RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ERASQ7Z444 233 aa8.1□□□□□ -1.11
DDB1-223ENST00000543658 TMEM141Q96I45 108 aa8.1□□□□□ -1.11
DDB1-223ENST00000543658 TIMM17AQ99595 171 aa8.1□□□□□ -1.11
DDB1-223ENST00000543658 KLK12Q9UKR0 248 aa8.1□□□□□ -1.11
DDB1-223ENST00000543658 PYGO1Q9Y3Y4 419 aa8.1□□□□□ -1.11
DDB1-223ENST00000543658 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
DDB1-223ENST00000543658 IGLV4-60A0A075B6I1 120 aa8.09□□□□□ -1.11
DDB1-223ENST00000543658 NPSP0C0P6 89 aa8.09□□□□□ -1.11
DDB1-223ENST00000543658 LINC00310P59036 64 aa8.09□□□□□ -1.11
DDB1-223ENST00000543658 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
DDB1-223ENST00000543658 PDZD11Q5EBL8 140 aa8.09□□□□□ -1.11
DDB1-223ENST00000543658 TEX43Q6ZNM6 134 aa8.09□□□□□ -1.11
DDB1-223ENST00000543658 C2orf88Q9BSF0 95 aa8.09□□□□□ -1.11
DDB1-223ENST00000543658 HSPB8Q9UJY1 196 aa8.09□□□□□ -1.11
DDB1-223ENST00000543658 TENM2Q9NT68 2774 aa8.09□□□□□ -1.11
DDB1-223ENST00000543658 A0A096LNJ9 63 aa8.08□□□□□ -1.12
DDB1-223ENST00000543658 IGKV3OR2-268A0A0C4DH90 116 aa8.08□□□□□ -1.12
DDB1-223ENST00000543658 NUPR1O60356 82 aa8.08□□□□□ -1.12
DDB1-223ENST00000543658 FABP4P15090 132 aa8.08□□□□□ -1.12
DDB1-223ENST00000543658 MRPS36P82909 103 aaKnown RBP8.08□□□□□ -1.12
DDB1-223ENST00000543658 CLPSL2Q6UWE3 100 aa8.08□□□□□ -1.12
DDB1-223ENST00000543658 Q6ZUT4 128 aa8.08□□□□□ -1.12
DDB1-223ENST00000543658 ZNF664Q8N3J9 261 aa8.08□□□□□ -1.12
DDB1-223ENST00000543658 Q8N3U1 123 aa8.08□□□□□ -1.12
DDB1-223ENST00000543658 UBE2WQ96B02 151 aa8.08□□□□□ -1.12
DDB1-223ENST00000543658 PLECQ15149 4684 aaKnown RBP8.08□□□□□ -1.12
DDB1-223ENST00000543658 IGLV4-3A0A075B6K6 122 aa8.07□□□□□ -1.12
DDB1-223ENST00000543658 NBDYA0A0U1RRE5 68 aa8.07□□□□□ -1.12
DDB1-223ENST00000543658 REG3AQ06141 175 aa8.07□□□□□ -1.12
DDB1-223ENST00000543658 RNASE13Q5GAN3 156 aaKnown RBP8.07□□□□□ -1.12
DDB1-223ENST00000543658 LINC00269Q8N2A0 174 aa8.07□□□□□ -1.12
DDB1-223ENST00000543658 VCX2Q9H322 139 aa8.07□□□□□ -1.12
DDB1-223ENST00000543658 CDC42SE2Q9NRR3 84 aa8.07□□□□□ -1.12
DDB1-223ENST00000543658 TRAV8-3A0A0A6YYJ7 113 aa8.06□□□□□ -1.12
DDB1-223ENST00000543658 IGIPA6NJ69 53 aa8.06□□□□□ -1.12
DDB1-223ENST00000543658 IFITM10A6NMD0 228 aa8.06□□□□□ -1.12
DDB1-223ENST00000543658 SNRPEP62304 92 aaKnown RBP8.06□□□□□ -1.12
DDB1-223ENST00000543658 IFI27L1Q96BM0 104 aa8.06□□□□□ -1.12
DDB1-223ENST00000543658 RMI2Q96E14 147 aa8.06□□□□□ -1.12
DDB1-223ENST00000543658 PACRGQ96M98 296 aaPredicted RBP8.06□□□□□ -1.12
DDB1-223ENST00000543658 LCE6AA0A183 80 aa8.05□□□□□ -1.12
DDB1-223ENST00000543658 H0Y8G0 127 aa8.05□□□□□ -1.12
DDB1-223ENST00000543658 M0R2N4 97 aa8.05□□□□□ -1.12
DDB1-223ENST00000543658 PRSS1P07477 247 aa8.05□□□□□ -1.12
DDB1-223ENST00000543658 SS18Q15532 418 aa8.05□□□□□ -1.12
DDB1-223ENST00000543658 OPRPNQ99935 248 aaPredicted RBP8.05□□□□□ -1.12
DDB1-223ENST00000543658 MAP1LC3CQ9BXW4 147 aa8.05□□□□□ -1.12
DDB1-223ENST00000543658 Q9HAA7 133 aa8.05□□□□□ -1.12
DDB1-223ENST00000543658 TRAV13-1A0A0B4J241 112 aa8.04□□□□□ -1.12
DDB1-223ENST00000543658 IBA57-AS1B1ANH7 110 aa8.04□□□□□ -1.12
DDB1-223ENST00000543658 MIAQ16674 131 aa8.04□□□□□ -1.12
DDB1-223ENST00000543658 HIST3H2BBQ8N257 126 aa8.04□□□□□ -1.12
DDB1-223ENST00000543658 BAALCQ8WXS3 180 aa8.04□□□□□ -1.12
DDB1-223ENST00000543658 C1orf43Q9BWL3 253 aa8.04□□□□□ -1.12
DDB1-223ENST00000543658 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
DDB1-223ENST00000543658 TRAV8-4A0A0B4J246 113 aa8.03□□□□□ -1.12
DDB1-223ENST00000543658 PMVKQ15126 192 aa8.03□□□□□ -1.12
DDB1-223ENST00000543658 NFE4Q86UQ8 179 aa8.03□□□□□ -1.12
DDB1-223ENST00000543658 PRR34Q9NV39 138 aa8.03□□□□□ -1.12
DDB1-223ENST00000543658 ALMS1Q8TCU4 4167 aa8.03□□□□□ -1.12
DDB1-223ENST00000543658 C5orf52A6NGY3 159 aa8.02□□□□□ -1.13
DDB1-223ENST00000543658 CCL25O15444 150 aa8.02□□□□□ -1.13
DDB1-223ENST00000543658 PSCAO43653 123 aa8.02□□□□□ -1.13
DDB1-223ENST00000543658 SEC11AP67812 179 aa8.02□□□□□ -1.13
DDB1-223ENST00000543658 AMELXQ99217 191 aa8.02□□□□□ -1.13
DDB1-223ENST00000543658 COX11Q9Y6N1 276 aa8.02□□□□□ -1.13
DDB1-223ENST00000543658 LYSTQ99698 3801 aa8.01□□□□□ -1.13
DDB1-223ENST00000543658 IGLV10-54A0A075B6I4 117 aa8.01□□□□□ -1.13
DDB1-223ENST00000543658 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
DDB1-223ENST00000543658 ENHOQ6UWT2 76 aa8.01□□□□□ -1.13
DDB1-223ENST00000543658 LINC00173Q6ZV60 143 aa8.01□□□□□ -1.13
DDB1-223ENST00000543658 TM2D2Q9BX73 214 aa8.01□□□□□ -1.13
DDB1-223ENST00000543658 TRAV12-1A0A0B4J245 112 aa8□□□□□ -1.13
DDB1-223ENST00000543658 KRTDAPP60985 99 aa8□□□□□ -1.13
DDB1-223ENST00000543658 ZC2HC1BQ5TFG8 222 aa8□□□□□ -1.13
DDB1-223ENST00000543658 C6orf223Q8N319 242 aa8□□□□□ -1.13
DDB1-223ENST00000543658 HIST1H2BLQ99880 126 aa8□□□□□ -1.13
DDB1-223ENST00000543658 KRTAP1-5Q9BYS1 174 aa8□□□□□ -1.13
DDB1-223ENST00000543658 CST9LQ9H4G1 147 aa8□□□□□ -1.13
DDB1-223ENST00000543658 GEMIN7Q9H840 131 aaKnown RBP8□□□□□ -1.13
DDB1-223ENST00000543658 CHTOPQ9Y3Y2 248 aaKnown RBP8□□□□□ -1.13
DDB1-223ENST00000543658 LOC105371267A0A1B0GV96 52 aa7.99□□□□□ -1.13
DDB1-223ENST00000543658 C20orf202A1L168 122 aa7.99□□□□□ -1.13
DDB1-223ENST00000543658 PRSS29PA6NIE9 313 aa7.99□□□□□ -1.13
DDB1-223ENST00000543658 XCL1P47992 114 aa7.99□□□□□ -1.13
DDB1-223ENST00000543658 UBE2D1P51668 147 aa7.99□□□□□ -1.13
DDB1-223ENST00000543658 C1orf134Q5TEV5 83 aa7.99□□□□□ -1.13
DDB1-223ENST00000543658 CHCHD10Q8WYQ3 142 aaPredicted RBP7.99□□□□□ -1.13
DDB1-223ENST00000543658 FAM104AQ969W3 186 aa7.99□□□□□ -1.13
DDB1-223ENST00000543658 HERVK_113P63121 156 aa7.98□□□□□ -1.13
DDB1-223ENST00000543658 Q6ZR54 194 aa7.98□□□□□ -1.13
DDB1-223ENST00000543658 A0A0J9YXV3 536 aa7.97□□□□□ -1.13
DDB1-223ENST00000543658 GAGE12HA6NDE8 117 aa7.97□□□□□ -1.13
DDB1-223ENST00000543658 F8VRH5 84 aa7.97□□□□□ -1.13
DDB1-223ENST00000543658 SYS1-DBNDD2H3BUS1 97 aa7.97□□□□□ -1.13
DDB1-223ENST00000543658 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
DDB1-223ENST00000543658 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
DDB1-223ENST00000543658 PET117Q6UWS5 81 aa7.97□□□□□ -1.13
DDB1-223ENST00000543658 CHAC1Q9BUX1 264 aa7.97□□□□□ -1.13
DDB1-223ENST00000543658 TINCRA0A1B0GVN0 87 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms