RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CFAP161Q6P656 301 aa10.25□□□□□ -0.77
SRP54-202ENST00000546080 PRORYQ9H606 182 aa10.25□□□□□ -0.77
SRP54-202ENST00000546080 C9orf153Q5TBE3 101 aa10.24□□□□□ -0.77
SRP54-202ENST00000546080 PRIMA1Q86XR5 153 aa10.24□□□□□ -0.77
SRP54-202ENST00000546080 DOPEY2Q9Y3R5 2298 aa10.24□□□□□ -0.77
SRP54-202ENST00000546080 NBASA2RRP1 2371 aa10.24□□□□□ -0.77
SRP54-202ENST00000546080 IGHV4-30-2A0A087WSY4 118 aa10.24□□□□□ -0.77
SRP54-202ENST00000546080 SMIM1B2RUZ4 78 aa10.24□□□□□ -0.77
SRP54-202ENST00000546080 AVPP01185 164 aa10.24□□□□□ -0.77
SRP54-202ENST00000546080 BEAN1Q3B7T3 259 aa10.24□□□□□ -0.77
SRP54-202ENST00000546080 C3orf22Q8N5N4 141 aa10.24□□□□□ -0.77
SRP54-202ENST00000546080 CCL19Q99731 98 aa10.24□□□□□ -0.77
SRP54-202ENST00000546080 NACAE9PAV3 2078 aa10.23□□□□□ -0.77
SRP54-202ENST00000546080 A8MTW9 85 aa10.23□□□□□ -0.77
SRP54-202ENST00000546080 PEMTQ9UBM1 199 aa10.23□□□□□ -0.77
SRP54-202ENST00000546080 ATRXP46100 2492 aa10.23□□□□□ -0.77
SRP54-202ENST00000546080 ATP5G1P05496 136 aa10.22□□□□□ -0.77
SRP54-202ENST00000546080 VPS13CQ709C8 3753 aa10.22□□□□□ -0.77
SRP54-202ENST00000546080 DEFB112Q30KQ8 113 aa10.22□□□□□ -0.77
SRP54-202ENST00000546080 UQCRQO14949 82 aa10.21□□□□□ -0.77
SRP54-202ENST00000546080 RS1O15537 224 aa10.21□□□□□ -0.77
SRP54-202ENST00000546080 INAFM2P0DMQ5 153 aa10.21□□□□□ -0.77
SRP54-202ENST00000546080 LY6DQ14210 128 aa10.21□□□□□ -0.77
SRP54-202ENST00000546080 C11orf72Q8NBR9 251 aa10.21□□□□□ -0.77
SRP54-202ENST00000546080 TRAV13-1A0A0B4J241 112 aa10.21□□□□□ -0.78
SRP54-202ENST00000546080 CXCL5P42830 114 aa10.21□□□□□ -0.78
SRP54-202ENST00000546080 ATP5J2P56134 94 aa10.21□□□□□ -0.78
SRP54-202ENST00000546080 FAM222AQ5U5X8 452 aa10.21□□□□□ -0.78
SRP54-202ENST00000546080 SDIM1Q6ZPB5 146 aa10.21□□□□□ -0.78
SRP54-202ENST00000546080 FAM218AQ96MZ4 157 aa10.21□□□□□ -0.78
SRP54-202ENST00000546080 NDUFA7O95182 113 aa10.2□□□□□ -0.78
SRP54-202ENST00000546080 GAGE2AQ6NT46 116 aa10.2□□□□□ -0.78
SRP54-202ENST00000546080 FAM19A3Q7Z5A8 133 aa10.2□□□□□ -0.78
SRP54-202ENST00000546080 AKAP6Q13023 2319 aa10.2□□□□□ -0.78
SRP54-202ENST00000546080 SPTAN1Q13813 2472 aaKnown RBP10.2□□□□□ -0.78
SRP54-202ENST00000546080 LINC00694P0DN24 101 aa10.19□□□□□ -0.78
SRP54-202ENST00000546080 VPREB3Q9UKI3 123 aa10.19□□□□□ -0.78
SRP54-202ENST00000546080 C22orf24Q9Y442 160 aa10.19□□□□□ -0.78
SRP54-202ENST00000546080 IGSF10Q6WRI0 2623 aa10.19□□□□□ -0.78
SRP54-202ENST00000546080 B4DSR2 109 aa10.19□□□□□ -0.78
SRP54-202ENST00000546080 UBE2E2Q96LR5 201 aa10.19□□□□□ -0.78
SRP54-202ENST00000546080 ZFYVE26Q68DK2 2539 aa10.18□□□□□ -0.78
SRP54-202ENST00000546080 C5orf38Q86SI9 138 aa10.18□□□□□ -0.78
SRP54-202ENST00000546080 INSP01308 110 aa10.18□□□□□ -0.78
SRP54-202ENST00000546080 MALP21145 153 aa10.18□□□□□ -0.78
SRP54-202ENST00000546080 SLURP1P55000 103 aa10.18□□□□□ -0.78
SRP54-202ENST00000546080 HIST2H2BCQ6DN03 193 aa10.18□□□□□ -0.78
SRP54-202ENST00000546080 HIST2H2BDQ6DRA6 164 aa10.18□□□□□ -0.78
SRP54-202ENST00000546080 LINC00526Q96FQ7 95 aa10.18□□□□□ -0.78
SRP54-202ENST00000546080 Q9HAA7 133 aa10.18□□□□□ -0.78
SRP54-202ENST00000546080 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
SRP54-202ENST00000546080 CRPP02741 224 aa10.16□□□□□ -0.78
SRP54-202ENST00000546080 PF4P02776 101 aa10.16□□□□□ -0.78
SRP54-202ENST00000546080 PPDPFQ9H3Y8 114 aa10.16□□□□□ -0.78
SRP54-202ENST00000546080 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
SRP54-202ENST00000546080 F5H768 121 aa10.16□□□□□ -0.78
SRP54-202ENST00000546080 DEFB136Q30KP8 78 aa10.16□□□□□ -0.78
SRP54-202ENST00000546080 MAP6D1Q9H9H5 199 aa10.16□□□□□ -0.78
SRP54-202ENST00000546080 CFAP46Q8IYW2 2715 aa10.15□□□□□ -0.78
SRP54-202ENST00000546080 RPL28P46779 137 aaKnown RBP10.15□□□□□ -0.78
SRP54-202ENST00000546080 COX7CP15954 63 aa10.15□□□□□ -0.79
SRP54-202ENST00000546080 RPL36AP83881 106 aaKnown RBP10.15□□□□□ -0.79
SRP54-202ENST00000546080 RPL36ALQ969Q0 106 aaKnown RBP10.15□□□□□ -0.79
SRP54-202ENST00000546080 OVOL2Q9BRP0 275 aa10.15□□□□□ -0.79
SRP54-202ENST00000546080 DNAL4O96015 105 aa10.14□□□□□ -0.79
SRP54-202ENST00000546080 SORL1Q92673 2214 aa10.14□□□□□ -0.79
SRP54-202ENST00000546080 GNLYP22749 145 aa10.14□□□□□ -0.79
SRP54-202ENST00000546080 CDC42SE2Q9NRR3 84 aa10.14□□□□□ -0.79
SRP54-202ENST00000546080 TRGV1A0A0A0MS02 117 aa10.13□□□□□ -0.79
SRP54-202ENST00000546080 K7EQD1 137 aa10.13□□□□□ -0.79
SRP54-202ENST00000546080 NTM-AS1Q6ZSK4 140 aa10.13□□□□□ -0.79
SRP54-202ENST00000546080 C18orf65Q6ZTR6 163 aa10.13□□□□□ -0.79
SRP54-202ENST00000546080 HIVEP3Q5T1R4 2406 aa10.13□□□□□ -0.79
SRP54-202ENST00000546080 ATOX1O00244 68 aa10.12□□□□□ -0.79
SRP54-202ENST00000546080 DYNLRB2Q8TF09 96 aa10.12□□□□□ -0.79
SRP54-202ENST00000546080 ZNF702PQ9H963 129 aa10.12□□□□□ -0.79
SRP54-202ENST00000546080 COL12A1Q99715 3063 aa10.12□□□□□ -0.79
SRP54-202ENST00000546080 MIR7-3HGQ8N6C7 128 aa10.12□□□□□ -0.79
SRP54-202ENST00000546080 LINC00337Q8N6G1 96 aa10.12□□□□□ -0.79
SRP54-202ENST00000546080 TRBV10-1A0A0K0K1A3 114 aa10.11□□□□□ -0.79
SRP54-202ENST00000546080 UBE2L6O14933 153 aa10.11□□□□□ -0.79
SRP54-202ENST00000546080 Q96MF0 132 aa10.11□□□□□ -0.79
SRP54-202ENST00000546080 SND1-IT1Q9HBX3 110 aa10.11□□□□□ -0.79
SRP54-202ENST00000546080 XCL2Q9UBD3 114 aa10.11□□□□□ -0.79
SRP54-202ENST00000546080 KLK5Q9Y337 293 aaPredicted RBP10.11□□□□□ -0.79
SRP54-202ENST00000546080 KMT2BQ9UMN6 2715 aaPredicted RBP10.11□□□□□ -0.79
SRP54-202ENST00000546080 CHD6Q8TD26 2715 aa10.11□□□□□ -0.79
SRP54-202ENST00000546080 HIST1H4AP62805 103 aaKnown RBP10.11□□□□□ -0.79
SRP54-202ENST00000546080 NRGNQ92686 78 aa10.11□□□□□ -0.79
SRP54-202ENST00000546080 C2orf48Q96LS8 159 aa10.11□□□□□ -0.79
SRP54-202ENST00000546080 A0A087WYN8 130 aa10.1□□□□□ -0.79
SRP54-202ENST00000546080 IGKV2-28A0A075B6P5 120 aa10.09□□□□□ -0.79
SRP54-202ENST00000546080 IGKV2D-28P01615 120 aa10.09□□□□□ -0.79
SRP54-202ENST00000546080 CRYGAP11844 174 aa10.09□□□□□ -0.79
SRP54-202ENST00000546080 SMIM11BQ8TCY0 68 aa10.09□□□□□ -0.79
SRP54-202ENST00000546080 COX7B2Q8TF08 81 aa10.09□□□□□ -0.79
SRP54-202ENST00000546080 LINC01356Q8N9X3 169 aa10.09□□□□□ -0.79
SRP54-202ENST00000546080 C14orf132Q9NPU4 83 aa10.09□□□□□ -0.79
SRP54-202ENST00000546080 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
SRP54-202ENST00000546080 CRYBG3Q68DQ2 2970 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms