RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 Q1T7F1 81 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 C6orf223Q8N319 242 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 MOB4Q9Y3A3 225 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 AKAP6Q13023 2319 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 USP24Q9UPU5 2620 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGHV7-81A0A0B4J1V7 117 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 TRGV3P03979 118 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 Q8N9W7 124 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 CCL19Q99731 98 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ZFAND3Q9H8U3 227 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 RBM12B-AS1Q9P1G2 102 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 SPTAN1Q13813 2472 aaKnown RBP4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 H3BTX0 84 aa4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ERC2-IT1O76042 136 aa4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 DGAT2L7PQ6IED9 249 aa4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 CD164L2Q6UWJ8 174 aa4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 S4R3C0 116 aa4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 MED13LQ71F56 2210 aa4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGKV3D-7A0A0C4DH55 119 aa4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 F8W735 103 aaPredicted RBP4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 UBE2E2Q96LR5 201 aa4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 MAP1AP78559 2803 aaPredicted RBP4.19□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGHV4-61A0A0C4DH41 118 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 TRBV27A0A0K0K1C4 114 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 OVOL2Q9BRP0 275 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ABCA1O95477 2261 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 WNK2Q9Y3S1 2297 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 MYO18BQ8IUG5 2567 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 DNAL4O96015 105 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 TRBV12-3P01733 135 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 HOXD3P31249 432 aaPredicted RBP4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 RNASE4P34096 147 aaKnown RBP4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 BLCAPP62952 87 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ZFYVE26Q68DK2 2539 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGHV4OR15-8A0A075B7B6 117 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 A0A087WW49 117 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 PRB1P04280 392 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGF1P05019 195 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 RBM3P98179 157 aaKnown RBP4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ABCA2Q9BZC7 2435 aa4.18□□□□□ -1.74
RAB3GAP1-207ENST00000539493 FBN2P35556 2912 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGHV4-30-2A0A087WSY4 118 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGKV3D-20A0A0C4DH25 116 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 F8WEM9 126 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ATP6V0E1O15342 81 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGHV3-23P01764 117 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 MED14OSP0DP75 135 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ESRGQ1W209 222 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 MRPL53Q96EL3 112 aaKnown RBP4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 UBR5O95071 2799 aaPredicted RBP4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ECSCRQ19T08 205 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 FAM229BQ4G0N7 80 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 GPHB5Q86YW7 130 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 BBC3Q96PG8 261 aaPredicted RBP4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 U3KQE9 123 aa4.17□□□□□ -1.74
RAB3GAP1-207ENST00000539493 CTSGP08311 255 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 MIFP14174 115 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 CIRBPQ14011 172 aaKnown RBP4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 BRD3OSQ6XYD6 125 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 C5orf56Q8N8D9 126 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 C11orf45Q8TAV5 145 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ZNF462Q96JM2 2506 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 POLR2KP53803 58 aaKnown RBP4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 KLK9Q2XQG4 91 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 KLK9Q9UKQ9 250 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 LINC00588Q9Y4M8 146 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 CACNA1BQ00975 2339 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 TRBV7-4A0A0J9YYF1 115 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 LYRM9A8MSI8 78 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 G3V318 75 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 C15orf32Q32M92 178 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 KLK15Q9H2R5 256 aa4.16□□□□□ -1.74
RAB3GAP1-207ENST00000539493 PRRC2AP48634 2157 aaKnown RBP4.15□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGHV4-38-2P0DP08 117 aa4.15□□□□□ -1.74
RAB3GAP1-207ENST00000539493 PHF5AQ7RTV0 110 aaKnown RBP4.15□□□□□ -1.74
RAB3GAP1-207ENST00000539493 SOCS3O14543 225 aa4.15□□□□□ -1.75
RAB3GAP1-207ENST00000539493 NDUFS5O43920 106 aa4.15□□□□□ -1.75
RAB3GAP1-207ENST00000539493 MSMBP08118 114 aa4.15□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGHV3-30-3P0DP02 117 aa4.15□□□□□ -1.75
RAB3GAP1-207ENST00000539493 APOC4P55056 127 aa4.15□□□□□ -1.75
RAB3GAP1-207ENST00000539493 UNQ9165/PRO28630Q6UXU0 137 aa4.15□□□□□ -1.75
RAB3GAP1-207ENST00000539493 SPG11Q96JI7 2443 aa4.15□□□□□ -1.75
RAB3GAP1-207ENST00000539493 TRBV6-5A0A0K0K1A5 114 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 Q6ZSV7 163 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 CENPEQ02224 2701 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGKV2-40A0A087WW87 121 aaPredicted RBP4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGHV3-35A0A0C4DH35 117 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGKV2D-40P01614 121 aaPredicted RBP4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 PRB4P10163 310 aaPredicted RBP4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 DAD1P61803 113 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 ZNF843Q8N446 348 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 RMI2Q96E14 147 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 FAM218AQ96MZ4 157 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 C11orf21Q9P2W6 132 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 TRAV23DV6A0A075B6W5 121 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 IGHV3OR16-8A0A075B7F1 116 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 M0R378 163 aa4.14□□□□□ -1.75
RAB3GAP1-207ENST00000539493 C19orf54Q5BKX5 351 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms