RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 A8MWV9 139 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 TEN1Q86WV5 123 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 C4orf3Q8WVX3 66 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 C9JAW5 83 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 SNCGO76070 127 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 GAGE7O76087 117 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 GAGE12FP0CL80 117 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 GAGE12GP0CL81 117 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 GAGE12IP0CL82 117 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 GAGE4Q13068 117 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 OXLD1Q5BKU9 147 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 STHQ8IWL8 128 aa11.44□□□□□ -0.58
SNRNP70-203ENST00000544278 POM121L12Q8N7R1 296 aa11.44□□□□□ -0.58
SNRNP70-203ENST00000544278 HIVEP1P15822 2718 aa11.44□□□□□ -0.58
SNRNP70-203ENST00000544278 J3QQQ9 107 aa11.44□□□□□ -0.58
SNRNP70-203ENST00000544278 Q6ZTI0 123 aa11.44□□□□□ -0.58
SNRNP70-203ENST00000544278 LGALS3P17931 250 aaKnown RBP11.43□□□□□ -0.58
SNRNP70-203ENST00000544278 DAND5Q8N907 189 aa11.43□□□□□ -0.58
SNRNP70-203ENST00000544278 ZNF625Q96I27 306 aaPredicted RBP11.43□□□□□ -0.58
SNRNP70-203ENST00000544278 LINC00467Q9BRT7 94 aa11.43□□□□□ -0.58
SNRNP70-203ENST00000544278 IGKV3OR2-268A0A0C4DH90 116 aa11.43□□□□□ -0.58
SNRNP70-203ENST00000544278 A0A0J9YY99 117 aa11.43□□□□□ -0.58
SNRNP70-203ENST00000544278 NDUFV3P56181 108 aaKnown RBP11.43□□□□□ -0.58
SNRNP70-203ENST00000544278 NSD1Q96L73 2696 aaPredicted RBP11.42□□□□□ -0.58
SNRNP70-203ENST00000544278 M0R2P5 195 aa11.42□□□□□ -0.58
SNRNP70-203ENST00000544278 PF4P02776 101 aa11.42□□□□□ -0.58
SNRNP70-203ENST00000544278 PRSS2P07478 247 aa11.42□□□□□ -0.58
SNRNP70-203ENST00000544278 ZNF22P17026 224 aaPredicted RBP11.42□□□□□ -0.58
SNRNP70-203ENST00000544278 HERVK_113P61574 105 aa11.41□□□□□ -0.58
SNRNP70-203ENST00000544278 ODF3Q96PU9 254 aa11.41□□□□□ -0.58
SNRNP70-203ENST00000544278 C1orf158Q8N1D5 194 aa11.41□□□□□ -0.58
SNRNP70-203ENST00000544278 LINC01006Q8NI28 216 aa11.41□□□□□ -0.58
SNRNP70-203ENST00000544278 FAM104AQ969W3 186 aa11.41□□□□□ -0.58
SNRNP70-203ENST00000544278 TRBV6-5A0A0K0K1A5 114 aa11.41□□□□□ -0.58
SNRNP70-203ENST00000544278 RNF152Q8N8N0 203 aa11.41□□□□□ -0.58
SNRNP70-203ENST00000544278 TIMM17AQ99595 171 aa11.41□□□□□ -0.58
SNRNP70-203ENST00000544278 LOC100131303A0A0U1RQF7 123 aa11.4□□□□□ -0.58
SNRNP70-203ENST00000544278 ZNF415Q09FC8 603 aa11.4□□□□□ -0.58
SNRNP70-203ENST00000544278 NOP10Q9NPE3 64 aaKnown RBP11.4□□□□□ -0.58
SNRNP70-203ENST00000544278 C11orf72Q8NBR9 251 aa11.4□□□□□ -0.58
SNRNP70-203ENST00000544278 NTN5Q8WTR8 489 aaPredicted RBP11.4□□□□□ -0.58
SNRNP70-203ENST00000544278 INSP01308 110 aa11.39□□□□□ -0.59
SNRNP70-203ENST00000544278 TAL2Q16559 108 aa11.39□□□□□ -0.59
SNRNP70-203ENST00000544278 TMEM141Q96I45 108 aa11.39□□□□□ -0.59
SNRNP70-203ENST00000544278 LINC00694P0DN24 101 aa11.39□□□□□ -0.59
SNRNP70-203ENST00000544278 MEIG1Q5JSS6 88 aa11.38□□□□□ -0.59
SNRNP70-203ENST00000544278 SPATA3Q8NHX4 192 aa11.38□□□□□ -0.59
SNRNP70-203ENST00000544278 RHODO00212 210 aa11.38□□□□□ -0.59
SNRNP70-203ENST00000544278 Q1RN00 199 aa11.38□□□□□ -0.59
SNRNP70-203ENST00000544278 Q8N2B8 174 aa11.38□□□□□ -0.59
SNRNP70-203ENST00000544278 SLC25A20O43772 301 aa11.37□□□□□ -0.59
SNRNP70-203ENST00000544278 IFITM1P13164 125 aa11.37□□□□□ -0.59
SNRNP70-203ENST00000544278 KRTAP1-1Q07627 177 aa11.37□□□□□ -0.59
SNRNP70-203ENST00000544278 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
SNRNP70-203ENST00000544278 TEX49A0A1B0GTD5 131 aa11.37□□□□□ -0.59
SNRNP70-203ENST00000544278 AMELXQ99217 191 aa11.37□□□□□ -0.59
SNRNP70-203ENST00000544278 TRAV13-1A0A0B4J241 112 aa11.37□□□□□ -0.59
SNRNP70-203ENST00000544278 M0QXV9 152 aa11.37□□□□□ -0.59
SNRNP70-203ENST00000544278 PPDPFQ9H3Y8 114 aa11.37□□□□□ -0.59
SNRNP70-203ENST00000544278 EIF4EBP3O60516 100 aaPredicted RBP11.36□□□□□ -0.59
SNRNP70-203ENST00000544278 DGAT2L7PQ6IED9 249 aa11.36□□□□□ -0.59
SNRNP70-203ENST00000544278 ATP6V0E2Q8NHE4 81 aa11.36□□□□□ -0.59
SNRNP70-203ENST00000544278 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.36□□□□□ -0.59
SNRNP70-203ENST00000544278 CHCHD7Q9BUK0 85 aa11.36□□□□□ -0.59
SNRNP70-203ENST00000544278 TMEM223A0PJW6 202 aa11.35□□□□□ -0.59
SNRNP70-203ENST00000544278 CFC1BP0CG36 223 aa11.35□□□□□ -0.59
SNRNP70-203ENST00000544278 CFC1P0CG37 223 aa11.35□□□□□ -0.59
SNRNP70-203ENST00000544278 IGHV3-30-3P0DP02 117 aa11.35□□□□□ -0.59
SNRNP70-203ENST00000544278 NDUFA11Q86Y39 141 aa11.35□□□□□ -0.59
SNRNP70-203ENST00000544278 MUSTN1Q8IVN3 82 aa11.35□□□□□ -0.59
SNRNP70-203ENST00000544278 C15orf53Q8NAA6 179 aa11.35□□□□□ -0.59
SNRNP70-203ENST00000544278 CHCHD5Q9BSY4 110 aa11.35□□□□□ -0.59
SNRNP70-203ENST00000544278 RHOHQ15669 191 aa11.35□□□□□ -0.59
SNRNP70-203ENST00000544278 LRRC75A-AS1Q8N1F1 130 aa11.34□□□□□ -0.59
SNRNP70-203ENST00000544278 F8P00451 2351 aa11.34□□□□□ -0.59
SNRNP70-203ENST00000544278 IGHV3-30P01768 117 aa11.34□□□□□ -0.59
SNRNP70-203ENST00000544278 IGHV3-30-5P0DP03 117 aa11.34□□□□□ -0.59
SNRNP70-203ENST00000544278 STAB1Q9NY15 2570 aa11.34□□□□□ -0.59
SNRNP70-203ENST00000544278 COX6A2Q02221 97 aa11.33□□□□□ -0.59
SNRNP70-203ENST00000544278 ADAMTSL4-AS1Q5T5F5 129 aa11.33□□□□□ -0.59
SNRNP70-203ENST00000544278 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.59
SNRNP70-203ENST00000544278 KMT2BQ9UMN6 2715 aaPredicted RBP11.33□□□□□ -0.6
SNRNP70-203ENST00000544278 TIMM21Q9BVV7 248 aa11.33□□□□□ -0.6
SNRNP70-203ENST00000544278 TMEM262E9PQX1 116 aa11.33□□□□□ -0.6
SNRNP70-203ENST00000544278 DEFB4AO15263 64 aa11.32□□□□□ -0.6
SNRNP70-203ENST00000544278 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
SNRNP70-203ENST00000544278 A0A096LPF7 62 aa11.32□□□□□ -0.6
SNRNP70-203ENST00000544278 UBE2D3P61077 147 aa11.32□□□□□ -0.6
SNRNP70-203ENST00000544278 UBE2D2P62837 147 aa11.32□□□□□ -0.6
SNRNP70-203ENST00000544278 UBE2D4Q9Y2X8 147 aa11.32□□□□□ -0.6
SNRNP70-203ENST00000544278 UBE2D1P51668 147 aa11.31□□□□□ -0.6
SNRNP70-203ENST00000544278 MRPL23Q16540 153 aaKnown RBP11.31□□□□□ -0.6
SNRNP70-203ENST00000544278 SLC25A29Q8N8R3 303 aa11.31□□□□□ -0.6
SNRNP70-203ENST00000544278 NOTCH1P46531 2555 aa11.31□□□□□ -0.6
SNRNP70-203ENST00000544278 DEFB130BP0DP73 79 aa11.31□□□□□ -0.6
SNRNP70-203ENST00000544278 DEFB130AP0DP74 79 aa11.31□□□□□ -0.6
SNRNP70-203ENST00000544278 PAPPA-AS1Q5QFB9 102 aa11.31□□□□□ -0.6
SNRNP70-203ENST00000544278 A0A0J9YXY3 114 aa11.3□□□□□ -0.6
SNRNP70-203ENST00000544278 GIG44P09565 113 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms