RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 MRAP2Q96G30 205 aa17.17■□□□□ 0.34
PDCD2-211ENST00000544336 TMEM250H0YL14 139 aa17.16■□□□□ 0.34
PDCD2-211ENST00000544336 SS18Q15532 418 aa17.16■□□□□ 0.34
PDCD2-211ENST00000544336 LINC00474Q9P2X8 69 aa17.15■□□□□ 0.34
PDCD2-211ENST00000544336 ALKAL2Q6UX46 152 aa17.13■□□□□ 0.33
PDCD2-211ENST00000544336 PKIGQ9Y2B9 76 aa17.13■□□□□ 0.33
PDCD2-211ENST00000544336 ZNF561-AS1K7EIQ3 104 aa17.12■□□□□ 0.33
PDCD2-211ENST00000544336 CT83Q5H943 113 aa17.12■□□□□ 0.33
PDCD2-211ENST00000544336 CDC42SE2Q9NRR3 84 aa17.12■□□□□ 0.33
PDCD2-211ENST00000544336 A0A1B0GUT8 65 aa17.11■□□□□ 0.33
PDCD2-211ENST00000544336 BLOC1S1P78537 153 aa17.11■□□□□ 0.33
PDCD2-211ENST00000544336 SYCNQ0VAF6 134 aa17.11■□□□□ 0.33
PDCD2-211ENST00000544336 CD164L2Q6UWJ8 174 aa17.11■□□□□ 0.33
PDCD2-211ENST00000544336 ZNF664Q8N3J9 261 aa17.11■□□□□ 0.33
PDCD2-211ENST00000544336 HIGD1CA8MV81 97 aa17.1■□□□□ 0.33
PDCD2-211ENST00000544336 POLR2KP53803 58 aaKnown RBP17.1■□□□□ 0.33
PDCD2-211ENST00000544336 MRPL52Q86TS9 123 aaKnown RBP17.1■□□□□ 0.33
PDCD2-211ENST00000544336 TMEM191AQ9H0A3 160 aa17.1■□□□□ 0.33
PDCD2-211ENST00000544336 LRP2P98164 4655 aa17.1■□□□□ 0.33
PDCD2-211ENST00000544336 C7orf77A4D0Y5 90 aa17.09■□□□□ 0.33
PDCD2-211ENST00000544336 RAB4AP20338 218 aa17.09■□□□□ 0.33
PDCD2-211ENST00000544336 SPINK6Q6UWN8 80 aa17.09■□□□□ 0.33
PDCD2-211ENST00000544336 AMN1Q8IY45 258 aa17.09■□□□□ 0.33
PDCD2-211ENST00000544336 SMKR1H3BMG3 65 aa17.08■□□□□ 0.32
PDCD2-211ENST00000544336 TSKUQ8WUA8 353 aa17.08■□□□□ 0.32
PDCD2-211ENST00000544336 SMIM7Q9BQ49 75 aa17.08■□□□□ 0.32
PDCD2-211ENST00000544336 A0A0J9YXV3 536 aa17.07■□□□□ 0.32
PDCD2-211ENST00000544336 TRBV27A0A0K0K1C4 114 aa17.07■□□□□ 0.32
PDCD2-211ENST00000544336 CAMPP49913 170 aa17.07■□□□□ 0.32
PDCD2-211ENST00000544336 REG3GQ6UW15 175 aa17.07■□□□□ 0.32
PDCD2-211ENST00000544336 GAGE2BQ13066 116 aa17.06■□□□□ 0.32
PDCD2-211ENST00000544336 Q6ZRP5 223 aa17.06■□□□□ 0.32
PDCD2-211ENST00000544336 LINC01551Q86U37 167 aa17.06■□□□□ 0.32
PDCD2-211ENST00000544336 IGLV4-69A0A075B6H9 119 aa17.05■□□□□ 0.32
PDCD2-211ENST00000544336 MALP21145 153 aa17.05■□□□□ 0.32
PDCD2-211ENST00000544336 FCER1GP30273 86 aa17.05■□□□□ 0.32
PDCD2-211ENST00000544336 PTTG1IPP53801 180 aa17.05■□□□□ 0.32
PDCD2-211ENST00000544336 RNASE13Q5GAN3 156 aaKnown RBP17.05■□□□□ 0.32
PDCD2-211ENST00000544336 FAM210AQ96ND0 272 aa17.05■□□□□ 0.32
PDCD2-211ENST00000544336 EIF5A2Q9GZV4 153 aaKnown RBP17.05■□□□□ 0.32
PDCD2-211ENST00000544336 ISOC2Q96AB3 205 aa17.03■□□□□ 0.32
PDCD2-211ENST00000544336 LOC107984640A0A0U1RRK4 108 aa17.02■□□□□ 0.32
PDCD2-211ENST00000544336 COX7A2LO14548 114 aa17.02■□□□□ 0.32
PDCD2-211ENST00000544336 OSTCQ9NRP0 149 aa17.02■□□□□ 0.32
PDCD2-211ENST00000544336 ZNF727A8MUV8 499 aa17.01■□□□□ 0.31
PDCD2-211ENST00000544336 C1orf196B1AJZ1 125 aa17.01■□□□□ 0.31
PDCD2-211ENST00000544336 VCYO14598 125 aa17.01■□□□□ 0.31
PDCD2-211ENST00000544336 KRTAP10-8P60410 259 aa17.01■□□□□ 0.31
PDCD2-211ENST00000544336 SRSF9Q13242 221 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDCD2-211ENST00000544336 CAMK2N2Q96S95 79 aa17■□□□□ 0.31
PDCD2-211ENST00000544336 TRAV13-1A0A0B4J241 112 aa16.99■□□□□ 0.31
PDCD2-211ENST00000544336 RIGQ13278 110 aa16.99■□□□□ 0.31
PDCD2-211ENST00000544336 AKAP14Q86UN6 197 aa16.99■□□□□ 0.31
PDCD2-211ENST00000544336 UBE2D4Q9Y2X8 147 aa16.99■□□□□ 0.31
PDCD2-211ENST00000544336 A0A1W2PNN7 141 aa16.98■□□□□ 0.31
PDCD2-211ENST00000544336 NRACQ8N912 160 aa16.98■□□□□ 0.31
PDCD2-211ENST00000544336 NUP35Q8NFH5 326 aa16.98■□□□□ 0.31
PDCD2-211ENST00000544336 SUMO2P61956 95 aaKnown RBP16.97■□□□□ 0.31
PDCD2-211ENST00000544336 C5orf38Q86SI9 138 aa16.97■□□□□ 0.31
PDCD2-211ENST00000544336 V9GYV3 84 aa16.97■□□□□ 0.31
PDCD2-211ENST00000544336 SMAGPQ0VAQ4 97 aa16.96■□□□□ 0.31
PDCD2-211ENST00000544336 Q6ZUT4 128 aa16.96■□□□□ 0.31
PDCD2-211ENST00000544336 KIR2DL4Q99706 377 aa16.96■□□□□ 0.31
PDCD2-211ENST00000544336 SRP19P09132 144 aaKnown RBP16.95■□□□□ 0.3
PDCD2-211ENST00000544336 RPL18AQ02543 176 aaKnown RBP16.95■□□□□ 0.3
PDCD2-211ENST00000544336 CSDC2Q9Y534 153 aaKnown RBP16.95■□□□□ 0.3
PDCD2-211ENST00000544336 hCG_2014768A0A024R1R8 64 aa16.94■□□□□ 0.3
PDCD2-211ENST00000544336 APOMO95445 188 aa16.94■□□□□ 0.3
PDCD2-211ENST00000544336 PPP1R17O96001 155 aa16.94■□□□□ 0.3
PDCD2-211ENST00000544336 RNF213Q63HN8 5207 aa16.92■□□□□ 0.3
PDCD2-211ENST00000544336 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.92■□□□□ 0.3
PDCD2-211ENST00000544336 MRPL51Q4U2R6 128 aaKnown RBP16.92■□□□□ 0.3
PDCD2-211ENST00000544336 C9orf116Q5BN46 136 aaPredicted RBP16.92■□□□□ 0.3
PDCD2-211ENST00000544336 C2orf48Q96LS8 159 aa16.92■□□□□ 0.3
PDCD2-211ENST00000544336 OPRPNQ99935 248 aaPredicted RBP16.92■□□□□ 0.3
PDCD2-211ENST00000544336 SPAG11BQ08648 103 aa16.91■□□□□ 0.3
PDCD2-211ENST00000544336 NAT8BQ9UHF3 227 aa16.91■□□□□ 0.3
PDCD2-211ENST00000544336 PPP1R2P9O14990 202 aa16.9■□□□□ 0.3
PDCD2-211ENST00000544336 MT-ND6P03923 174 aa16.9■□□□□ 0.3
PDCD2-211ENST00000544336 PSORS1C2Q9UIG4 136 aa16.9■□□□□ 0.3
PDCD2-211ENST00000544336 TMEM18Q96B42 140 aa16.89■□□□□ 0.29
PDCD2-211ENST00000544336 FAM104BQ5XKR9 115 aa16.88■□□□□ 0.29
PDCD2-211ENST00000544336 PHF5AQ7RTV0 110 aaKnown RBP16.88■□□□□ 0.29
PDCD2-211ENST00000544336 RPL39P62891 51 aaKnown RBP16.87■□□□□ 0.29
PDCD2-211ENST00000544336 TMEM241Q24JQ0 296 aa16.87■□□□□ 0.29
PDCD2-211ENST00000544336 TIMM21Q9BVV7 248 aa16.87■□□□□ 0.29
PDCD2-211ENST00000544336 RPL23P62829 140 aaKnown RBP16.86■□□□□ 0.29
PDCD2-211ENST00000544336 ADIRFQ15847 76 aa16.86■□□□□ 0.29
PDCD2-211ENST00000544336 C1orf137Q5JT78 98 aa16.86■□□□□ 0.29
PDCD2-211ENST00000544336 CKS2P33552 79 aa16.84■□□□□ 0.29
PDCD2-211ENST00000544336 FAM74A3Q4VXF1 159 aa16.84■□□□□ 0.29
PDCD2-211ENST00000544336 ORAOV1Q8WV07 137 aa16.84■□□□□ 0.29
PDCD2-211ENST00000544336 OR10D4PQ8NGN7 298 aa16.83■□□□□ 0.28
PDCD2-211ENST00000544336 C20orf78Q9BR46 151 aa16.83■□□□□ 0.28
PDCD2-211ENST00000544336 RNF151Q2KHN1 245 aa16.82■□□□□ 0.28
PDCD2-211ENST00000544336 SMIM27A0A1W2PRY6 76 aa16.81■□□□□ 0.28
PDCD2-211ENST00000544336 LINC00862A6NCI5 91 aa16.81■□□□□ 0.28
PDCD2-211ENST00000544336 TNFRSF6BO95407 300 aa16.81■□□□□ 0.28
PDCD2-211ENST00000544336 FAM104AQ969W3 186 aa16.8■□□□□ 0.28
PDCD2-211ENST00000544336 TRBV24-1A0A075B6N3 115 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms