RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 GAGE12HA6NDE8 117 aa6.68□□□□□ -1.34
CSDE1-217ENST00000534699 SCO1O75880 301 aa6.68□□□□□ -1.34
CSDE1-217ENST00000534699 TSHBP01222 138 aa6.68□□□□□ -1.34
CSDE1-217ENST00000534699 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-217ENST00000534699 RPL37AP61513 92 aaKnown RBP6.68□□□□□ -1.34
CSDE1-217ENST00000534699 RPL23P62829 140 aaKnown RBP6.68□□□□□ -1.34
CSDE1-217ENST00000534699 ATP5L2Q7Z4Y8 100 aa6.68□□□□□ -1.34
CSDE1-217ENST00000534699 KIR2DL4Q99706 377 aa6.68□□□□□ -1.34
CSDE1-217ENST00000534699 PCLOQ9Y6V0 5065 aa6.68□□□□□ -1.34
CSDE1-217ENST00000534699 RPS10P46783 165 aaKnown RBP6.68□□□□□ -1.34
CSDE1-217ENST00000534699 CEBPGP53567 150 aa6.68□□□□□ -1.34
CSDE1-217ENST00000534699 Q6ZRU5 148 aa6.68□□□□□ -1.34
CSDE1-217ENST00000534699 NUP35Q8NFH5 326 aa6.68□□□□□ -1.34
CSDE1-217ENST00000534699 CHCHD10Q8WYQ3 142 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-217ENST00000534699 RPL39LQ96EH5 51 aaKnown RBP6.68□□□□□ -1.34
CSDE1-217ENST00000534699 FAM104BQ5XKR9 115 aa6.67□□□□□ -1.34
CSDE1-217ENST00000534699 CD164L2Q6UWJ8 174 aa6.67□□□□□ -1.34
CSDE1-217ENST00000534699 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
CSDE1-217ENST00000534699 J3QL48 77 aa6.67□□□□□ -1.34
CSDE1-217ENST00000534699 RNASEKQ6P5S7 137 aaKnown RBP6.67□□□□□ -1.34
CSDE1-217ENST00000534699 CDC42SE2Q9NRR3 84 aa6.67□□□□□ -1.34
CSDE1-217ENST00000534699 LAMTOR2Q9Y2Q5 125 aa6.67□□□□□ -1.34
CSDE1-217ENST00000534699 LINC00959A0A1B0GUT2 108 aa6.66□□□□□ -1.34
CSDE1-217ENST00000534699 SUMO2P61956 95 aaKnown RBP6.66□□□□□ -1.34
CSDE1-217ENST00000534699 PNRC1Q12796 327 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-217ENST00000534699 RNF151Q2KHN1 245 aa6.66□□□□□ -1.34
CSDE1-217ENST00000534699 ZNF664Q8N3J9 261 aa6.66□□□□□ -1.34
CSDE1-217ENST00000534699 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
CSDE1-217ENST00000534699 TRAV26-2A0A0B4J265 109 aa6.66□□□□□ -1.34
CSDE1-217ENST00000534699 NPSP0C0P6 89 aa6.66□□□□□ -1.34
CSDE1-217ENST00000534699 FOXI1Q12951 378 aa6.66□□□□□ -1.34
CSDE1-217ENST00000534699 SERTAD4-AS1Q5TG53 156 aa6.66□□□□□ -1.34
CSDE1-217ENST00000534699 SPACA4Q8TDM5 124 aa6.66□□□□□ -1.34
CSDE1-217ENST00000534699 PRSS47A8MTI9 375 aa6.65□□□□□ -1.34
CSDE1-217ENST00000534699 FCER1GP30273 86 aa6.65□□□□□ -1.34
CSDE1-217ENST00000534699 ODF1Q14990 250 aa6.65□□□□□ -1.34
CSDE1-217ENST00000534699 CLPSL2Q6UWE3 100 aa6.65□□□□□ -1.34
CSDE1-217ENST00000534699 NRACQ8N912 160 aa6.65□□□□□ -1.34
CSDE1-217ENST00000534699 C1orf196B1AJZ1 125 aa6.65□□□□□ -1.35
CSDE1-217ENST00000534699 APOMO95445 188 aa6.65□□□□□ -1.35
CSDE1-217ENST00000534699 MRPS36P82909 103 aaKnown RBP6.65□□□□□ -1.35
CSDE1-217ENST00000534699 C2orf48Q96LS8 159 aa6.65□□□□□ -1.35
CSDE1-217ENST00000534699 SPANXA1Q9NS26 97 aa6.65□□□□□ -1.35
CSDE1-217ENST00000534699 TMEM242Q9NWH2 141 aa6.65□□□□□ -1.35
CSDE1-217ENST00000534699 K7EMI3 77 aa6.64□□□□□ -1.35
CSDE1-217ENST00000534699 C7orf33Q8WU49 177 aa6.64□□□□□ -1.35
CSDE1-217ENST00000534699 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
CSDE1-217ENST00000534699 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-217ENST00000534699 IGKV2-29A2NJV5 120 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-217ENST00000534699 HBBP68871 147 aa6.63□□□□□ -1.35
CSDE1-217ENST00000534699 ADIRFQ15847 76 aa6.63□□□□□ -1.35
CSDE1-217ENST00000534699 AMN1Q8IY45 258 aa6.63□□□□□ -1.35
CSDE1-217ENST00000534699 LINC01561Q8N1V8 128 aa6.63□□□□□ -1.35
CSDE1-217ENST00000534699 ANAPC16Q96DE5 110 aa6.63□□□□□ -1.35
CSDE1-217ENST00000534699 A0A1B0GXF2 115 aa6.63□□□□□ -1.35
CSDE1-217ENST00000534699 MRPL51Q4U2R6 128 aaKnown RBP6.63□□□□□ -1.35
CSDE1-217ENST00000534699 G0S2P27469 103 aa6.63□□□□□ -1.35
CSDE1-217ENST00000534699 UBE2D4Q9Y2X8 147 aa6.63□□□□□ -1.35
CSDE1-217ENST00000534699 UQCC3Q6UW78 93 aa6.62□□□□□ -1.35
CSDE1-217ENST00000534699 OR10D4PQ8NGN7 298 aa6.62□□□□□ -1.35
CSDE1-217ENST00000534699 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-217ENST00000534699 PYGO1Q9Y3Y4 419 aa6.62□□□□□ -1.35
CSDE1-217ENST00000534699 SLPIP03973 132 aa6.61□□□□□ -1.35
CSDE1-217ENST00000534699 CKS2P33552 79 aa6.61□□□□□ -1.35
CSDE1-217ENST00000534699 LINC01620Q4KN68 170 aa6.61□□□□□ -1.35
CSDE1-217ENST00000534699 CARD19Q96LW7 228 aa6.61□□□□□ -1.35
CSDE1-217ENST00000534699 IMMP2LQ96T52 175 aa6.61□□□□□ -1.35
CSDE1-217ENST00000534699 SMIM2Q9BVW6 85 aa6.61□□□□□ -1.35
CSDE1-217ENST00000534699 IGLV4-69A0A075B6H9 119 aa6.61□□□□□ -1.35
CSDE1-217ENST00000534699 LINC01549A6NIU2 74 aa6.61□□□□□ -1.35
CSDE1-217ENST00000534699 ZNF561-AS1K7EIQ3 104 aa6.61□□□□□ -1.35
CSDE1-217ENST00000534699 COX7A2LO14548 114 aa6.61□□□□□ -1.35
CSDE1-217ENST00000534699 TRAV9-1A0A075B6T8 112 aa6.6□□□□□ -1.35
CSDE1-217ENST00000534699 LOC107984640A0A0U1RRK4 108 aa6.6□□□□□ -1.35
CSDE1-217ENST00000534699 HAMPP81172 84 aa6.6□□□□□ -1.35
CSDE1-217ENST00000534699 SYCNQ0VAF6 134 aa6.6□□□□□ -1.35
CSDE1-217ENST00000534699 A0A087WYN8 130 aa6.6□□□□□ -1.35
CSDE1-217ENST00000534699 TNFRSF6BO95407 300 aa6.6□□□□□ -1.35
CSDE1-217ENST00000534699 MT-ND4LP03901 98 aa6.6□□□□□ -1.35
CSDE1-217ENST00000534699 CTAG1AP78358 180 aa6.6□□□□□ -1.35
CSDE1-217ENST00000534699 LINC00518Q8N0U6 118 aa6.59□□□□□ -1.35
CSDE1-217ENST00000534699 ORMDL3Q8N138 153 aa6.59□□□□□ -1.35
CSDE1-217ENST00000534699 C9JQL5 133 aa6.58□□□□□ -1.36
CSDE1-217ENST00000534699 CAMPP49913 170 aa6.58□□□□□ -1.36
CSDE1-217ENST00000534699 APOC3P02656 99 aa6.58□□□□□ -1.36
CSDE1-217ENST00000534699 MALP21145 153 aa6.58□□□□□ -1.36
CSDE1-217ENST00000534699 XCL1P47992 114 aa6.58□□□□□ -1.36
CSDE1-217ENST00000534699 DPH3Q96FX2 82 aa6.58□□□□□ -1.36
CSDE1-217ENST00000534699 COX19Q49B96 90 aa6.57□□□□□ -1.36
CSDE1-217ENST00000534699 IGKV3OR2-268A0A0C4DH90 116 aa6.57□□□□□ -1.36
CSDE1-217ENST00000534699 TLX1NBP0CAT3 122 aa6.57□□□□□ -1.36
CSDE1-217ENST00000534699 CTDSP1Q9GZU7 261 aa6.57□□□□□ -1.36
CSDE1-217ENST00000534699 GAS8-AS1O95177 125 aa6.56□□□□□ -1.36
CSDE1-217ENST00000534699 RAB5AP20339 215 aa6.56□□□□□ -1.36
CSDE1-217ENST00000534699 MRPL35Q9NZE8 188 aaKnown RBP6.56□□□□□ -1.36
CSDE1-217ENST00000534699 S100A12P80511 92 aa6.56□□□□□ -1.36
CSDE1-217ENST00000534699 COX6A2Q02221 97 aa6.56□□□□□ -1.36
CSDE1-217ENST00000534699 HIGD2BQ4VC39 106 aa6.56□□□□□ -1.36
CSDE1-217ENST00000534699 PAPPA-AS1Q5QFB9 102 aa6.56□□□□□ -1.36
CSDE1-217ENST00000534699 C10orf91Q5T1B1 145 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms