RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 IGIPA6NJ69 53 aa9.2□□□□□ -0.94
COL4A6-209ENST00000545689 ZNF843Q8N446 348 aa9.2□□□□□ -0.94
COL4A6-209ENST00000545689 ABCA1O95477 2261 aa9.2□□□□□ -0.94
COL4A6-209ENST00000545689 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
COL4A6-209ENST00000545689 KIAA1549Q9HCM3 1950 aa9.19□□□□□ -0.94
COL4A6-209ENST00000545689 RBX1P62877 108 aa9.19□□□□□ -0.94
COL4A6-209ENST00000545689 DEFB131BA0A096LNP1 70 aa9.19□□□□□ -0.94
COL4A6-209ENST00000545689 SHISA2Q6UWI4 295 aa9.19□□□□□ -0.94
COL4A6-209ENST00000545689 RNF183Q96D59 192 aa9.19□□□□□ -0.94
COL4A6-209ENST00000545689 CPAMD8Q8IZJ3 1885 aa9.19□□□□□ -0.94
COL4A6-209ENST00000545689 CHKB-CPT1BH3BT56 60 aa9.18□□□□□ -0.94
COL4A6-209ENST00000545689 UBE2D3P61077 147 aa9.18□□□□□ -0.94
COL4A6-209ENST00000545689 UBE2D2P62837 147 aa9.18□□□□□ -0.94
COL4A6-209ENST00000545689 NBASA2RRP1 2371 aa9.18□□□□□ -0.94
COL4A6-209ENST00000545689 LELP1Q5T871 98 aa9.18□□□□□ -0.94
COL4A6-209ENST00000545689 LINC01006Q8NI28 216 aa9.18□□□□□ -0.94
COL4A6-209ENST00000545689 LINC00959A0A1B0GUT2 108 aa9.17□□□□□ -0.94
COL4A6-209ENST00000545689 C3orf22Q8N5N4 141 aa9.17□□□□□ -0.94
COL4A6-209ENST00000545689 NACAE9PAV3 2078 aa9.17□□□□□ -0.94
COL4A6-209ENST00000545689 CREBBPQ92793 2442 aa9.17□□□□□ -0.94
COL4A6-209ENST00000545689 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
COL4A6-209ENST00000545689 NDUFA7O95182 113 aa9.16□□□□□ -0.94
COL4A6-209ENST00000545689 FAM110AQ9BQ89 295 aa9.16□□□□□ -0.94
COL4A6-209ENST00000545689 GAS8-AS1O95177 125 aa9.16□□□□□ -0.94
COL4A6-209ENST00000545689 Q8IZM0 81 aa9.16□□□□□ -0.94
COL4A6-209ENST00000545689 BBC3Q96PG8 261 aaPredicted RBP9.16□□□□□ -0.94
COL4A6-209ENST00000545689 SYCNQ0VAF6 134 aa9.16□□□□□ -0.94
COL4A6-209ENST00000545689 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.94
COL4A6-209ENST00000545689 CDC42SE2Q9NRR3 84 aa9.15□□□□□ -0.94
COL4A6-209ENST00000545689 ANKHD1Q8IWZ3 2542 aaKnown RBP9.15□□□□□ -0.94
COL4A6-209ENST00000545689 M0R378 163 aa9.15□□□□□ -0.94
COL4A6-209ENST00000545689 TRAV10A0A0B4J240 114 aa9.15□□□□□ -0.95
COL4A6-209ENST00000545689 CLUHP3Q96NS8 147 aa9.14□□□□□ -0.95
COL4A6-209ENST00000545689 C6orf99Q4VX62 202 aa9.14□□□□□ -0.95
COL4A6-209ENST00000545689 Q6ZS46 218 aa9.14□□□□□ -0.95
COL4A6-209ENST00000545689 PLCE1Q9P212 2302 aa9.14□□□□□ -0.95
COL4A6-209ENST00000545689 DHRS4-AS1Q9P1J3 65 aa9.14□□□□□ -0.95
COL4A6-209ENST00000545689 INAFM1C9JVW0 142 aa9.14□□□□□ -0.95
COL4A6-209ENST00000545689 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
COL4A6-209ENST00000545689 SLPIP03973 132 aa9.13□□□□□ -0.95
COL4A6-209ENST00000545689 HCFC1P51610 2035 aa9.13□□□□□ -0.95
COL4A6-209ENST00000545689 H0Y9J4 135 aa9.13□□□□□ -0.95
COL4A6-209ENST00000545689 ZFHX2Q9C0A1 2572 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-209ENST00000545689 LINC00482Q8N8I6 264 aa9.13□□□□□ -0.95
COL4A6-209ENST00000545689 IGLV4-69A0A075B6H9 119 aa9.12□□□□□ -0.95
COL4A6-209ENST00000545689 ATP5EP56381 51 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-209ENST00000545689 C18orf65Q6ZTR6 163 aa9.12□□□□□ -0.95
COL4A6-209ENST00000545689 A8MZ25 164 aa9.12□□□□□ -0.95
COL4A6-209ENST00000545689 FAM240AA0A1B0GVK7 77 aa9.12□□□□□ -0.95
COL4A6-209ENST00000545689 FAM19A1Q7Z5A9 133 aa9.12□□□□□ -0.95
COL4A6-209ENST00000545689 CDSNQ15517 529 aa9.12□□□□□ -0.95
COL4A6-209ENST00000545689 ENHOQ6UWT2 76 aa9.12□□□□□ -0.95
COL4A6-209ENST00000545689 FAM236DA0A1B0GTK5 79 aa9.11□□□□□ -0.95
COL4A6-209ENST00000545689 FAM236CP0DP71 79 aa9.11□□□□□ -0.95
COL4A6-209ENST00000545689 C5orf47Q569G3 176 aa9.11□□□□□ -0.95
COL4A6-209ENST00000545689 SMIM11BQ8TCY0 68 aa9.11□□□□□ -0.95
COL4A6-209ENST00000545689 LY6G6DO95868 133 aa9.11□□□□□ -0.95
COL4A6-209ENST00000545689 Q6Q795 121 aa9.11□□□□□ -0.95
COL4A6-209ENST00000545689 NDUFC1O43677 76 aa9.11□□□□□ -0.95
COL4A6-209ENST00000545689 IGKV2-24A0A0C4DH68 120 aa9.1□□□□□ -0.95
COL4A6-209ENST00000545689 CHCHD7Q9BUK0 85 aa9.1□□□□□ -0.95
COL4A6-209ENST00000545689 HIGD2AQ9BW72 106 aa9.1□□□□□ -0.95
COL4A6-209ENST00000545689 CSDC2Q9Y534 153 aaKnown RBP9.1□□□□□ -0.95
COL4A6-209ENST00000545689 DSCAMO60469 2012 aa9.1□□□□□ -0.95
COL4A6-209ENST00000545689 LINC00242Q5T6M2 205 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-209ENST00000545689 LOC100131303A0A0U1RQF7 123 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 C20orf197Q8N268 126 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 MED13LQ71F56 2210 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 SERP2Q8N6R1 65 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 POM121L12Q8N7R1 296 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 XAGE1AQ9HD64 81 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 AVPP01185 164 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 ODF3L2Q3SX64 289 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 Q6JHZ5 121 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 AMELXQ99217 191 aa9.09□□□□□ -0.95
COL4A6-209ENST00000545689 IGLV2-18A0A075B6J9 118 aa9.08□□□□□ -0.96
COL4A6-209ENST00000545689 DOPEY2Q9Y3R5 2298 aa9.08□□□□□ -0.96
COL4A6-209ENST00000545689 KPRPQ5T749 579 aaPredicted RBP9.08□□□□□ -0.96
COL4A6-209ENST00000545689 C16orf95Q9H693 158 aa9.07□□□□□ -0.96
COL4A6-209ENST00000545689 EXPH5Q8NEV8 1989 aa9.07□□□□□ -0.96
COL4A6-209ENST00000545689 TNCP24821 2201 aa9.07□□□□□ -0.96
COL4A6-209ENST00000545689 CCKP06307 115 aa9.07□□□□□ -0.96
COL4A6-209ENST00000545689 BEAN1Q3B7T3 259 aa9.07□□□□□ -0.96
COL4A6-209ENST00000545689 SMIM1B2RUZ4 78 aa9.07□□□□□ -0.96
COL4A6-209ENST00000545689 A0A096LNJ9 63 aa9.06□□□□□ -0.96
COL4A6-209ENST00000545689 MUC6Q6W4X9 2439 aa9.06□□□□□ -0.96
COL4A6-209ENST00000545689 LOC107984640A0A0U1RRK4 108 aa9.06□□□□□ -0.96
COL4A6-209ENST00000545689 LINC01546A6NGU7 62 aa9.06□□□□□ -0.96
COL4A6-209ENST00000545689 Q6ZQY7 126 aa9.06□□□□□ -0.96
COL4A6-209ENST00000545689 IGLV1-51P01701 117 aa9.06□□□□□ -0.96
COL4A6-209ENST00000545689 RPL28P46779 137 aaKnown RBP9.06□□□□□ -0.96
COL4A6-209ENST00000545689 FAM19A5Q7Z5A7 132 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-209ENST00000545689 WFDC10AQ9H1F0 79 aa9.05□□□□□ -0.96
COL4A6-209ENST00000545689 ZNF706Q9Y5V0 76 aaPredicted RBP9.05□□□□□ -0.96
COL4A6-209ENST00000545689 ZNF73O43830 326 aaPredicted RBP9.05□□□□□ -0.96
COL4A6-209ENST00000545689 A0A087WZ39 114 aa9.05□□□□□ -0.96
COL4A6-209ENST00000545689 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
COL4A6-209ENST00000545689 M0QXV9 152 aa9.04□□□□□ -0.96
COL4A6-209ENST00000545689 XGP55808 180 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms