RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 KRTAP7-1Q8IUC3 87 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 Q8NBF4 154 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 OR10AG1Q8NH19 301 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 C2orf48Q96LS8 159 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 SEC22CQ9BRL7 303 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 ZNF471Q9BX82 626 aaPredicted RBP1.7□□□□□ -2.14
CHD4-209ENST00000542717 ZFP30Q9Y2G7 519 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 C20orf202A1L168 122 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 A6NN06 94 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 SNAI2O43623 268 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 CXorf1O96002 111 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 OR5AL1P0C617 328 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 IL7P13232 177 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 SPRR2DP22532 72 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 NKX2-5P52952 324 aaPredicted RBP1.69□□□□□ -2.14
CHD4-209ENST00000542717 SPAG11BQ08648 103 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 COTL1Q14019 142 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 LRRC37A5PQ49AS3 106 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 SPANXN1Q5VSR9 72 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 SUMO4Q6EEV6 95 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 RAB24Q969Q5 203 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 HIST1H2BAQ96A08 127 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 FMC1Q96HJ9 113 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 AP1S3Q96PC3 154 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 SMIM3Q9BZL3 60 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 NUDT15Q9NV35 164 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 HSPB11Q9Y547 144 aa1.69□□□□□ -2.14
CHD4-209ENST00000542717 MUC21A0A140T8X8 626 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 SPRR5A0A1B0GTR4 108 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 LINC00959A0A1B0GUT2 108 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 H7C423 109 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 COX7A2LO14548 114 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 NDUFA1O15239 70 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 PLA2G10O15496 165 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 LYRM1O43325 122 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 SIX6O95475 246 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 LTAP01374 205 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 MBP02144 154 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 MGPP08493 103 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 H2AFB2P0C5Z0 115 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 PET100P0DJ07 73 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 SSTP61278 116 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 UBE2G1P62253 170 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 RASL11AQ6T310 242 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 CD164L2Q6UWJ8 174 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 LYZL1Q6UWQ5 148 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 Q8N377 158 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 PPP1R1CQ8WVI7 109 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 BTF3L4Q96K17 158 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 MARVELD1Q9BSK0 173 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 NKX6-2Q9C056 277 aaPredicted RBP1.68□□□□□ -2.14
CHD4-209ENST00000542717 ACTR3CQ9C0K3 210 aaPredicted RBP1.68□□□□□ -2.14
CHD4-209ENST00000542717 SMDT1Q9H4I9 107 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 TP73-AS1Q9UF72 201 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 C22orf24Q9Y442 160 aa1.68□□□□□ -2.14
CHD4-209ENST00000542717 RPL37AP8A6NKH3 93 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 FAM74A7A6NL05 159 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 MPC2O95563 127 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 NCR2O95944 276 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 IGLV6-57P01721 117 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 APCSP02743 223 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 ZNF25P17030 456 aaPredicted RBP1.67□□□□□ -2.14
CHD4-209ENST00000542717 NTF3P20783 257 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 ATP6V0CP27449 155 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 DEFA3P59666 94 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 UBE2G2P60604 165 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 SERF2P84101 59 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 TMEM241Q24JQ0 296 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 TMEM101Q96IK0 257 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 C20orf166-AS1Q96NR2 134 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 SPRR2FQ96RM1 72 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 TCEAL7Q9BRU2 100 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 PSMG3Q9BT73 122 aaPredicted RBP1.67□□□□□ -2.14
CHD4-209ENST00000542717 NIT2Q9NQR4 276 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 MRPL35Q9NZE8 188 aaKnown RBP1.67□□□□□ -2.14
CHD4-209ENST00000542717 TNFSF18Q9UNG2 199 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 ALG5Q9Y673 324 aa1.67□□□□□ -2.14
CHD4-209ENST00000542717 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.66□□□□□ -2.14
CHD4-209ENST00000542717 CTXND1A0A1B0GTU2 59 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 FAM240BA0A1B0GVZ2 78 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 IGKV2-29A2NJV5 120 aaPredicted RBP1.66□□□□□ -2.14
CHD4-209ENST00000542717 CCDC160A6NGH7 325 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 G3V3Q6 166 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 S100A9P06702 114 aaKnown RBP1.66□□□□□ -2.14
CHD4-209ENST00000542717 TLX1NBP0CAT3 122 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 TRGC1P0CF51 173 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 CTRLP40313 264 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 AKR1C3P42330 323 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 FHITP49789 147 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 H2BFSP57053 126 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 RPL37P61927 97 aaKnown RBP1.66□□□□□ -2.14
CHD4-209ENST00000542717 PRLHP81277 87 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 ZNF726P1Q15940 193 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 C9orf129Q5T035 196 aaKnown RBP1.66□□□□□ -2.14
CHD4-209ENST00000542717 Q6ZNX1 250 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 MRPL55Q7Z7F7 128 aaKnown RBP1.66□□□□□ -2.14
CHD4-209ENST00000542717 C5orf38Q86SI9 138 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 STOML3Q8TAV4 291 aa1.66□□□□□ -2.14
CHD4-209ENST00000542717 PACRGQ96M98 296 aaPredicted RBP1.66□□□□□ -2.14
CHD4-209ENST00000542717 CCDC32Q9BV29 185 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms