□□□□ -0.56
CHERP-204ENST00000546538 BORCS7Q96B45 105 aa11.57□□□□□ -0.56
CHERP-204ENST00000546538 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
CHERP-204ENST00000546538 ZNF727A8MUV8 499 aa11.56□□□□□ -0.56
CHERP-204ENST00000546538 SYCNQ0VAF6 134 aa11.56□□□□□ -0.56
CHERP-204ENST00000546538 SRSF9Q13242 221 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHERP-204ENST00000546538 UBE2D4Q9Y2X8 147 aa11.56□□□□□ -0.56
CHERP-204ENST00000546538 FAM104AQ969W3 186 aa11.55□□□□□ -0.56
CHERP-204ENST00000546538 IGLV4-69A0A075B6H9 119 aa11.54□□□□□ -0.56
CHERP-204ENST00000546538 C9JQL5 133 aa11.54□□□□□ -0.56
CHERP-204ENST00000546538 CAMPP49913 170 aa11.54□□□□□ -0.56
CHERP-204ENST00000546538 PTTG1IPP53801 180 aa11.54□□□□□ -0.56
CHERP-204ENST00000546538 KRTAP10-8P60410 259 aa11.54□□□□□ -0.56
CHERP-204ENST00000546538 CLLU1Q5K131 121 aa11.54□□□□□ -0.56
CHERP-204ENST00000546538 ISOC2Q96AB3 205 aa11.54□□□□□ -0.56
CHERP-204ENST00000546538 LINC00474Q9P2X8 69 aa11.54□□□□□ -0.56
CHERP-204ENST00000546538 A0A0J9YXV3 536 aa11.53□□□□□ -0.56
CHERP-204ENST00000546538 A0A1W2PNN7 141 aa11.53□□□□□ -0.56
CHERP-204ENST00000546538 VCYO14598 125 aa11.53□□□□□ -0.56
CHERP-204ENST00000546538 SUMO2P61956 95 aaKnown RBP11.53□□□□□ -0.56
CHERP-204ENST00000546538 CSDC2Q9Y534 153 aaKnown RBP11.53□□□□□ -0.56
CHERP-204ENST00000546538 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.56
CHERP-204ENST00000546538 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.56
CHERP-204ENST00000546538 Q6ZUT4 128 aa11.52□□□□□ -0.56
CHERP-204ENST00000546538 RPL23P62829 140 aaKnown RBP11.52□□□□□ -0.57
CHERP-204ENST00000546538 SPINK6Q6UWN8 80 aa11.52□□□□□ -0.57
CHERP-204ENST00000546538 COX7A2LO14548 114 aa11.51□□□□□ -0.57
CHERP-204ENST00000546538 FCER1GP30273 86 aa11.51□□□□□ -0.57
CHERP-204ENST00000546538 GAGE2BQ13066 116 aa11.51□□□□□ -0.57
CHERP-204ENST00000546538 RIGQ13278 110 aa11.51□□□□□ -0.57
CHERP-204ENST00000546538 TRAV13-1A0A0B4J241 112 aa11.5□□□□□ -0.57
CHERP-204ENST00000546538 C1orf196B1AJZ1 125 aa11.5□□□□□ -0.57
CHERP-204ENST00000546538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.5□□□□□ -0.57
CHERP-204ENST00000546538 NDUFA5Q16718 116 aa11.5□□□□□ -0.57
CHERP-204ENST00000546538 FAM104BQ5XKR9 115 aa11.5□□□□□ -0.57
CHERP-204ENST00000546538 SRSF3P84103 164 aaKnown RBP11.49□□□□□ -0.57
CHERP-204ENST00000546538 Q6ZRP5 223 aa11.49□□□□□ -0.57
CHERP-204ENST00000546538 C5orf38Q86SI9 138 aa11.49□□□□□ -0.57
CHERP-204ENST00000546538 NAT8BQ9UHF3 227 aa11.49□□□□□ -0.57
CHERP-204ENST00000546538 LOC107984640A0A0U1RRK4 108 aa11.48□□□□□ -0.57
CHERP-204ENST00000546538 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
CHERP-204ENST00000546538 RPL39P62891 51 aaKnown RBP11.48□□□□□ -0.57
CHERP-204ENST00000546538 TMEM241Q24JQ0 296 aa11.48□□□□□ -0.57
CHERP-204ENST00000546538 PKIGQ9Y2B9 76 aa11.48□□□□□ -0.57
CHERP-204ENST00000546538 LPAP08519 4548 aa11.48□□□□□ -0.57
CHERP-204ENST00000546538 MALP21145 153 aa11.47□□□□□ -0.57
CHERP-204ENST00000546538 FAM74A3Q4VXF1 159 aa11.47□□□□□ -0.57
CHERP-204ENST00000546538 TIMM21Q9BVV7 248 aa11.47□□□□□ -0.57
CHERP-204ENST00000546538 TRBV24-1A0A075B6N3 115 aa11.46□□□□□ -0.57
CHERP-204ENST00000546538 APOMO95445 188 aa11.46□□□□□ -0.57
CHERP-204ENST00000546538 C2orf48Q96LS8 159 aa11.46□□□□□ -0.57
CHERP-204ENST00000546538 CAMK2N2Q96S95 79 aa11.46□□□□□ -0.57
CHERP-204ENST00000546538 KIR2DL4Q99706 377 aa11.46□□□□□ -0.57
CHERP-204ENST00000546538 OPRPNQ99935 248 aaPredicted RBP11.46□□□□□ -0.57
CHERP-204ENST00000546538 PPP1R17O96001 155 aa11.45□□□□□ -0.58
CHERP-204ENST00000546538 ADIRFQ15847 76 aa11.45□□□□□ -0.58
CHERP-204ENST00000546538 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
CHERP-204ENST00000546538 LINC00862A6NCI5 91 aa11.44□□□□□ -0.58
CHERP-204ENST00000546538 C20orf78Q9BR46 151 aa11.44□□□□□ -0.58
CHERP-204ENST00000546538 PSORS1C2Q9UIG4 136 aa11.44□□□□□ -0.58
CHERP-204ENST00000546538 PPP1R2P9O14990 202 aa11.43□□□□□ -0.58
CHERP-204ENST00000546538 RPL32P62910 135 aaKnown RBP11.43□□□□□ -0.58
CHERP-204ENST00000546538 REG3GQ6UW15 175 aa11.43□□□□□ -0.58
CHERP-204ENST00000546538 TNFRSF6BO95407 300 aa11.43□□□□□ -0.58
CHERP-204ENST00000546538 SPAG11BQ08648 103 aa11.43□□□□□ -0.58
CHERP-204ENST00000546538 PHF5AQ7RTV0 110 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms