RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 G0S2P27469 103 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 S100GP29377 79 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 FUSP35637 526 aaKnown RBP eCLIP1.91□□□□□ -2.1
SNHG1-222ENST00000545308 SNCAP37840 140 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 RHOBP62745 196 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 PSMG4Q5JS54 123 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 LYRM7Q5U5X0 104 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 AADACL3Q5VUY0 350 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 TOMM20LQ6UXN7 152 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 BPIFA4PQ86YQ2 179 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 CANT1Q8WVQ1 401 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 LSM10Q969L4 123 aaKnown RBP1.91□□□□□ -2.1
SNHG1-222ENST00000545308 RNASE7Q9H1E1 156 aaKnown RBP1.91□□□□□ -2.1
SNHG1-222ENST00000545308 SH3BGRL3Q9H299 93 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 RPRMQ9NS64 109 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 UQCC1Q9NVA1 299 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 TP73-AS1Q9UF72 201 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 LY96Q9Y6Y9 160 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 E7EUB6 86 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 HLA-DRB4P13762 266 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 DEFA3P59666 94 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 RAB14P61106 215 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 ZNF90Q03938 601 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 ESRGQ1W209 222 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 IAH1Q2TAA2 248 aaPredicted RBP1.9□□□□□ -2.11
SNHG1-222ENST00000545308 LYZL1Q6UWQ5 148 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 FOXI2Q6ZQN5 318 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 OR4B1Q8NGF8 309 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 DCANP1Q8TF63 244 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 TOMM6Q96B49 74 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 NDUFA4L2Q9NRX3 87 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 CACFD1Q9UGQ2 172 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 PRNDQ9UKY0 176 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.11
SNHG1-222ENST00000545308 A0A0D9SG52 128 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 IGLC7A0M8Q6 106 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 TMEM14DPA8MWL7 114 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 J3QRK9 145 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 K7EIM0 57 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 IGKV1-5P01602 117 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 FABP1P07148 127 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 NFYAP23511 347 aaPredicted RBP1.89□□□□□ -2.11
SNHG1-222ENST00000545308 RPL28P46779 137 aaKnown RBP1.89□□□□□ -2.11
SNHG1-222ENST00000545308 CCL20P78556 96 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 PRCDQ00LT1 54 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 NDUFA5Q16718 116 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 C10orf55Q5SWW7 151 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 TRIQKQ629K1 86 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 DPPA3Q6W0C5 159 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
SNHG1-222ENST00000545308 OR13C6PQ8NH95 151 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 TMEM203Q969S6 136 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 SCGB3A1Q96QR1 104 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 PDCD10Q9BUL8 212 aa1.89□□□□□ -2.11
SNHG1-222ENST00000545308 HMSDA8MTL9 139 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 C1orf196B1AJZ1 125 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 H7C2G1 150 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 I3L2K1 104 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 CFDP00746 253 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-222ENST00000545308 SLC25A4P12235 298 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 ASIPP42127 132 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 GTF2A1P52655 376 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-222ENST00000545308 YPEL3P61236 119 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-222ENST00000545308 HSPE1P61604 102 aaKnown RBP1.88□□□□□ -2.11
SNHG1-222ENST00000545308 WT1-ASQ06250 92 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 RHEBQ15382 184 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 IBA57Q5T440 356 aaKnown RBP1.88□□□□□ -2.11
SNHG1-222ENST00000545308 KTN1-AS1Q86SY8 53 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 CLVS1Q8IUQ0 354 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-222ENST00000545308 FAM24BQ8N5W8 94 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 ARHGAP5-AS1Q96IT6 56 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 LINC00052Q96N35 136 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 Q9BRP9 147 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 DERL1Q9BUN8 251 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 PBDC1Q9BVG4 233 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 LPAR5Q9H1C0 372 aa1.88□□□□□ -2.11
SNHG1-222ENST00000545308 TRGV4A0A0C4DH28 118 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 TCRBV3S1A0A5B6 114 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 EFCAB10A6NFE3 127 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 H7BYZ3 331 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 PDCD5O14737 125 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 TRGC1P0CF51 173 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 RPL37AP61513 92 aaKnown RBP1.87□□□□□ -2.11
SNHG1-222ENST00000545308 HSD17B12Q53GQ0 312 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 KHDC3LQ587J8 217 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 C12orf45Q8N5I9 185 aaPredicted RBP1.87□□□□□ -2.11
SNHG1-222ENST00000545308 Q8N814 137 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 TMEM263Q8WUH6 116 aaKnown RBP1.87□□□□□ -2.11
SNHG1-222ENST00000545308 GPR146Q96CH1 333 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 DNAJC30Q96LL9 226 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 TXNDC17Q9BRA2 123 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 TAS2R8Q9NYW2 309 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 PRO0255Q9UI72 69 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 AP4S1Q9Y587 144 aa1.87□□□□□ -2.11
SNHG1-222ENST00000545308 FAT1Q14517 4588 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 TRGV2A0A075B6R0 118 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 TRAV7A0A075B6U4 112 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 A0A096LPF7 62 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 A0A0J9YY99 117 aa1.86□□□□□ -2.11
SNHG1-222ENST00000545308 LOC100130705A0A1B0GUX0 176 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms