RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 CKS2P33552 79 aa6.69□□□□□ -1.34
NPIPB4-217ENST00000543449 CAMPP49913 170 aa6.69□□□□□ -1.34
NPIPB4-217ENST00000543449 LCE2CQ5TA81 110 aa6.69□□□□□ -1.34
NPIPB4-217ENST00000543449 ANAPC16Q96DE5 110 aa6.69□□□□□ -1.34
NPIPB4-217ENST00000543449 TMEM242Q9NWH2 141 aa6.69□□□□□ -1.34
NPIPB4-217ENST00000543449 CSDC2Q9Y534 153 aaKnown RBP6.69□□□□□ -1.34
NPIPB4-217ENST00000543449 TRBV24-1A0A075B6N3 115 aa6.68□□□□□ -1.34
NPIPB4-217ENST00000543449 GAGE12HA6NDE8 117 aa6.68□□□□□ -1.34
NPIPB4-217ENST00000543449 RPS10P46783 165 aaKnown RBP6.68□□□□□ -1.34
NPIPB4-217ENST00000543449 SS18Q15532 418 aa6.68□□□□□ -1.34
NPIPB4-217ENST00000543449 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
NPIPB4-217ENST00000543449 CHCHD10Q8WYQ3 142 aaPredicted RBP6.68□□□□□ -1.34
NPIPB4-217ENST00000543449 IGHV3-64A0A075B6Q5 118 aa6.67□□□□□ -1.34
NPIPB4-217ENST00000543449 IGKV3OR2-268A0A0C4DH90 116 aa6.67□□□□□ -1.34
NPIPB4-217ENST00000543449 MRPL51Q4U2R6 128 aaKnown RBP6.67□□□□□ -1.34
NPIPB4-217ENST00000543449 CLLU1Q5K131 121 aa6.67□□□□□ -1.34
NPIPB4-217ENST00000543449 SCXQ7RTU7 201 aa6.67□□□□□ -1.34
NPIPB4-217ENST00000543449 NRACQ8N912 160 aa6.67□□□□□ -1.34
NPIPB4-217ENST00000543449 TIMM21Q9BVV7 248 aa6.67□□□□□ -1.34
NPIPB4-217ENST00000543449 A0A1B0GXF2 115 aa6.66□□□□□ -1.34
NPIPB4-217ENST00000543449 LINC01620Q4KN68 170 aa6.66□□□□□ -1.34
NPIPB4-217ENST00000543449 MRPL54Q6P161 138 aaKnown RBP6.66□□□□□ -1.34
NPIPB4-217ENST00000543449 UQCC3Q6UW78 93 aa6.66□□□□□ -1.34
NPIPB4-217ENST00000543449 LINC00528Q8N1L1 170 aa6.66□□□□□ -1.34
NPIPB4-217ENST00000543449 ZNF664Q8N3J9 261 aa6.66□□□□□ -1.34
NPIPB4-217ENST00000543449 CDC42SE2Q9NRR3 84 aa6.66□□□□□ -1.34
NPIPB4-217ENST00000543449 LAMTOR2Q9Y2Q5 125 aa6.66□□□□□ -1.34
NPIPB4-217ENST00000543449 IGHV1-58A0A0C4DH39 117 aa6.65□□□□□ -1.34
NPIPB4-217ENST00000543449 LINC00959A0A1B0GUT2 108 aa6.65□□□□□ -1.34
NPIPB4-217ENST00000543449 C1orf196B1AJZ1 125 aa6.65□□□□□ -1.34
NPIPB4-217ENST00000543449 SMKR1H3BMG3 65 aa6.65□□□□□ -1.34
NPIPB4-217ENST00000543449 GAS8-AS1O95177 125 aa6.65□□□□□ -1.34
NPIPB4-217ENST00000543449 TNFRSF6BO95407 300 aa6.65□□□□□ -1.34
NPIPB4-217ENST00000543449 HAMPP81172 84 aa6.65□□□□□ -1.34
NPIPB4-217ENST00000543449 CD164L2Q6UWJ8 174 aa6.65□□□□□ -1.34
NPIPB4-217ENST00000543449 ORMDL3Q8N138 153 aa6.65□□□□□ -1.34
NPIPB4-217ENST00000543449 CIRBP-AS1Q8TBR5 109 aa6.65□□□□□ -1.34
NPIPB4-217ENST00000543449 HSPG2P98160 4391 aa6.65□□□□□ -1.35
NPIPB4-217ENST00000543449 GVQW2A0A096LPI5 108 aaPredicted RBP6.64□□□□□ -1.35
NPIPB4-217ENST00000543449 D6R8Y8 96 aa6.64□□□□□ -1.35
NPIPB4-217ENST00000543449 RAB5AP20339 215 aa6.64□□□□□ -1.35
NPIPB4-217ENST00000543449 FOXI1Q12951 378 aa6.64□□□□□ -1.35
NPIPB4-217ENST00000543449 SDIM1Q6ZPB5 146 aa6.64□□□□□ -1.35
NPIPB4-217ENST00000543449 SMIM2Q9BVW6 85 aa6.64□□□□□ -1.35
NPIPB4-217ENST00000543449 APOBP04114 4563 aaKnown RBP6.63□□□□□ -1.35
NPIPB4-217ENST00000543449 PCLOQ9Y6V0 5065 aa6.63□□□□□ -1.35
NPIPB4-217ENST00000543449 XCL1P47992 114 aa6.63□□□□□ -1.35
NPIPB4-217ENST00000543449 TMEM136Q6ZRR5 245 aa6.63□□□□□ -1.35
NPIPB4-217ENST00000543449 C15orf56Q8N910 161 aa6.63□□□□□ -1.35
NPIPB4-217ENST00000543449 IMMP2LQ96T52 175 aa6.63□□□□□ -1.35
NPIPB4-217ENST00000543449 SPANXA1Q9NS26 97 aa6.63□□□□□ -1.35
NPIPB4-217ENST00000543449 UBE2D4Q9Y2X8 147 aa6.63□□□□□ -1.35
NPIPB4-217ENST00000543449 ZNF561-AS1K7EIQ3 104 aa6.62□□□□□ -1.35
NPIPB4-217ENST00000543449 APOMO95445 188 aa6.62□□□□□ -1.35
NPIPB4-217ENST00000543449 MALP21145 153 aa6.62□□□□□ -1.35
NPIPB4-217ENST00000543449 CIRBPQ14011 172 aaKnown RBP6.62□□□□□ -1.35
NPIPB4-217ENST00000543449 C4orf48Q5BLP8 95 aa6.62□□□□□ -1.35
NPIPB4-217ENST00000543449 DPH3Q96FX2 82 aa6.62□□□□□ -1.35
NPIPB4-217ENST00000543449 PRELID3AQ96N28 172 aa6.62□□□□□ -1.35
NPIPB4-217ENST00000543449 CTDSP1Q9GZU7 261 aa6.62□□□□□ -1.35
NPIPB4-217ENST00000543449 LINC00474Q9P2X8 69 aa6.62□□□□□ -1.35
NPIPB4-217ENST00000543449 TRAV9-1A0A075B6T8 112 aa6.61□□□□□ -1.35
NPIPB4-217ENST00000543449 PRSS47A8MTI9 375 aa6.61□□□□□ -1.35
NPIPB4-217ENST00000543449 K7EMI3 77 aa6.61□□□□□ -1.35
NPIPB4-217ENST00000543449 COX7A2LO14548 114 aa6.61□□□□□ -1.35
NPIPB4-217ENST00000543449 G0S2P27469 103 aa6.61□□□□□ -1.35
NPIPB4-217ENST00000543449 MAP1LC3AQ9H492 121 aa6.61□□□□□ -1.35
NPIPB4-217ENST00000543449 NPYP01303 97 aa6.6□□□□□ -1.35
NPIPB4-217ENST00000543449 IFI27P40305 119 aaPredicted RBP6.6□□□□□ -1.35
NPIPB4-217ENST00000543449 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
NPIPB4-217ENST00000543449 HIGD2BQ4VC39 106 aa6.6□□□□□ -1.35
NPIPB4-217ENST00000543449 TRAV13-1A0A0B4J241 112 aa6.59□□□□□ -1.35
NPIPB4-217ENST00000543449 TMEM218A2RU14 115 aa6.59□□□□□ -1.35
NPIPB4-217ENST00000543449 F8WDY8 70 aa6.59□□□□□ -1.35
NPIPB4-217ENST00000543449 S100PP25815 95 aa6.59□□□□□ -1.35
NPIPB4-217ENST00000543449 RPL37AP61513 92 aaKnown RBP6.59□□□□□ -1.35
NPIPB4-217ENST00000543449 SEC11CQ9BY50 192 aa6.59□□□□□ -1.35
NPIPB4-217ENST00000543449 PYGO1Q9Y3Y4 419 aa6.59□□□□□ -1.35
NPIPB4-217ENST00000543449 ABCA13Q86UQ4 5058 aa6.59□□□□□ -1.35
NPIPB4-217ENST00000543449 SLPIP03973 132 aa6.58□□□□□ -1.36
NPIPB4-217ENST00000543449 NPSP0C0P6 89 aa6.58□□□□□ -1.36
NPIPB4-217ENST00000543449 COX19Q49B96 90 aa6.58□□□□□ -1.36
NPIPB4-217ENST00000543449 ORMDL2Q53FV1 153 aa6.58□□□□□ -1.36
NPIPB4-217ENST00000543449 SPACA4Q8TDM5 124 aa6.58□□□□□ -1.36
NPIPB4-217ENST00000543449 C7orf33Q8WU49 177 aa6.58□□□□□ -1.36
NPIPB4-217ENST00000543449 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
NPIPB4-217ENST00000543449 NXT2Q9NPJ8 142 aaKnown RBP6.58□□□□□ -1.36
NPIPB4-217ENST00000543449 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.58□□□□□ -1.36
NPIPB4-217ENST00000543449 SYCNQ0VAF6 134 aa6.57□□□□□ -1.36
NPIPB4-217ENST00000543449 PAPPA-AS1Q5QFB9 102 aa6.57□□□□□ -1.36
NPIPB4-217ENST00000543449 Q6ZUT4 128 aa6.57□□□□□ -1.36
NPIPB4-217ENST00000543449 Q8N8P6 123 aa6.57□□□□□ -1.36
NPIPB4-217ENST00000543449 OR10D4PQ8NGN7 298 aa6.57□□□□□ -1.36
NPIPB4-217ENST00000543449 C2orf48Q96LS8 159 aa6.57□□□□□ -1.36
NPIPB4-217ENST00000543449 PLAC8Q9NZF1 115 aa6.57□□□□□ -1.36
NPIPB4-217ENST00000543449 IGLV4-69A0A075B6H9 119 aa6.56□□□□□ -1.36
NPIPB4-217ENST00000543449 A0A087WYN8 130 aa6.56□□□□□ -1.36
NPIPB4-217ENST00000543449 TGIF2-C20orf24A0A0A6YYL0 155 aa6.56□□□□□ -1.36
NPIPB4-217ENST00000543449 LINC01549A6NIU2 74 aa6.56□□□□□ -1.36
NPIPB4-217ENST00000543449 IFITM10A6NMD0 228 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms