RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 DEFB104AQ8WTQ1 72 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 C20orf78Q9BR46 151 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 CHCHD5Q9BSY4 110 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 Q9H8V8 135 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 LAMTOR2Q9Y2Q5 125 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 CHTOPQ9Y3Y2 248 aaKnown RBP4.3□□□□□ -1.72
PRKDC-211ENST00000546304 EPPK1P58107 5090 aaKnown RBP4.29□□□□□ -1.72
PRKDC-211ENST00000546304 I3L3M4 83 aa4.29□□□□□ -1.72
PRKDC-211ENST00000546304 POLR2KP53803 58 aaKnown RBP4.29□□□□□ -1.72
PRKDC-211ENST00000546304 PKIAP61925 76 aa4.29□□□□□ -1.72
PRKDC-211ENST00000546304 KIAA1644Q3SXP7 199 aa4.29□□□□□ -1.72
PRKDC-211ENST00000546304 MPV17L2Q567V2 206 aa4.29□□□□□ -1.72
PRKDC-211ENST00000546304 Q6ZR54 194 aa4.29□□□□□ -1.72
PRKDC-211ENST00000546304 NIT1Q86X76 327 aa4.29□□□□□ -1.72
PRKDC-211ENST00000546304 C10orf126Q8N4M7 172 aa4.29□□□□□ -1.72
PRKDC-211ENST00000546304 KIR2DL4Q99706 377 aa4.29□□□□□ -1.72
PRKDC-211ENST00000546304 CHCHD7Q9BUK0 85 aa4.29□□□□□ -1.72
PRKDC-211ENST00000546304 MAP1LC3AQ9H492 121 aa4.29□□□□□ -1.72
PRKDC-211ENST00000546304 DNAH5Q8TE73 4624 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 PKD1P98161 4303 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 A0A087WX48 190 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 K7EP13 123 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 M0R2N4 97 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 VCYO14598 125 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 SCO1O75880 301 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 IGHV3-30P01768 117 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 IGHV3-33P01772 117 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 IGHV3-30-3P0DP02 117 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 IGHV3-30-5P0DP03 117 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 VPREB1P12018 145 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 PMCHP20382 165 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 S100A1P23297 94 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 FCER1GP30273 86 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 FABP9Q0Z7S8 132 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 TRAPPC1Q9Y5R8 145 aa4.28□□□□□ -1.72
PRKDC-211ENST00000546304 DYNC1H1Q14204 4646 aaKnown RBP4.27□□□□□ -1.73
PRKDC-211ENST00000546304 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.27□□□□□ -1.73
PRKDC-211ENST00000546304 TRAV9-2A0A087WT02 112 aa4.27□□□□□ -1.73
PRKDC-211ENST00000546304 LOC389332A0A1B0GUA5 103 aa4.27□□□□□ -1.73
PRKDC-211ENST00000546304 IGKV2-29A2NJV5 120 aaPredicted RBP4.27□□□□□ -1.73
PRKDC-211ENST00000546304 UBE2L6O14933 153 aa4.27□□□□□ -1.73
PRKDC-211ENST00000546304 TCAPO15273 167 aa4.27□□□□□ -1.73
PRKDC-211ENST00000546304 GAGE6Q13070 117 aa4.27□□□□□ -1.73
PRKDC-211ENST00000546304 LAGE3Q14657 143 aa4.27□□□□□ -1.73
PRKDC-211ENST00000546304 ALKBH7Q9BT30 221 aaPredicted RBP4.27□□□□□ -1.73
PRKDC-211ENST00000546304 NXT2Q9NPJ8 142 aaKnown RBP4.27□□□□□ -1.73
PRKDC-211ENST00000546304 TMEM262E9PQX1 116 aa4.26□□□□□ -1.73
PRKDC-211ENST00000546304 ESDP10768 282 aa4.26□□□□□ -1.73
PRKDC-211ENST00000546304 RAB5AP20339 215 aa4.26□□□□□ -1.73
PRKDC-211ENST00000546304 RBX1P62877 108 aa4.26□□□□□ -1.73
PRKDC-211ENST00000546304 SERTAD4-AS1Q5TG53 156 aa4.26□□□□□ -1.73
PRKDC-211ENST00000546304 AMMECR1LQ6DCA0 310 aa4.26□□□□□ -1.73
PRKDC-211ENST00000546304 C6orf223Q8N319 242 aa4.26□□□□□ -1.73
PRKDC-211ENST00000546304 Q8N8P6 123 aa4.26□□□□□ -1.73
PRKDC-211ENST00000546304 Q8N976 141 aa4.26□□□□□ -1.73
PRKDC-211ENST00000546304 COLCA2A8K830 154 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 IBA57-AS1B1ANH7 110 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 H7C423 109 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 K7EMI3 77 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 CRPP02741 224 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 ANGP03950 147 aaKnown RBP4.25□□□□□ -1.73
PRKDC-211ENST00000546304 FGF6P10767 208 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 ZNF25P17030 456 aaPredicted RBP4.25□□□□□ -1.73
PRKDC-211ENST00000546304 IFI27P40305 119 aaPredicted RBP4.25□□□□□ -1.73
PRKDC-211ENST00000546304 C1orf134Q5TEV5 83 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 RNASEKQ6P5S7 137 aaKnown RBP4.25□□□□□ -1.73
PRKDC-211ENST00000546304 CLPSL2Q6UWE3 100 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 MRPL52Q86TS9 123 aaKnown RBP4.25□□□□□ -1.73
PRKDC-211ENST00000546304 C20orf203Q8NBC4 194 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 C18orf32Q8TCD1 76 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 Q9HAA7 133 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 KLK12Q9UKR0 248 aa4.25□□□□□ -1.73
PRKDC-211ENST00000546304 IGLV4-60A0A075B6I1 120 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 A0A1B0GUV1 79 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 F8WDY8 70 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 TRGC2P03986 189 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 RPL39P62891 51 aaKnown RBP4.24□□□□□ -1.73
PRKDC-211ENST00000546304 SMAGPQ0VAQ4 97 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 ORMDL2Q53FV1 153 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 Q6ZUT4 128 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 FA2HQ7L5A8 372 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 NFE4Q86UQ8 179 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 LINC00269Q8N2A0 174 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 OR5A1Q8NGJ0 315 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 PRSS3P2Q8NHM4 247 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 UBE2WQ96B02 151 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 TMEM18Q96B42 140 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 VCX2Q9H322 139 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 PRR34Q9NV39 138 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 UBE2D4Q9Y2X8 147 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 LRP1BQ9NZR2 4599 aa4.24□□□□□ -1.73
PRKDC-211ENST00000546304 TRAV8-3A0A0A6YYJ7 113 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 LINC01546A6NGU7 62 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 RTL8CO15255 209 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 REG3AQ06141 175 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 Q0VG73 95 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 MIAQ16674 131 aa4.23□□□□□ -1.73
PRKDC-211ENST00000546304 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms