RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 RUSC1-AS1Q66K80 236 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 LTBP2Q14767 1821 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 CAMK2N2Q96S95 79 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 ESRGQ1W209 222 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 ADAMTSL4-AS1Q5T5F5 129 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 Q6ZQY7 126 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 C22orf34Q6ZV56 151 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 Q8N814 137 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 C2orf48Q96LS8 159 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 MYOFQ9NZM1 2061 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 MYO18BQ8IUG5 2567 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 ZNF73O43830 326 aaPredicted RBP2.92□□□□□ -1.94
SOX6-217ENST00000533870 C6orf223Q8N319 242 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 Q6YL49 198 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 Q9HAA7 133 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 TNCP24821 2201 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 LINC00959A0A1B0GUT2 108 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 ETDCA0A1B0GVM5 59 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 LINC00846Q9NV44 126 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 CEP295Q9C0D2 2601 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 LY6HO94772 140 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 DEFB130BP0DP73 79 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 DEFB130AP0DP74 79 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 C1orf195Q5TG92 126 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 SMIM11BQ8TCY0 68 aa2.92□□□□□ -1.94
SOX6-217ENST00000533870 DOCK3Q8IZD9 2030 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 ENHOQ6UWT2 76 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 A0A0U1RQV1 116 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 ANGP03950 147 aaKnown RBP2.91□□□□□ -1.94
SOX6-217ENST00000533870 C9orf66Q5T8R8 295 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 ZNF407Q9C0G0 2248 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 CUL9Q8IWT3 2517 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 TNRC6AQ8NDV7 1962 aaKnown RBP2.91□□□□□ -1.94
SOX6-217ENST00000533870 PLXNB3Q9ULL4 1909 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 A0A0J9YWU9 116 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 IGHV4-30-4P0DP06 118 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 Q6ZTI0 123 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 OBSCN-AS1Q96MR7 158 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 MUC6Q6W4X9 2439 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 BDP1A6H8Y1 2624 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 GYPEP15421 78 aa2.91□□□□□ -1.94
SOX6-217ENST00000533870 PRB3Q04118 309 aaPredicted RBP2.91□□□□□ -1.94
SOX6-217ENST00000533870 LINC00575Q6W349 94 aa2.9□□□□□ -1.94
SOX6-217ENST00000533870 Q8N2B8 174 aa2.9□□□□□ -1.94
SOX6-217ENST00000533870 C11orf72Q8NBR9 251 aa2.9□□□□□ -1.94
SOX6-217ENST00000533870 MYO7BQ6PIF6 2116 aa2.9□□□□□ -1.94
SOX6-217ENST00000533870 GVQW2A0A096LPI5 108 aaPredicted RBP2.9□□□□□ -1.94
SOX6-217ENST00000533870 ODF3L2Q3SX64 289 aa2.9□□□□□ -1.94
SOX6-217ENST00000533870 CHCHD10Q8WYQ3 142 aaPredicted RBP2.9□□□□□ -1.94
SOX6-217ENST00000533870 NOP10Q9NPE3 64 aaKnown RBP2.9□□□□□ -1.94
SOX6-217ENST00000533870 FAM208BQ5VWN6 2430 aa2.9□□□□□ -1.94
SOX6-217ENST00000533870 NCOR2Q9Y618 2525 aa2.9□□□□□ -1.94
SOX6-217ENST00000533870 TRAV23DV6A0A075B6W5 121 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 LINC00337Q8N6G1 96 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 IGHV4-28A0A0C4DH34 117 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 hDV103S1A0JD37 113 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 IGHV4-31P0DP07 118 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 REG3AQ06141 175 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 LELP1Q5T871 98 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 CEMP1Q6PRD7 247 aaPredicted RBP2.9□□□□□ -1.95
SOX6-217ENST00000533870 Q8N3U1 123 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 ADAMTS9Q9P2N4 1935 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 FANCMQ8IYD8 2048 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 GNLYP22749 145 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 HRCT1Q6UXD1 115 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 Q6ZVQ6 151 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 LINC01548A6NM66 108 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 Q6ZSV7 163 aa2.9□□□□□ -1.95
SOX6-217ENST00000533870 ELOF1P60002 83 aaKnown RBP2.89□□□□□ -1.95
SOX6-217ENST00000533870 RNASE13Q5GAN3 156 aaKnown RBP2.89□□□□□ -1.95
SOX6-217ENST00000533870 USP9YO00507 2555 aaPredicted RBP2.89□□□□□ -1.95
SOX6-217ENST00000533870 USP9XQ93008 2570 aaPredicted RBP2.89□□□□□ -1.95
SOX6-217ENST00000533870 DOCK11Q5JSL3 2073 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 RALGAPA1Q6GYQ0 2036 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 C14orf177Q52M58 125 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 LINC00167Q96N53 147 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 MPDZO75970 2070 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 NCOA6Q14686 2063 aaPredicted RBP2.89□□□□□ -1.95
SOX6-217ENST00000533870 MED13LQ71F56 2210 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 DOCK8Q8NF50 2099 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 LYPD5Q6UWN5 251 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 LINC00482Q8N8I6 264 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 SPATA3Q8NHX4 192 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 LIMD2Q9BT23 127 aa2.89□□□□□ -1.95
SOX6-217ENST00000533870 COL6A6A6NMZ7 2263 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 LINC01547P58512 204 aaPredicted RBP2.88□□□□□ -1.95
SOX6-217ENST00000533870 SCN5AQ14524 2016 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 DOPEY1Q5JWR5 2465 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 UBE2AP49459 152 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 Q96MF0 132 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 PRYO14603 147 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 MGAMO43451 1857 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 FHL3Q13643 280 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 ZNF702PQ9H963 129 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 ANAPC1Q9H1A4 1944 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 SYCNQ0VAF6 134 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 NOTCH3Q9UM47 2321 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 IGHV4-30-2A0A087WSY4 118 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 PLAC8L1A1L4L8 177 aa2.88□□□□□ -1.95
SOX6-217ENST00000533870 SPRY2O43597 315 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms