RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 MAPKAPK5-AS1Q8N8E1 139 aa13.82□□□□□ -0.2
SCARB1-211ENST00000546215 C1orf43Q9BWL3 253 aa13.82□□□□□ -0.2
SCARB1-211ENST00000546215 CDC42SE2Q9NRR3 84 aa13.82□□□□□ -0.2
SCARB1-211ENST00000546215 COLCA2A8K830 154 aa13.81□□□□□ -0.2
SCARB1-211ENST00000546215 SMAGPQ0VAQ4 97 aa13.81□□□□□ -0.2
SCARB1-211ENST00000546215 TIMM21Q9BVV7 248 aa13.81□□□□□ -0.2
SCARB1-211ENST00000546215 ORMDL2Q53FV1 153 aa13.8□□□□□ -0.2
SCARB1-211ENST00000546215 PRSS3P2Q8NHM4 247 aa13.8□□□□□ -0.2
SCARB1-211ENST00000546215 A0A087WTM6 91 aa13.79□□□□□ -0.2
SCARB1-211ENST00000546215 LRCOL1A6NCL2 159 aa13.79□□□□□ -0.2
SCARB1-211ENST00000546215 DGAT2L7PQ6IED9 249 aa13.79□□□□□ -0.2
SCARB1-211ENST00000546215 ZNF664Q8N3J9 261 aa13.79□□□□□ -0.2
SCARB1-211ENST00000546215 TRAV8-4A0A0B4J246 113 aa13.79□□□□□ -0.2
SCARB1-211ENST00000546215 LINC01546A6NGU7 62 aa13.79□□□□□ -0.2
SCARB1-211ENST00000546215 KRTAP26-1Q6PEX3 210 aa13.79□□□□□ -0.2
SCARB1-211ENST00000546215 C18orf32Q8TCD1 76 aa13.79□□□□□ -0.2
SCARB1-211ENST00000546215 IGLV10-54A0A075B6I4 117 aa13.78□□□□□ -0.2
SCARB1-211ENST00000546215 IGKV3OR2-268A0A0C4DH90 116 aa13.77□□□□□ -0.21
SCARB1-211ENST00000546215 FAM104AQ969W3 186 aa13.77□□□□□ -0.21
SCARB1-211ENST00000546215 SPANXA1Q9NS26 97 aa13.77□□□□□ -0.21
SCARB1-211ENST00000546215 ATP6V1G1O75348 118 aa13.75□□□□□ -0.21
SCARB1-211ENST00000546215 TRGC2P03986 189 aa13.75□□□□□ -0.21
SCARB1-211ENST00000546215 C2orf66Q6UXQ4 117 aa13.75□□□□□ -0.21
SCARB1-211ENST00000546215 Q6ZUT4 128 aa13.75□□□□□ -0.21
SCARB1-211ENST00000546215 CYSLTR1Q9Y271 337 aa13.75□□□□□ -0.21
SCARB1-211ENST00000546215 PYGO1Q9Y3Y4 419 aa13.75□□□□□ -0.21
SCARB1-211ENST00000546215 S100A1P23297 94 aa13.75□□□□□ -0.21
SCARB1-211ENST00000546215 WFDC2Q14508 124 aa13.75□□□□□ -0.21
SCARB1-211ENST00000546215 RNASE13Q5GAN3 156 aaKnown RBP13.75□□□□□ -0.21
SCARB1-211ENST00000546215 BAALCQ8WXS3 180 aa13.75□□□□□ -0.21
SCARB1-211ENST00000546215 OPRPNQ99935 248 aaPredicted RBP13.75□□□□□ -0.21
SCARB1-211ENST00000546215 DNAH5Q8TE73 4624 aa13.74□□□□□ -0.21
SCARB1-211ENST00000546215 MRPS36P82909 103 aaKnown RBP13.74□□□□□ -0.21
SCARB1-211ENST00000546215 FA2HQ7L5A8 372 aa13.74□□□□□ -0.21
SCARB1-211ENST00000546215 URB1-AS1Q96HZ7 61 aa13.74□□□□□ -0.21
SCARB1-211ENST00000546215 DYNC1H1Q14204 4646 aaKnown RBP13.73□□□□□ -0.21
SCARB1-211ENST00000546215 LINC00959A0A1B0GUT2 108 aa13.73□□□□□ -0.21
SCARB1-211ENST00000546215 EREGO14944 169 aa13.73□□□□□ -0.21
SCARB1-211ENST00000546215 G0S2P27469 103 aa13.72□□□□□ -0.21
SCARB1-211ENST00000546215 LECT2O14960 151 aa13.71□□□□□ -0.21
SCARB1-211ENST00000546215 KRTAP10-2P60368 255 aa13.71□□□□□ -0.21
SCARB1-211ENST00000546215 SPATA12Q7Z6I5 190 aa13.71□□□□□ -0.21
SCARB1-211ENST00000546215 CHCHD10Q8WYQ3 142 aaPredicted RBP13.71□□□□□ -0.21
SCARB1-211ENST00000546215 TOMM6Q96B49 74 aa13.71□□□□□ -0.21
SCARB1-211ENST00000546215 IGLV4-3A0A075B6K6 122 aa13.71□□□□□ -0.22
SCARB1-211ENST00000546215 IGIPA6NJ69 53 aa13.71□□□□□ -0.22
SCARB1-211ENST00000546215 LINC00614P0C842 121 aa13.71□□□□□ -0.22
SCARB1-211ENST00000546215 AP5S1Q9NUS5 200 aa13.71□□□□□ -0.22
SCARB1-211ENST00000546215 Q8N814 137 aa13.7□□□□□ -0.22
SCARB1-211ENST00000546215 GAGE12HA6NDE8 117 aa13.68□□□□□ -0.22
SCARB1-211ENST00000546215 CCL25O15444 150 aa13.68□□□□□ -0.22
SCARB1-211ENST00000546215 RAB5BP61020 215 aa13.68□□□□□ -0.22
SCARB1-211ENST00000546215 SS18Q15532 418 aa13.68□□□□□ -0.22
SCARB1-211ENST00000546215 TRAV13-1A0A0B4J241 112 aa13.67□□□□□ -0.22
SCARB1-211ENST00000546215 C1orf196B1AJZ1 125 aa13.67□□□□□ -0.22
SCARB1-211ENST00000546215 NPSP0C0P6 89 aa13.67□□□□□ -0.22
SCARB1-211ENST00000546215 TMEM141Q96I45 108 aa13.67□□□□□ -0.22
SCARB1-211ENST00000546215 XCL1P47992 114 aa13.66□□□□□ -0.22
SCARB1-211ENST00000546215 TIMM17AQ99595 171 aa13.66□□□□□ -0.22
SCARB1-211ENST00000546215 BIRC6Q9NR09 4857 aa13.66□□□□□ -0.22
SCARB1-211ENST00000546215 USP17L23D6RBM5 183 aa13.66□□□□□ -0.22
SCARB1-211ENST00000546215 FUSP35637 526 aaKnown RBP eCLIP13.66□□□□□ -0.223e-6■■□□□ 13.4
SCARB1-211ENST00000546215 FOXI1Q12951 378 aa13.66□□□□□ -0.22
SCARB1-211ENST00000546215 PGPEP1Q9NXJ5 209 aa13.66□□□□□ -0.22
SCARB1-211ENST00000546215 LRP1BQ9NZR2 4599 aa13.66□□□□□ -0.22
SCARB1-211ENST00000546215 A0A096LNJ9 63 aa13.65□□□□□ -0.22
SCARB1-211ENST00000546215 LINC01549A6NIU2 74 aa13.65□□□□□ -0.22
SCARB1-211ENST00000546215 CD164L2Q6UWJ8 174 aa13.65□□□□□ -0.22
SCARB1-211ENST00000546215 ERASQ7Z444 233 aa13.65□□□□□ -0.22
SCARB1-211ENST00000546215 SCGB3A1Q96QR1 104 aa13.64□□□□□ -0.23
SCARB1-211ENST00000546215 AMELXQ99217 191 aa13.64□□□□□ -0.23
SCARB1-211ENST00000546215 IFITM10A6NMD0 228 aa13.63□□□□□ -0.23
SCARB1-211ENST00000546215 TEX43Q6ZNM6 134 aa13.63□□□□□ -0.23
SCARB1-211ENST00000546215 LINC00173Q6ZV60 143 aa13.63□□□□□ -0.23
SCARB1-211ENST00000546215 PMCHL1Q16048 86 aa13.62□□□□□ -0.23
SCARB1-211ENST00000546215 ZC2HC1BQ5TFG8 222 aa13.62□□□□□ -0.23
SCARB1-211ENST00000546215 Q6ZN92 141 aa13.62□□□□□ -0.23
SCARB1-211ENST00000546215 CHCHD1Q96BP2 118 aaKnown RBP13.62□□□□□ -0.23
SCARB1-211ENST00000546215 VCX2Q9H322 139 aa13.62□□□□□ -0.23
SCARB1-211ENST00000546215 C14orf177Q52M58 125 aa13.62□□□□□ -0.23
SCARB1-211ENST00000546215 CDPF1Q6NVV7 123 aa13.62□□□□□ -0.23
SCARB1-211ENST00000546215 NTN5Q8WTR8 489 aaPredicted RBP13.62□□□□□ -0.23
SCARB1-211ENST00000546215 PAPPA-AS1Q5QFB9 102 aa13.61□□□□□ -0.23
SCARB1-211ENST00000546215 BAGE3Q86Y29 109 aa13.61□□□□□ -0.23
SCARB1-211ENST00000546215 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.6□□□□□ -0.23
SCARB1-211ENST00000546215 C16orf90A8MZG2 172 aa13.6□□□□□ -0.23
SCARB1-211ENST00000546215 HBDP02042 147 aa13.6□□□□□ -0.23
SCARB1-211ENST00000546215 PRSS1P07477 247 aa13.6□□□□□ -0.23
SCARB1-211ENST00000546215 UBE2D1P51668 147 aa13.59□□□□□ -0.23
SCARB1-211ENST00000546215 C15orf56Q8N910 161 aa13.59□□□□□ -0.23
SCARB1-211ENST00000546215 C2orf88Q9BSF0 95 aa13.59□□□□□ -0.23
SCARB1-211ENST00000546215 IGLV5-52A0A0A0MRZ9 124 aa13.58□□□□□ -0.24
SCARB1-211ENST00000546215 LINC00310P59036 64 aa13.58□□□□□ -0.24
SCARB1-211ENST00000546215 PDZD11Q5EBL8 140 aa13.58□□□□□ -0.24
SCARB1-211ENST00000546215 LINC00242Q5T6M2 205 aa13.58□□□□□ -0.24
SCARB1-211ENST00000546215 IGHV3OR16-9A0A0B4J2B5 98 aa13.57□□□□□ -0.24
SCARB1-211ENST00000546215 CFAP161Q6P656 301 aa13.57□□□□□ -0.24
SCARB1-211ENST00000546215 hDV102S1A0JD36 115 aa13.55□□□□□ -0.24
SCARB1-211ENST00000546215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-211ENST00000546215 COX7A2LO14548 114 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms