RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 IGKV3-7A0A075B6H7 116 aa12.92□□□□□ -0.34
TRA2A-211ENST00000538367 IGHG2P01859 326 aa12.92□□□□□ -0.34
TRA2A-211ENST00000538367 Q8N2B8 174 aa12.92□□□□□ -0.34
TRA2A-211ENST00000538367 SNRPD3P62318 126 aaKnown RBP12.91□□□□□ -0.34
TRA2A-211ENST00000538367 SOSTDC1Q6X4U4 206 aa12.91□□□□□ -0.34
TRA2A-211ENST00000538367 PIMREGQ9BSJ6 248 aa12.91□□□□□ -0.34
TRA2A-211ENST00000538367 RNASE13Q5GAN3 156 aaKnown RBP12.9□□□□□ -0.34
TRA2A-211ENST00000538367 FAM218AQ96MZ4 157 aa12.9□□□□□ -0.34
TRA2A-211ENST00000538367 MRAPQ8TCY5 172 aa12.89□□□□□ -0.35
TRA2A-211ENST00000538367 ZNF625Q96I27 306 aaPredicted RBP12.89□□□□□ -0.35
TRA2A-211ENST00000538367 LINC00467Q9BRT7 94 aa12.88□□□□□ -0.35
TRA2A-211ENST00000538367 TRAV12-2A0A075B6T6 113 aa12.88□□□□□ -0.35
TRA2A-211ENST00000538367 NDUFC2O95298 119 aa12.87□□□□□ -0.35
TRA2A-211ENST00000538367 ATP5EP2Q5VTU8 51 aa12.87□□□□□ -0.35
TRA2A-211ENST00000538367 CYSTM1Q9H1C7 97 aa12.87□□□□□ -0.35
TRA2A-211ENST00000538367 USP17L23D6RBM5 183 aa12.86□□□□□ -0.35
TRA2A-211ENST00000538367 H0YGX0 51 aa12.86□□□□□ -0.35
TRA2A-211ENST00000538367 TRAV13-1A0A0B4J241 112 aa12.86□□□□□ -0.35
TRA2A-211ENST00000538367 K7EQG2 157 aa12.86□□□□□ -0.35
TRA2A-211ENST00000538367 IGHV3-11P01762 117 aa12.86□□□□□ -0.35
TRA2A-211ENST00000538367 ZNF462Q96JM2 2506 aa12.86□□□□□ -0.35
TRA2A-211ENST00000538367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.85□□□□□ -0.35
TRA2A-211ENST00000538367 IGKV2-29A2NJV5 120 aaPredicted RBP12.85□□□□□ -0.35
TRA2A-211ENST00000538367 SMIM1B2RUZ4 78 aa12.85□□□□□ -0.35
TRA2A-211ENST00000538367 IGLV1-40P01703 118 aa12.85□□□□□ -0.35
TRA2A-211ENST00000538367 CRPP02741 224 aa12.85□□□□□ -0.35
TRA2A-211ENST00000538367 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
TRA2A-211ENST00000538367 S100A7L2Q5SY68 101 aa12.85□□□□□ -0.35
TRA2A-211ENST00000538367 A0A1W2PPR1 153 aa12.85□□□□□ -0.35
TRA2A-211ENST00000538367 SPINK13Q1W4C9 94 aa12.85□□□□□ -0.35
TRA2A-211ENST00000538367 KIR2DL5BQ8NHK3 375 aa12.85□□□□□ -0.35
TRA2A-211ENST00000538367 KMT2BQ9UMN6 2715 aaPredicted RBP12.84□□□□□ -0.35
TRA2A-211ENST00000538367 Q5XG85 94 aa12.84□□□□□ -0.35
TRA2A-211ENST00000538367 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.84□□□□□ -0.35
TRA2A-211ENST00000538367 LINC00242Q5T6M2 205 aa12.83□□□□□ -0.35
TRA2A-211ENST00000538367 LINC01561Q8N1V8 128 aa12.83□□□□□ -0.36
TRA2A-211ENST00000538367 DOPEY1Q5JWR5 2465 aa12.82□□□□□ -0.36
TRA2A-211ENST00000538367 IGHV3OR16-12A0A075B7B8 117 aa12.82□□□□□ -0.36
TRA2A-211ENST00000538367 IGHV3-53P01767 116 aa12.82□□□□□ -0.36
TRA2A-211ENST00000538367 DGAT2L7PQ6IED9 249 aa12.82□□□□□ -0.36
TRA2A-211ENST00000538367 HRNRQ86YZ3 2850 aaPredicted RBP12.82□□□□□ -0.36
TRA2A-211ENST00000538367 F5H768 121 aa12.82□□□□□ -0.36
TRA2A-211ENST00000538367 OXTP01178 125 aa12.82□□□□□ -0.36
TRA2A-211ENST00000538367 LINC00846Q9NV44 126 aa12.82□□□□□ -0.36
TRA2A-211ENST00000538367 COX6A2Q02221 97 aa12.81□□□□□ -0.36
TRA2A-211ENST00000538367 DSCR8Q96T75 97 aa12.8□□□□□ -0.36
TRA2A-211ENST00000538367 Q9HAA7 133 aa12.8□□□□□ -0.36
TRA2A-211ENST00000538367 IGKV3D-7A0A0C4DH55 119 aa12.8□□□□□ -0.36
TRA2A-211ENST00000538367 PROK1P58294 105 aa12.8□□□□□ -0.36
TRA2A-211ENST00000538367 CFHR3Q02985 330 aa12.8□□□□□ -0.36
TRA2A-211ENST00000538367 FLNCQ14315 2725 aa12.79□□□□□ -0.36
TRA2A-211ENST00000538367 A8MTW9 85 aa12.79□□□□□ -0.36
TRA2A-211ENST00000538367 LMO4P61968 165 aa12.79□□□□□ -0.36
TRA2A-211ENST00000538367 C14orf132Q9NPU4 83 aa12.79□□□□□ -0.36
TRA2A-211ENST00000538367 MYO18BQ8IUG5 2567 aa12.79□□□□□ -0.36
TRA2A-211ENST00000538367 USP9XQ93008 2570 aaPredicted RBP12.79□□□□□ -0.36
TRA2A-211ENST00000538367 IGHV3-73A0A0B4J1V6 119 aa12.79□□□□□ -0.36
TRA2A-211ENST00000538367 IGKV3-20P01619 116 aa12.79□□□□□ -0.36
TRA2A-211ENST00000538367 LRBAP50851 2863 aa12.78□□□□□ -0.36
TRA2A-211ENST00000538367 UBR5O95071 2799 aaPredicted RBP12.78□□□□□ -0.36
TRA2A-211ENST00000538367 BCE1O60756 84 aa12.77□□□□□ -0.36
TRA2A-211ENST00000538367 FAM208BQ5VWN6 2430 aa12.77□□□□□ -0.37
TRA2A-211ENST00000538367 TRBV10-3A0A0K0K1G6 114 aa12.76□□□□□ -0.37
TRA2A-211ENST00000538367 A6NDX4 124 aa12.76□□□□□ -0.37
TRA2A-211ENST00000538367 NACAE9PAV3 2078 aa12.76□□□□□ -0.37
TRA2A-211ENST00000538367 EPM2AB3EWF7 344 aa12.76□□□□□ -0.37
TRA2A-211ENST00000538367 EDN2P20800 178 aa12.76□□□□□ -0.37
TRA2A-211ENST00000538367 C4orf26Q17RF5 130 aa12.76□□□□□ -0.37
TRA2A-211ENST00000538367 A0A0U1RRA0 63 aa12.75□□□□□ -0.37
TRA2A-211ENST00000538367 Q6ZSN1 163 aa12.75□□□□□ -0.37
TRA2A-211ENST00000538367 A0A087WYN8 130 aa12.74□□□□□ -0.37
TRA2A-211ENST00000538367 CCKP06307 115 aa12.74□□□□□ -0.37
TRA2A-211ENST00000538367 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
TRA2A-211ENST00000538367 A0A087WVE0 104 aa12.74□□□□□ -0.37
TRA2A-211ENST00000538367 TMEM89A2RUT3 159 aa12.74□□□□□ -0.37
TRA2A-211ENST00000538367 RBMY1A1P0DJD3 496 aaKnown RBP12.74□□□□□ -0.37
TRA2A-211ENST00000538367 RBMY1CP0DJD4 496 aa12.74□□□□□ -0.37
TRA2A-211ENST00000538367 PSMB8P28062 276 aa12.74□□□□□ -0.37
TRA2A-211ENST00000538367 RBMY1FQ15415 496 aaKnown RBP12.74□□□□□ -0.37
TRA2A-211ENST00000538367 RS1O15537 224 aa12.73□□□□□ -0.37
TRA2A-211ENST00000538367 HRCT1Q6UXD1 115 aa12.73□□□□□ -0.37
TRA2A-211ENST00000538367 SMIM11BQ8TCY0 68 aa12.73□□□□□ -0.37
TRA2A-211ENST00000538367 SND1-IT1Q9HBX3 110 aa12.73□□□□□ -0.37
TRA2A-211ENST00000538367 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
TRA2A-211ENST00000538367 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
TRA2A-211ENST00000538367 LYPD5Q6UWN5 251 aa12.73□□□□□ -0.37
TRA2A-211ENST00000538367 SPTAN1Q13813 2472 aaKnown RBP12.72□□□□□ -0.37
TRA2A-211ENST00000538367 PLA2G2AP14555 144 aa12.72□□□□□ -0.37
TRA2A-211ENST00000538367 HOXD3P31249 432 aaPredicted RBP12.72□□□□□ -0.37
TRA2A-211ENST00000538367 FHL2Q14192 279 aa12.72□□□□□ -0.37
TRA2A-211ENST00000538367 COL12A1Q99715 3063 aa12.72□□□□□ -0.37
TRA2A-211ENST00000538367 CHD6Q8TD26 2715 aa12.71□□□□□ -0.37
TRA2A-211ENST00000538367 TACC2O95359 2948 aa12.71□□□□□ -0.37
TRA2A-211ENST00000538367 JMJD7-PLA2G4BH0Y9G9 81 aa12.71□□□□□ -0.38
TRA2A-211ENST00000538367 C9orf129Q5T035 196 aaKnown RBP12.71□□□□□ -0.38
TRA2A-211ENST00000538367 J3QKU1 62 aa12.7□□□□□ -0.38
TRA2A-211ENST00000538367 CCL19Q99731 98 aa12.7□□□□□ -0.38
TRA2A-211ENST00000538367 Q9UF83 564 aa12.7□□□□□ -0.38
TRA2A-211ENST00000538367 SERP1Q9Y6X1 66 aa12.7□□□□□ -0.38
TRA2A-211ENST00000538367 MED13LQ71F56 2210 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms