RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 HILS1P60008 231 aa11.47□□□□□ -0.57
CHD4-210ENST00000544040 M0R2N4 97 aa11.47□□□□□ -0.57
CHD4-210ENST00000544040 PRM2P04554 102 aa11.46□□□□□ -0.57
CHD4-210ENST00000544040 U3KQK5 164 aa11.46□□□□□ -0.57
CHD4-210ENST00000544040 TNFRSF13BO14836 293 aaPredicted RBP11.46□□□□□ -0.58
CHD4-210ENST00000544040 NDUFC1O43677 76 aa11.46□□□□□ -0.58
CHD4-210ENST00000544040 Q6ZS46 218 aa11.46□□□□□ -0.58
CHD4-210ENST00000544040 XGP55808 180 aa11.46□□□□□ -0.58
CHD4-210ENST00000544040 CELA1Q9UNI1 258 aa11.46□□□□□ -0.58
CHD4-210ENST00000544040 ANAPC1Q9H1A4 1944 aa11.45□□□□□ -0.58
CHD4-210ENST00000544040 COX7CP15954 63 aa11.45□□□□□ -0.58
CHD4-210ENST00000544040 PCNX1Q96RV3 2341 aa11.45□□□□□ -0.58
CHD4-210ENST00000544040 C2orf91Q6ZV80 131 aa11.45□□□□□ -0.58
CHD4-210ENST00000544040 TNCP24821 2201 aa11.45□□□□□ -0.58
CHD4-210ENST00000544040 UBE2D1P51668 147 aa11.44□□□□□ -0.58
CHD4-210ENST00000544040 TSHBP01222 138 aa11.44□□□□□ -0.58
CHD4-210ENST00000544040 RETNQ9HD89 108 aa11.44□□□□□ -0.58
CHD4-210ENST00000544040 NANOS2P60321 138 aaKnown RBP11.44□□□□□ -0.58
CHD4-210ENST00000544040 Q6YL49 198 aa11.44□□□□□ -0.58
CHD4-210ENST00000544040 MGAMO43451 1857 aa11.44□□□□□ -0.58
CHD4-210ENST00000544040 SMIM9A6NGZ8 99 aa11.43□□□□□ -0.58
CHD4-210ENST00000544040 LMO4P61968 165 aa11.43□□□□□ -0.58
CHD4-210ENST00000544040 C19orf84I3L1E1 186 aa11.43□□□□□ -0.58
CHD4-210ENST00000544040 SOSTDC1Q6X4U4 206 aa11.43□□□□□ -0.58
CHD4-210ENST00000544040 UBE2D4Q9Y2X8 147 aa11.43□□□□□ -0.58
CHD4-210ENST00000544040 LST1O00453 97 aa11.43□□□□□ -0.58
CHD4-210ENST00000544040 Q6Q795 121 aa11.42□□□□□ -0.58
CHD4-210ENST00000544040 IL17DQ8TAD2 202 aa11.42□□□□□ -0.58
CHD4-210ENST00000544040 C7orf33Q8WU49 177 aa11.42□□□□□ -0.58
CHD4-210ENST00000544040 TRBV6-4A0A1B0GX49 114 aa11.41□□□□□ -0.58
CHD4-210ENST00000544040 M0R378 163 aa11.41□□□□□ -0.58
CHD4-210ENST00000544040 GAS8-AS1O95177 125 aa11.41□□□□□ -0.58
CHD4-210ENST00000544040 WFDC10AQ9H1F0 79 aa11.41□□□□□ -0.58
CHD4-210ENST00000544040 NBASA2RRP1 2371 aa11.41□□□□□ -0.58
CHD4-210ENST00000544040 NRACQ8N912 160 aa11.4□□□□□ -0.58
CHD4-210ENST00000544040 DHRS4-AS1Q9P1J3 65 aa11.4□□□□□ -0.58
CHD4-210ENST00000544040 INAFM1C9JVW0 142 aa11.4□□□□□ -0.58
CHD4-210ENST00000544040 UBE2D3P61077 147 aa11.4□□□□□ -0.58
CHD4-210ENST00000544040 CLUHP3Q96NS8 147 aa11.4□□□□□ -0.58
CHD4-210ENST00000544040 M0QXV9 152 aa11.4□□□□□ -0.59
CHD4-210ENST00000544040 PRR9Q5T870 116 aa11.4□□□□□ -0.59
CHD4-210ENST00000544040 Q8NA96 180 aa11.4□□□□□ -0.59
CHD4-210ENST00000544040 CACNA1HO95180 2353 aa11.4□□□□□ -0.59
CHD4-210ENST00000544040 MED13LQ71F56 2210 aa11.39□□□□□ -0.59
CHD4-210ENST00000544040 IGLV2-11P01706 119 aa11.39□□□□□ -0.59
CHD4-210ENST00000544040 IGF2-ASQ6U949 168 aa11.39□□□□□ -0.59
CHD4-210ENST00000544040 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
CHD4-210ENST00000544040 LINC00959A0A1B0GUT2 108 aa11.39□□□□□ -0.59
CHD4-210ENST00000544040 MIFP14174 115 aa11.39□□□□□ -0.59
CHD4-210ENST00000544040 CD164L2Q6UWJ8 174 aa11.38□□□□□ -0.59
CHD4-210ENST00000544040 RNASE3P12724 160 aaKnown RBP11.38□□□□□ -0.59
CHD4-210ENST00000544040 EBI3Q14213 229 aa11.38□□□□□ -0.59
CHD4-210ENST00000544040 YPEL4Q96NS1 127 aa11.38□□□□□ -0.59
CHD4-210ENST00000544040 RETNLBQ9BQ08 111 aa11.38□□□□□ -0.59
CHD4-210ENST00000544040 EIF4EBP1Q13541 118 aaPredicted RBP11.38□□□□□ -0.59
CHD4-210ENST00000544040 C18orf65Q6ZTR6 163 aa11.37□□□□□ -0.59
CHD4-210ENST00000544040 GPR179Q6PRD1 2367 aa11.37□□□□□ -0.59
CHD4-210ENST00000544040 PLAC8L1A1L4L8 177 aa11.37□□□□□ -0.59
CHD4-210ENST00000544040 PYGO1Q9Y3Y4 419 aa11.37□□□□□ -0.59
CHD4-210ENST00000544040 PLXNB3Q9ULL4 1909 aa11.36□□□□□ -0.59
CHD4-210ENST00000544040 NOTCH4Q99466 2003 aa11.36□□□□□ -0.59
CHD4-210ENST00000544040 ZNF73O43830 326 aaPredicted RBP11.36□□□□□ -0.59
CHD4-210ENST00000544040 C11orf21Q9P2W6 132 aa11.36□□□□□ -0.59
CHD4-210ENST00000544040 LINC00574Q9H8X3 128 aa11.36□□□□□ -0.59
CHD4-210ENST00000544040 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
CHD4-210ENST00000544040 A0A087WVE0 104 aa11.35□□□□□ -0.59
CHD4-210ENST00000544040 Q6ZVQ6 151 aa11.35□□□□□ -0.59
CHD4-210ENST00000544040 ZNF706Q9Y5V0 76 aaPredicted RBP11.35□□□□□ -0.59
CHD4-210ENST00000544040 IGLV4-69A0A075B6H9 119 aa11.35□□□□□ -0.59
CHD4-210ENST00000544040 PMAIP1Q13794 54 aa11.35□□□□□ -0.59
CHD4-210ENST00000544040 Q6ZSV7 163 aa11.35□□□□□ -0.59
CHD4-210ENST00000544040 KIF26AQ9ULI4 1882 aaPredicted RBP11.34□□□□□ -0.59
CHD4-210ENST00000544040 KPRPQ5T749 579 aaPredicted RBP11.34□□□□□ -0.59
CHD4-210ENST00000544040 CRIP3Q6Q6R5 217 aa11.34□□□□□ -0.59
CHD4-210ENST00000544040 NCOA6Q14686 2063 aaPredicted RBP11.34□□□□□ -0.59
CHD4-210ENST00000544040 ESRGQ1W209 222 aa11.34□□□□□ -0.59
CHD4-210ENST00000544040 RIF1Q5UIP0 2472 aaKnown RBP11.34□□□□□ -0.59
CHD4-210ENST00000544040 TANC1Q9C0D5 1861 aa11.34□□□□□ -0.59
CHD4-210ENST00000544040 Q6JHZ5 121 aa11.34□□□□□ -0.59
CHD4-210ENST00000544040 NUP210Q8TEM1 1887 aaPredicted RBP11.33□□□□□ -0.6
CHD4-210ENST00000544040 CREBBPQ92793 2442 aa11.33□□□□□ -0.6
CHD4-210ENST00000544040 ZNF106Q9H2Y7 1883 aaKnown RBP11.33□□□□□ -0.6
CHD4-210ENST00000544040 COL4A3Q01955 1670 aa11.33□□□□□ -0.6
CHD4-210ENST00000544040 UBE2D2P62837 147 aa11.33□□□□□ -0.6
CHD4-210ENST00000544040 FBXL19-AS1Q494R0 122 aa11.32□□□□□ -0.6
CHD4-210ENST00000544040 LOC107984640A0A0U1RRK4 108 aa11.32□□□□□ -0.6
CHD4-210ENST00000544040 LINC00208Q96KT6 92 aa11.32□□□□□ -0.6
CHD4-210ENST00000544040 SMIM26A0A096LP01 95 aa11.31□□□□□ -0.6
CHD4-210ENST00000544040 TRAV10A0A0B4J240 114 aa11.31□□□□□ -0.6
CHD4-210ENST00000544040 X6R8D5 127 aa11.31□□□□□ -0.6
CHD4-210ENST00000544040 C9orf116Q5BN46 136 aaPredicted RBP11.3□□□□□ -0.6
CHD4-210ENST00000544040 PSPHP1O15172 72 aa11.3□□□□□ -0.6
CHD4-210ENST00000544040 CRIP2P52943 208 aaPredicted RBP11.3□□□□□ -0.6
CHD4-210ENST00000544040 C10orf25Q5T742 122 aa11.29□□□□□ -0.6
CHD4-210ENST00000544040 LELP1Q5T871 98 aa11.29□□□□□ -0.6
CHD4-210ENST00000544040 TANC2Q9HCD6 1990 aa11.29□□□□□ -0.6
CHD4-210ENST00000544040 PRR3P79522 188 aaKnown RBP11.29□□□□□ -0.6
CHD4-210ENST00000544040 ADAMTS9Q9P2N4 1935 aa11.29□□□□□ -0.6
CHD4-210ENST00000544040 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.29□□□□□ -0.6
CHD4-210ENST00000544040 CYSRT1A8MQ03 144 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms