RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 FAM223AQ8IWN6 122 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 TIMM17AQ99595 171 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 FBN2P35556 2912 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 HCFC1P51610 2035 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 SPTBN1Q01082 2364 aaKnown RBP3□□□□□ -1.93
ITGB1-219ENST00000534049 EXPH5Q8NEV8 1989 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 DOPEY2Q9Y3R5 2298 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 IGHV1-69DA0A0B4J2H0 117 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 C11orf86A6NJI1 115 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 E7EQL1 145 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 TMEM256-PLSCR3K7ERE1 68 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 NDUFA3O95167 84 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 ARMS2P0C7Q2 107 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 UBE2AP49459 152 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 CIRBPQ14011 172 aaKnown RBP2.99□□□□□ -1.93
ITGB1-219ENST00000534049 NSUN5P1Q3KNT7 163 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 ATP1A1-AS1Q5TC04 95 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 SFTA2Q6UW10 78 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 UNQ9165/PRO28630Q6UXU0 137 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 LYPD1Q8N2G4 141 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 ITLN1Q8WWA0 313 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 FAM218AQ96MZ4 157 aa2.99□□□□□ -1.93
ITGB1-219ENST00000534049 RP1L1Q8IWN7 2480 aaPredicted RBP2.98□□□□□ -1.93
ITGB1-219ENST00000534049 TDRD6O60522 2096 aaKnown RBP2.98□□□□□ -1.93
ITGB1-219ENST00000534049 A0A0J9YXY3 114 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 LOC100131303A0A0U1RQF7 123 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 COX7A2LO14548 114 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 CD28P10747 220 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 DEFA4P12838 97 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 ZNF80P51504 273 aaPredicted RBP2.98□□□□□ -1.93
ITGB1-219ENST00000534049 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 CLEC19AQ6UXS0 136 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 C7orf65Q6ZTY9 151 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 Q8IYB0 196 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 NKAPP1Q8N9T2 125 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 CCL17Q92583 94 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 DIRC1Q969H9 104 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 FAM167A-AS1Q96KT0 104 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 IMMP1LQ96LU5 166 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 CNFNQ9BYD5 112 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 LINC00474Q9P2X8 69 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 OTOGQ6ZRI0 2925 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 KIAA2026Q5HYC2 2103 aa2.98□□□□□ -1.93
ITGB1-219ENST00000534049 MDC1Q14676 2089 aaKnown RBP2.97□□□□□ -1.93
ITGB1-219ENST00000534049 ADGRG4Q8IZF6 3080 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 UTP20O75691 2785 aaKnown RBP2.97□□□□□ -1.93
ITGB1-219ENST00000534049 TRAV8-3A0A0A6YYJ7 113 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 IGKV1-6A0A0C4DH72 117 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 SRRM5B3KS81 715 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 F6UB75 175 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 F8WEM9 126 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 M0R3E3 92 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 LEPROTO15243 131 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 BAALC-AS2P0C853 105 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 MIFP14174 115 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 CD24P25063 80 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 S100A4P26447 101 aaKnown RBP2.97□□□□□ -1.93
ITGB1-219ENST00000534049 FUSP35637 526 aaKnown RBP eCLIP2.97□□□□□ -1.93
ITGB1-219ENST00000534049 PDE6HQ13956 83 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 KRTAP13-3Q3SY46 172 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 ASB16-AS1Q495Z4 193 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 C10orf113Q5VZT2 155 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 Q86TA4 180 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 FXYD5Q96DB9 178 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 TMEM141Q96I45 108 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 CCL13Q99616 98 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 CYP4F30PQ9H0H9 118 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 CXXC4Q9H2H0 198 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 PROK2Q9HC23 129 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 SPRR3Q9UBC9 169 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 PHLDA3Q9Y5J5 127 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 LRBAP50851 2863 aa2.97□□□□□ -1.93
ITGB1-219ENST00000534049 ARHGAP21Q5T5U3 1957 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 KIAA1549Q9HCM3 1950 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 CELSR1Q9NYQ6 3014 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 HIVEP3Q5T1R4 2406 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 IGLV2-18A0A075B6J9 118 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 IGHV3-38A0A0C4DH36 116 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 A8MUN3 132 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 M0R381 172 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 KIAA0087Q14695 138 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 PIGYQ3MUY2 71 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 C2orf83Q53S99 150 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 MUSTN1Q8IVN3 82 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 ZNF491Q8N8L2 437 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 OCR1Q9BZK8 76 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 TMEM14CQ9P0S9 112 aa2.96□□□□□ -1.94
ITGB1-219ENST00000534049 ANKRD17O75179 2603 aaKnown RBP2.95□□□□□ -1.94
ITGB1-219ENST00000534049 CENPEQ02224 2701 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 ITPR2Q14571 2701 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 UNC13CQ8NB66 2214 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 IGHV3-20A0A0C4DH32 117 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 IGHV5-51A0A0C4DH38 117 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 IGKV1-12A0A0C4DH73 117 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 I3L3M4 83 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 IGKV1D-12P01611 117 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 MP68P56378 58 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 DEFB109BQ30KR1 87 aa2.95□□□□□ -1.94
ITGB1-219ENST00000534049 SPANXN1Q5VSR9 72 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms