RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CST9LQ9H4G1 147 aa19.24■□□□□ 0.67
CCM2-218ENST00000541586 CHTOPQ9Y3Y2 248 aaKnown RBP19.24■□□□□ 0.67
CCM2-218ENST00000541586 hDV102S1A0JD36 115 aa19.22■□□□□ 0.67
CCM2-218ENST00000541586 NPSP0C0P6 89 aa19.22■□□□□ 0.67
CCM2-218ENST00000541586 MRPL23Q16540 153 aaKnown RBP19.22■□□□□ 0.67
CCM2-218ENST00000541586 TIMM21Q9BVV7 248 aa19.22■□□□□ 0.67
CCM2-218ENST00000541586 ICOSQ9Y6W8 199 aa19.22■□□□□ 0.67
CCM2-218ENST00000541586 F8VRH5 84 aa19.22■□□□□ 0.67
CCM2-218ENST00000541586 DPM2O94777 84 aa19.22■□□□□ 0.67
CCM2-218ENST00000541586 PRO1933Q9H354 126 aa19.22■□□□□ 0.67
CCM2-218ENST00000541586 DYNC2H1Q8NCM8 4307 aaKnown RBP19.21■□□□□ 0.67
CCM2-218ENST00000541586 FGF6P10767 208 aa19.21■□□□□ 0.67
CCM2-218ENST00000541586 SPATA45Q537H7 98 aa19.21■□□□□ 0.67
CCM2-218ENST00000541586 PAPPA-AS1Q5QFB9 102 aa19.21■□□□□ 0.67
CCM2-218ENST00000541586 UBE2L6O14933 153 aa19.2■□□□□ 0.66
CCM2-218ENST00000541586 IGKCP01834 107 aa19.2■□□□□ 0.66
CCM2-218ENST00000541586 MRPL52Q86TS9 123 aaKnown RBP19.2■□□□□ 0.66
CCM2-218ENST00000541586 VCX2Q9H322 139 aa19.2■□□□□ 0.66
CCM2-218ENST00000541586 PLECQ15149 4684 aaKnown RBP19.2■□□□□ 0.66
CCM2-218ENST00000541586 H3BNG1 76 aa19.19■□□□□ 0.66
CCM2-218ENST00000541586 H7C423 109 aa19.19■□□□□ 0.66
CCM2-218ENST00000541586 Q6ZUT4 128 aa19.19■□□□□ 0.66
CCM2-218ENST00000541586 AMELXQ99217 191 aa19.19■□□□□ 0.66
CCM2-218ENST00000541586 PKIAP61925 76 aa19.18■□□□□ 0.66
CCM2-218ENST00000541586 RNASE13Q5GAN3 156 aaKnown RBP19.18■□□□□ 0.66
CCM2-218ENST00000541586 DGAT2L7PQ6IED9 249 aa19.18■□□□□ 0.66
CCM2-218ENST00000541586 PCP4L1A6NKN8 68 aa19.17■□□□□ 0.66
CCM2-218ENST00000541586 PLNP26678 52 aa19.17■□□□□ 0.66
CCM2-218ENST00000541586 MRPS36P82909 103 aaKnown RBP19.17■□□□□ 0.66
CCM2-218ENST00000541586 SH2D6Q7Z4S9 175 aa19.17■□□□□ 0.66
CCM2-218ENST00000541586 CHCHD5Q9BSY4 110 aa19.17■□□□□ 0.66
CCM2-218ENST00000541586 CSDC2Q9Y534 153 aaKnown RBP19.17■□□□□ 0.66
CCM2-218ENST00000541586 HSBP1L1C9JCN9 74 aa19.17■□□□□ 0.66
CCM2-218ENST00000541586 SMAGPQ0VAQ4 97 aa19.16■□□□□ 0.66
CCM2-218ENST00000541586 GAGE6Q13070 117 aa19.16■□□□□ 0.66
CCM2-218ENST00000541586 IGLV4-69A0A075B6H9 119 aa19.15■□□□□ 0.66
CCM2-218ENST00000541586 AMMECR1LQ6DCA0 310 aa19.15■□□□□ 0.66
CCM2-218ENST00000541586 STPG4Q8N801 248 aa19.15■□□□□ 0.66
CCM2-218ENST00000541586 TSTD3H0UI37 97 aa19.14■□□□□ 0.66
CCM2-218ENST00000541586 APLNQ9ULZ1 77 aa19.14■□□□□ 0.65
CCM2-218ENST00000541586 TENM2Q9NT68 2774 aa19.13■□□□□ 0.65
CCM2-218ENST00000541586 OR5A1Q8NGJ0 315 aa19.13■□□□□ 0.65
CCM2-218ENST00000541586 C15orf53Q8NAA6 179 aa19.12■□□□□ 0.65
CCM2-218ENST00000541586 TMEM101Q96IK0 257 aa19.11■□□□□ 0.65
CCM2-218ENST00000541586 ZNF25P17030 456 aaPredicted RBP19.11■□□□□ 0.65
CCM2-218ENST00000541586 CDC42SE2Q9NRR3 84 aa19.11■□□□□ 0.65
CCM2-218ENST00000541586 C11orf86A6NJI1 115 aa19.1■□□□□ 0.65
CCM2-218ENST00000541586 ANKRD39Q53RE8 183 aa19.1■□□□□ 0.65
CCM2-218ENST00000541586 LYSTQ99698 3801 aa19.09■□□□□ 0.65
CCM2-218ENST00000541586 TCTAP57738 103 aa19.08■□□□□ 0.65
CCM2-218ENST00000541586 C2orf88Q9BSF0 95 aa19.08■□□□□ 0.65
CCM2-218ENST00000541586 A0A0J9YXV3 536 aa19.07■□□□□ 0.64
CCM2-218ENST00000541586 IGLC3P0DOY3 106 aa19.07■□□□□ 0.64
CCM2-218ENST00000541586 NFE4Q86UQ8 179 aa19.07■□□□□ 0.64
CCM2-218ENST00000541586 IGLV4-60A0A075B6I1 120 aa19.06■□□□□ 0.64
CCM2-218ENST00000541586 LELP1Q5T871 98 aa19.06■□□□□ 0.64
CCM2-218ENST00000541586 LYPD5Q6UWN5 251 aa19.06■□□□□ 0.64
CCM2-218ENST00000541586 C14orf144Q96I85 54 aa19.06■□□□□ 0.64
CCM2-218ENST00000541586 TMEM262E9PQX1 116 aa19.05■□□□□ 0.64
CCM2-218ENST00000541586 CHAC1Q9BUX1 264 aa19.05■□□□□ 0.64
CCM2-218ENST00000541586 UBE2D1P51668 147 aa19.04■□□□□ 0.64
CCM2-218ENST00000541586 TIRAPP58753 221 aa19.03■□□□□ 0.64
CCM2-218ENST00000541586 MPV17L2Q567V2 206 aa19.03■□□□□ 0.64
CCM2-218ENST00000541586 RBX1P62877 108 aa19.03■□□□□ 0.64
CCM2-218ENST00000541586 A0A1B0GUV1 79 aa19.02■□□□□ 0.63
CCM2-218ENST00000541586 TMEM170BQ5T4T1 132 aa19.01■□□□□ 0.63
CCM2-218ENST00000541586 MIEN1Q9BRT3 115 aa19.01■□□□□ 0.63
CCM2-218ENST00000541586 IGKV2D-26A0A0A0MRZ7 120 aa19■□□□□ 0.63
CCM2-218ENST00000541586 TINCRA0A1B0GVN0 87 aa19■□□□□ 0.63
CCM2-218ENST00000541586 DDTP30046 118 aa19■□□□□ 0.63
CCM2-218ENST00000541586 TRAV13-1A0A0B4J241 112 aa18.99■□□□□ 0.63
CCM2-218ENST00000541586 ZNF22P17026 224 aaPredicted RBP18.99■□□□□ 0.63
CCM2-218ENST00000541586 NMUP48645 174 aa18.99■□□□□ 0.63
CCM2-218ENST00000541586 ESRGQ1W209 222 aa18.99■□□□□ 0.63
CCM2-218ENST00000541586 UQCR10Q9UDW1 63 aa18.99■□□□□ 0.63
CCM2-218ENST00000541586 CCL18P55774 89 aa18.97■□□□□ 0.63
CCM2-218ENST00000541586 COX8AP10176 69 aa18.97■□□□□ 0.63
CCM2-218ENST00000541586 UBE2DNLQ8IWF7 75 aa18.97■□□□□ 0.63
CCM2-218ENST00000541586 TP73-AS1Q9UF72 201 aa18.97■□□□□ 0.63
CCM2-218ENST00000541586 LINC00242Q5T6M2 205 aa18.96■□□□□ 0.63
CCM2-218ENST00000541586 FAM19A3Q7Z5A8 133 aa18.96■□□□□ 0.63
CCM2-218ENST00000541586 Q8N3U1 123 aa18.96■□□□□ 0.63
CCM2-218ENST00000541586 LY6G6CO95867 125 aa18.95■□□□□ 0.62
CCM2-218ENST00000541586 TRAV8-6A0A0B4J262 113 aa18.94■□□□□ 0.62
CCM2-218ENST00000541586 SLC25A34Q6PIV7 304 aa18.94■□□□□ 0.62
CCM2-218ENST00000541586 GEMIN7Q9H840 131 aaKnown RBP18.94■□□□□ 0.62
CCM2-218ENST00000541586 E9PLD3 99 aa18.94■□□□□ 0.62
CCM2-218ENST00000541586 PCP2Q8IVA1 136 aa18.94■□□□□ 0.62
CCM2-218ENST00000541586 IGKV3OR2-268A0A0C4DH90 116 aa18.93■□□□□ 0.62
CCM2-218ENST00000541586 HERVK_113P61574 105 aa18.93■□□□□ 0.62
CCM2-218ENST00000541586 LINC00588Q9Y4M8 146 aa18.93■□□□□ 0.62
CCM2-218ENST00000541586 TMEM223A0PJW6 202 aa18.92■□□□□ 0.62
CCM2-218ENST00000541586 COX6A2Q02221 97 aa18.92■□□□□ 0.62
CCM2-218ENST00000541586 LINC00587B1AMM8 73 aa18.91■□□□□ 0.62
CCM2-218ENST00000541586 SEC11AP67812 179 aa18.91■□□□□ 0.62
CCM2-218ENST00000541586 LINC00469Q8N7U9 141 aa18.91■□□□□ 0.62
CCM2-218ENST00000541586 HERVK_113P63121 156 aa18.91■□□□□ 0.62
CCM2-218ENST00000541586 TTTY13Q9BZ97 58 aa18.91■□□□□ 0.62
CCM2-218ENST00000541586 IGLV5-45A0A087WSX0 123 aa18.9■□□□□ 0.62
CCM2-218ENST00000541586 BOD1L2Q8IYS8 172 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms