RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 EIF4EBP3O60516 100 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-208ENST00000544327 SBSPONQ8IVN8 264 aa12.67□□□□□ -0.38
SCARB1-208ENST00000544327 C1QTNF4Q9BXJ3 329 aa12.67□□□□□ -0.38
SCARB1-208ENST00000544327 LOC107984156A0A0G2JMH3 177 aa12.66□□□□□ -0.38
SCARB1-208ENST00000544327 IGHV3-33P01772 117 aa12.66□□□□□ -0.38
SCARB1-208ENST00000544327 ARL17AQ8IVW1 177 aa12.66□□□□□ -0.38
SCARB1-208ENST00000544327 PDZD2O15018 2839 aa12.65□□□□□ -0.38
SCARB1-208ENST00000544327 TIMM17BO60830 172 aa12.65□□□□□ -0.38
SCARB1-208ENST00000544327 SPINK8P0C7L1 97 aa12.65□□□□□ -0.38
SCARB1-208ENST00000544327 PSMB2P49721 201 aa12.65□□□□□ -0.38
SCARB1-208ENST00000544327 CSNK1G2-AS1Q8NCQ2 148 aa12.65□□□□□ -0.38
SCARB1-208ENST00000544327 ATP6V0E2Q8NHE4 81 aa12.65□□□□□ -0.38
SCARB1-208ENST00000544327 OVOL2Q9BRP0 275 aa12.65□□□□□ -0.38
SCARB1-208ENST00000544327 J3QR89 54 aa12.65□□□□□ -0.39
SCARB1-208ENST00000544327 SMAGPQ0VAQ4 97 aa12.65□□□□□ -0.39
SCARB1-208ENST00000544327 ETDBQ3ZM63 59 aa12.65□□□□□ -0.39
SCARB1-208ENST00000544327 DGAT2L7PQ6IED9 249 aa12.65□□□□□ -0.39
SCARB1-208ENST00000544327 NOP10Q9NPE3 64 aaKnown RBP12.65□□□□□ -0.39
SCARB1-208ENST00000544327 NTM-AS1Q6ZSK4 140 aa12.64□□□□□ -0.39
SCARB1-208ENST00000544327 SH2D6Q7Z4S9 175 aa12.64□□□□□ -0.39
SCARB1-208ENST00000544327 GTSF1LQ9H1H1 148 aa12.64□□□□□ -0.39
SCARB1-208ENST00000544327 NBPF19A0A087WUL8 3843 aa12.63□□□□□ -0.39
SCARB1-208ENST00000544327 SMCPP49901 116 aaPredicted RBP12.63□□□□□ -0.39
SCARB1-208ENST00000544327 HERVK_113P63121 156 aa12.63□□□□□ -0.39
SCARB1-208ENST00000544327 RNF183Q96D59 192 aa12.63□□□□□ -0.39
SCARB1-208ENST00000544327 CDKN2A-AS1Q9UH64 79 aa12.63□□□□□ -0.39
SCARB1-208ENST00000544327 TCL1BO95988 128 aa12.62□□□□□ -0.39
SCARB1-208ENST00000544327 MIAQ16674 131 aa12.62□□□□□ -0.39
SCARB1-208ENST00000544327 WFDC10AQ9H1F0 79 aa12.62□□□□□ -0.39
SCARB1-208ENST00000544327 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
SCARB1-208ENST00000544327 FLNAP21333 2647 aaKnown RBP12.62□□□□□ -0.39
SCARB1-208ENST00000544327 TLN2Q9Y4G6 2542 aa12.62□□□□□ -0.39
SCARB1-208ENST00000544327 IGLV5-39A0A0G2JS06 123 aa12.62□□□□□ -0.39
SCARB1-208ENST00000544327 NDUFA1O15239 70 aa12.62□□□□□ -0.39
SCARB1-208ENST00000544327 LINC00694P0DN24 101 aa12.62□□□□□ -0.39
SCARB1-208ENST00000544327 MTURNQ8N3F0 131 aa12.62□□□□□ -0.39
SCARB1-208ENST00000544327 SONP18583 2426 aaKnown RBP12.61□□□□□ -0.39
SCARB1-208ENST00000544327 RPL35AP18077 110 aaKnown RBP12.61□□□□□ -0.39
SCARB1-208ENST00000544327 LINC00242Q5T6M2 205 aa12.61□□□□□ -0.39
SCARB1-208ENST00000544327 TRBV6-4A0A1B0GX49 114 aa12.6□□□□□ -0.39
SCARB1-208ENST00000544327 ADAMTSL4-AS1Q5T5F5 129 aa12.6□□□□□ -0.39
SCARB1-208ENST00000544327 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
SCARB1-208ENST00000544327 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-208ENST00000544327 TMEM101Q96IK0 257 aa12.6□□□□□ -0.39
SCARB1-208ENST00000544327 CHD6Q8TD26 2715 aa12.6□□□□□ -0.39
SCARB1-208ENST00000544327 GAGE12JA6NER3 117 aa12.6□□□□□ -0.39
SCARB1-208ENST00000544327 COX6A2Q02221 97 aa12.6□□□□□ -0.39
SCARB1-208ENST00000544327 GAGE4Q13068 117 aa12.6□□□□□ -0.39
SCARB1-208ENST00000544327 GAGE5Q13069 117 aa12.6□□□□□ -0.39
SCARB1-208ENST00000544327 A8MZ25 164 aa12.59□□□□□ -0.39
SCARB1-208ENST00000544327 H7C423 109 aa12.59□□□□□ -0.39
SCARB1-208ENST00000544327 IFITM1P13164 125 aa12.59□□□□□ -0.39
SCARB1-208ENST00000544327 CDC42SE2Q9NRR3 84 aa12.59□□□□□ -0.39
SCARB1-208ENST00000544327 TENM4Q6N022 2769 aa12.59□□□□□ -0.39
SCARB1-208ENST00000544327 M0QXV9 152 aa12.58□□□□□ -0.4
SCARB1-208ENST00000544327 GAGE7O76087 117 aa12.58□□□□□ -0.4
SCARB1-208ENST00000544327 GAGE12FP0CL80 117 aa12.58□□□□□ -0.4
SCARB1-208ENST00000544327 GAGE12GP0CL81 117 aa12.58□□□□□ -0.4
SCARB1-208ENST00000544327 GAGE12IP0CL82 117 aa12.58□□□□□ -0.4
SCARB1-208ENST00000544327 SCGB1C2P0DMR2 95 aa12.58□□□□□ -0.4
SCARB1-208ENST00000544327 TMEM243Q9BU79 118 aa12.58□□□□□ -0.4
SCARB1-208ENST00000544327 TRGV2A0A075B6R0 118 aa12.57□□□□□ -0.4
SCARB1-208ENST00000544327 WNK1Q9H4A3 2382 aa12.56□□□□□ -0.4
SCARB1-208ENST00000544327 TRBV30A0A0K0K1B3 111 aa12.55□□□□□ -0.4
SCARB1-208ENST00000544327 KRTAP10-3P60369 221 aa12.55□□□□□ -0.4
SCARB1-208ENST00000544327 FOXI1Q12951 378 aa12.55□□□□□ -0.4
SCARB1-208ENST00000544327 SMIM1B2RUZ4 78 aa12.55□□□□□ -0.4
SCARB1-208ENST00000544327 PRSS2P07478 247 aa12.55□□□□□ -0.4
SCARB1-208ENST00000544327 LINC00482Q8N8I6 264 aa12.55□□□□□ -0.4
SCARB1-208ENST00000544327 SPATA25Q9BR10 227 aa12.55□□□□□ -0.4
SCARB1-208ENST00000544327 F5H768 121 aa12.53□□□□□ -0.4
SCARB1-208ENST00000544327 FHL2Q14192 279 aa12.53□□□□□ -0.4
SCARB1-208ENST00000544327 TEN1Q86WV5 123 aa12.53□□□□□ -0.4
SCARB1-208ENST00000544327 GAGE12HA6NDE8 117 aa12.53□□□□□ -0.4
SCARB1-208ENST00000544327 UBE2L6O14933 153 aa12.53□□□□□ -0.4
SCARB1-208ENST00000544327 INSL3P51460 131 aa12.53□□□□□ -0.4
SCARB1-208ENST00000544327 CIRBPQ14011 172 aaKnown RBP12.53□□□□□ -0.4
SCARB1-208ENST00000544327 LINC01600Q96MT4 127 aa12.53□□□□□ -0.4
SCARB1-208ENST00000544327 CCDC168Q8NDH2 2452 aa12.52□□□□□ -0.4
SCARB1-208ENST00000544327 TRGV4A0A0C4DH28 118 aa12.52□□□□□ -0.41
SCARB1-208ENST00000544327 LINC00612Q8N6U2 182 aa12.52□□□□□ -0.41
SCARB1-208ENST00000544327 PPDPFLQ8WWR9 84 aa12.52□□□□□ -0.41
SCARB1-208ENST00000544327 TRAV13-1A0A0B4J241 112 aa12.51□□□□□ -0.41
SCARB1-208ENST00000544327 LOC100131303A0A0U1RQF7 123 aa12.51□□□□□ -0.41
SCARB1-208ENST00000544327 Q1RN00 199 aa12.51□□□□□ -0.41
SCARB1-208ENST00000544327 KIR2DL5BQ8NHK3 375 aa12.51□□□□□ -0.41
SCARB1-208ENST00000544327 H7C2G1 150 aa12.51□□□□□ -0.41
SCARB1-208ENST00000544327 PF4P02776 101 aa12.51□□□□□ -0.41
SCARB1-208ENST00000544327 ATXN8Q156A1 80 aa12.51□□□□□ -0.41
SCARB1-208ENST00000544327 SMR3AQ99954 134 aa12.51□□□□□ -0.41
SCARB1-208ENST00000544327 PPDPFQ9H3Y8 114 aa12.51□□□□□ -0.41
SCARB1-208ENST00000544327 Q9H8V8 135 aa12.51□□□□□ -0.41
SCARB1-208ENST00000544327 CUBNO60494 3623 aa12.5□□□□□ -0.41
SCARB1-208ENST00000544327 TRIAP1O43715 76 aa12.5□□□□□ -0.41
SCARB1-208ENST00000544327 ZNF625Q96I27 306 aaPredicted RBP12.5□□□□□ -0.41
SCARB1-208ENST00000544327 KMT2BQ9UMN6 2715 aaPredicted RBP12.49□□□□□ -0.41
SCARB1-208ENST00000544327 ICOSQ9Y6W8 199 aa12.49□□□□□ -0.41
SCARB1-208ENST00000544327 LY6G6DO95868 133 aa12.48□□□□□ -0.41
SCARB1-208ENST00000544327 HERV-K104P63124 156 aa12.48□□□□□ -0.41
SCARB1-208ENST00000544327 COPS9Q8WXC6 57 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms