RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 C1orf43Q9BWL3 253 aa8.54□□□□□ -1.04
CDK2AP1-204ENST00000538446 CDC42SE2Q9NRR3 84 aa8.54□□□□□ -1.04
CDK2AP1-204ENST00000538446 PYGO1Q9Y3Y4 419 aa8.54□□□□□ -1.04
CDK2AP1-204ENST00000538446 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
CDK2AP1-204ENST00000538446 MRPS36P82909 103 aaKnown RBP8.53□□□□□ -1.04
CDK2AP1-204ENST00000538446 Q6ZRN7 208 aaPredicted RBP8.53□□□□□ -1.04
CDK2AP1-204ENST00000538446 Q6ZUT4 128 aa8.53□□□□□ -1.04
CDK2AP1-204ENST00000538446 TOMM6Q96B49 74 aa8.53□□□□□ -1.04
CDK2AP1-204ENST00000538446 CHCHD1Q96BP2 118 aaKnown RBP8.53□□□□□ -1.04
CDK2AP1-204ENST00000538446 URB1-AS1Q96HZ7 61 aa8.53□□□□□ -1.04
CDK2AP1-204ENST00000538446 TRAV8-4A0A0B4J246 113 aa8.52□□□□□ -1.05
CDK2AP1-204ENST00000538446 RNASE13Q5GAN3 156 aaKnown RBP8.52□□□□□ -1.05
CDK2AP1-204ENST00000538446 Q6ZN92 141 aa8.52□□□□□ -1.05
CDK2AP1-204ENST00000538446 LINC00336Q6ZUF6 198 aa8.52□□□□□ -1.05
CDK2AP1-204ENST00000538446 IGLV10-54A0A075B6I4 117 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 C1orf196B1AJZ1 125 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST1H2BKO60814 126 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HSBP1O75506 76 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HBDP02042 147 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST1H2BJP06899 126 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 NPSP0C0P6 89 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST1H2BOP23527 126 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST1H2BBP33778 126 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST1H2BDP58876 126 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST1H2BCP62807 126 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST2H2BEQ16778 126 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST1H2BHQ93079 126 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 SCGB3A1Q96QR1 104 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 TIMM17AQ99595 171 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 LYSTQ99698 3801 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST1H2BNQ99877 126 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 HIST1H2BMQ99879 126 aa8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 OPRPNQ99935 248 aaPredicted RBP8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 KMT2CQ8NEZ4 4911 aaKnown RBP8.51□□□□□ -1.05
CDK2AP1-204ENST00000538446 IGLV4-3A0A075B6K6 122 aa8.5□□□□□ -1.05
CDK2AP1-204ENST00000538446 PRSS29PA6NIE9 313 aa8.5□□□□□ -1.05
CDK2AP1-204ENST00000538446 IGIPA6NJ69 53 aa8.5□□□□□ -1.05
CDK2AP1-204ENST00000538446 SERF1AO75920 110 aa8.5□□□□□ -1.05
CDK2AP1-204ENST00000538446 SS18Q15532 418 aa8.5□□□□□ -1.05
CDK2AP1-204ENST00000538446 PMCHL1Q16048 86 aa8.5□□□□□ -1.05
CDK2AP1-204ENST00000538446 PAPPA-AS1Q5QFB9 102 aa8.5□□□□□ -1.05
CDK2AP1-204ENST00000538446 ERASQ7Z444 233 aa8.5□□□□□ -1.05
CDK2AP1-204ENST00000538446 TRAV13-1A0A0B4J241 112 aa8.49□□□□□ -1.05
CDK2AP1-204ENST00000538446 LINC00959A0A1B0GUT2 108 aa8.49□□□□□ -1.05
CDK2AP1-204ENST00000538446 IFITM10A6NMD0 228 aa8.49□□□□□ -1.05
CDK2AP1-204ENST00000538446 TEX43Q6ZNM6 134 aa8.49□□□□□ -1.05
CDK2AP1-204ENST00000538446 FAM104AQ969W3 186 aa8.49□□□□□ -1.05
CDK2AP1-204ENST00000538446 A0A096LNJ9 63 aa8.48□□□□□ -1.05
CDK2AP1-204ENST00000538446 CCL25O15444 150 aa8.48□□□□□ -1.05
CDK2AP1-204ENST00000538446 TNP2Q05952 138 aa8.48□□□□□ -1.05
CDK2AP1-204ENST00000538446 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
CDK2AP1-204ENST00000538446 C2orf88Q9BSF0 95 aa8.48□□□□□ -1.05
CDK2AP1-204ENST00000538446 VCX2Q9H322 139 aa8.48□□□□□ -1.05
CDK2AP1-204ENST00000538446 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.47□□□□□ -1.05
CDK2AP1-204ENST00000538446 XCL1P47992 114 aa8.47□□□□□ -1.05
CDK2AP1-204ENST00000538446 VPS13DQ5THJ4 4388 aa8.47□□□□□ -1.05
CDK2AP1-204ENST00000538446 GAGE12HA6NDE8 117 aa8.46□□□□□ -1.06
CDK2AP1-204ENST00000538446 EREGO14944 169 aa8.46□□□□□ -1.06
CDK2AP1-204ENST00000538446 ATP5LO75964 103 aa8.46□□□□□ -1.06
CDK2AP1-204ENST00000538446 LINC00310P59036 64 aa8.46□□□□□ -1.06
CDK2AP1-204ENST00000538446 PDZD11Q5EBL8 140 aa8.46□□□□□ -1.06
CDK2AP1-204ENST00000538446 KRTAP26-1Q6PEX3 210 aa8.46□□□□□ -1.06
CDK2AP1-204ENST00000538446 FAM19A2Q8N3H0 131 aa8.46□□□□□ -1.06
CDK2AP1-204ENST00000538446 AMELXQ99217 191 aa8.46□□□□□ -1.06
CDK2AP1-204ENST00000538446 DNAH1Q9P2D7 4330 aa8.46□□□□□ -1.06
CDK2AP1-204ENST00000538446 A0A087WTM6 91 aa8.45□□□□□ -1.06
CDK2AP1-204ENST00000538446 CD164L2Q6UWJ8 174 aa8.45□□□□□ -1.06
CDK2AP1-204ENST00000538446 LINC00173Q6ZV60 143 aa8.45□□□□□ -1.06
CDK2AP1-204ENST00000538446 MAPKAPK5-AS1Q8N8E1 139 aa8.45□□□□□ -1.06
CDK2AP1-204ENST00000538446 BAALCQ8WXS3 180 aa8.45□□□□□ -1.06
CDK2AP1-204ENST00000538446 LRCOL1A6NCL2 159 aa8.43□□□□□ -1.06
CDK2AP1-204ENST00000538446 LECT2O14960 151 aa8.43□□□□□ -1.06
CDK2AP1-204ENST00000538446 NUPR1O60356 82 aa8.43□□□□□ -1.06
CDK2AP1-204ENST00000538446 UBE2D1P51668 147 aa8.43□□□□□ -1.06
CDK2AP1-204ENST00000538446 NDUFA6P56556 154 aa8.43□□□□□ -1.06
CDK2AP1-204ENST00000538446 FOXI1Q12951 378 aa8.43□□□□□ -1.06
CDK2AP1-204ENST00000538446 PMVKQ15126 192 aa8.43□□□□□ -1.06
CDK2AP1-204ENST00000538446 ZC2HC1BQ5TFG8 222 aa8.43□□□□□ -1.06
CDK2AP1-204ENST00000538446 LEPROTL1O95214 131 aa8.42□□□□□ -1.06
CDK2AP1-204ENST00000538446 SEC11AP67812 179 aa8.42□□□□□ -1.06
CDK2AP1-204ENST00000538446 COA6Q5JTJ3 125 aaKnown RBP8.42□□□□□ -1.06
CDK2AP1-204ENST00000538446 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
CDK2AP1-204ENST00000538446 RYR2Q92736 4967 aa8.42□□□□□ -1.06
CDK2AP1-204ENST00000538446 KMT2AQ03164 3969 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 SACSQ9NZJ4 4579 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 USP17L23D6RBM5 183 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 COX7A2LO14548 114 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 MALP21145 153 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 WFDC2Q14508 124 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 C14orf177Q52M58 125 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 LINC00242Q5T6M2 205 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 CFAP161Q6P656 301 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 IFI27L1Q96BM0 104 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 HSPB8Q9UJY1 196 aa8.41□□□□□ -1.06
CDK2AP1-204ENST00000538446 PRSS1P07477 247 aa8.4□□□□□ -1.06
CDK2AP1-204ENST00000538446 FABP4P15090 132 aa8.4□□□□□ -1.06
CDK2AP1-204ENST00000538446 Q8N814 137 aa8.4□□□□□ -1.06
CDK2AP1-204ENST00000538446 GEMIN7Q9H840 131 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms