RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 ERASQ7Z444 233 aa14.28□□□□□ -0.12
PTP4A2-215ENST00000533408 TMEM141Q96I45 108 aa14.28□□□□□ -0.12
PTP4A2-215ENST00000533408 TRAV8-4A0A0B4J246 113 aa14.27□□□□□ -0.13
PTP4A2-215ENST00000533408 CCL25O15444 150 aa14.27□□□□□ -0.13
PTP4A2-215ENST00000533408 LINC00269Q8N2A0 174 aa14.27□□□□□ -0.13
PTP4A2-215ENST00000533408 SCGB3A1Q96QR1 104 aa14.27□□□□□ -0.13
PTP4A2-215ENST00000533408 TM2D2Q9BX73 214 aa14.27□□□□□ -0.13
PTP4A2-215ENST00000533408 CDC42SE2Q9NRR3 84 aa14.27□□□□□ -0.13
PTP4A2-215ENST00000533408 IGLV4-60A0A075B6I1 120 aa14.26□□□□□ -0.13
PTP4A2-215ENST00000533408 REG3AQ06141 175 aa14.26□□□□□ -0.13
PTP4A2-215ENST00000533408 C1orf134Q5TEV5 83 aa14.26□□□□□ -0.13
PTP4A2-215ENST00000533408 UBE2WQ96B02 151 aa14.26□□□□□ -0.13
PTP4A2-215ENST00000533408 URB1-AS1Q96HZ7 61 aa14.26□□□□□ -0.13
PTP4A2-215ENST00000533408 TIMM17AQ99595 171 aa14.26□□□□□ -0.13
PTP4A2-215ENST00000533408 PRR34Q9NV39 138 aa14.26□□□□□ -0.13
PTP4A2-215ENST00000533408 STARD9Q9P2P6 4700 aa14.25□□□□□ -0.13
PTP4A2-215ENST00000533408 SERF1AO75920 110 aa14.24□□□□□ -0.13
PTP4A2-215ENST00000533408 ATP5LO75964 103 aa14.24□□□□□ -0.13
PTP4A2-215ENST00000533408 C6orf223Q8N319 242 aa14.24□□□□□ -0.13
PTP4A2-215ENST00000533408 Q8N3U1 123 aa14.24□□□□□ -0.13
PTP4A2-215ENST00000533408 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.23□□□□□ -0.13
PTP4A2-215ENST00000533408 C2orf88Q9BSF0 95 aa14.23□□□□□ -0.13
PTP4A2-215ENST00000533408 VCX2Q9H322 139 aa14.23□□□□□ -0.13
PTP4A2-215ENST00000533408 IGIPA6NJ69 53 aa14.22□□□□□ -0.13
PTP4A2-215ENST00000533408 SS18Q15532 418 aa14.22□□□□□ -0.13
PTP4A2-215ENST00000533408 TEX43Q6ZNM6 134 aa14.22□□□□□ -0.13
PTP4A2-215ENST00000533408 C1orf43Q9BWL3 253 aa14.22□□□□□ -0.13
PTP4A2-215ENST00000533408 COA6Q5JTJ3 125 aaKnown RBP14.21□□□□□ -0.13
PTP4A2-215ENST00000533408 ENHOQ6UWT2 76 aa14.21□□□□□ -0.13
PTP4A2-215ENST00000533408 KRTAP1-5Q9BYS1 174 aa14.21□□□□□ -0.13
PTP4A2-215ENST00000533408 Q9HAA7 133 aa14.21□□□□□ -0.13
PTP4A2-215ENST00000533408 NDUFA6P56556 154 aa14.2□□□□□ -0.14
PTP4A2-215ENST00000533408 IGLV4-3A0A075B6K6 122 aa14.19□□□□□ -0.14
PTP4A2-215ENST00000533408 PSCAO43653 123 aa14.18□□□□□ -0.14
PTP4A2-215ENST00000533408 S100A6P06703 90 aa14.18□□□□□ -0.14
PTP4A2-215ENST00000533408 PMCHL1Q16048 86 aa14.18□□□□□ -0.14
PTP4A2-215ENST00000533408 PDZD11Q5EBL8 140 aa14.18□□□□□ -0.14
PTP4A2-215ENST00000533408 Q6ZUT4 128 aa14.18□□□□□ -0.14
PTP4A2-215ENST00000533408 HSPB8Q9UJY1 196 aa14.18□□□□□ -0.14
PTP4A2-215ENST00000533408 IGKV2D-24A0A075B6R9 120 aa14.17□□□□□ -0.14
PTP4A2-215ENST00000533408 IGKV3OR2-268A0A0C4DH90 116 aa14.17□□□□□ -0.14
PTP4A2-215ENST00000533408 IFITM10A6NMD0 228 aa14.17□□□□□ -0.14
PTP4A2-215ENST00000533408 CLPSL2Q6UWE3 100 aa14.17□□□□□ -0.14
PTP4A2-215ENST00000533408 A0A096LNJ9 63 aa14.16□□□□□ -0.14
PTP4A2-215ENST00000533408 LINC00959A0A1B0GUT2 108 aa14.16□□□□□ -0.14
PTP4A2-215ENST00000533408 LEPROTL1O95214 131 aa14.16□□□□□ -0.14
PTP4A2-215ENST00000533408 SEC11AP67812 179 aa14.16□□□□□ -0.14
PTP4A2-215ENST00000533408 PACRGQ96M98 296 aaPredicted RBP14.16□□□□□ -0.14
PTP4A2-215ENST00000533408 FAM19A2Q8N3H0 131 aa14.15□□□□□ -0.14
PTP4A2-215ENST00000533408 AMELXQ99217 191 aa14.15□□□□□ -0.14
PTP4A2-215ENST00000533408 OPRPNQ99935 248 aaPredicted RBP14.15□□□□□ -0.14
PTP4A2-215ENST00000533408 PLECQ15149 4684 aaKnown RBP14.15□□□□□ -0.14
PTP4A2-215ENST00000533408 TRAV13-1A0A0B4J241 112 aa14.14□□□□□ -0.15
PTP4A2-215ENST00000533408 PMVKQ15126 192 aa14.14□□□□□ -0.15
PTP4A2-215ENST00000533408 PRSS1P07477 247 aa14.13□□□□□ -0.15
PTP4A2-215ENST00000533408 LINC00310P59036 64 aa14.13□□□□□ -0.15
PTP4A2-215ENST00000533408 LINC00336Q6ZUF6 198 aa14.13□□□□□ -0.15
PTP4A2-215ENST00000533408 CHCHD10Q8WYQ3 142 aaPredicted RBP14.13□□□□□ -0.15
PTP4A2-215ENST00000533408 IFI27L1Q96BM0 104 aa14.13□□□□□ -0.15
PTP4A2-215ENST00000533408 RNASE13Q5GAN3 156 aaKnown RBP14.12□□□□□ -0.15
PTP4A2-215ENST00000533408 IGLV10-54A0A075B6I4 117 aa14.11□□□□□ -0.15
PTP4A2-215ENST00000533408 NUPR1O60356 82 aa14.11□□□□□ -0.15
PTP4A2-215ENST00000533408 CD164L2Q6UWJ8 174 aa14.11□□□□□ -0.15
PTP4A2-215ENST00000533408 FAM104AQ969W3 186 aa14.11□□□□□ -0.15
PTP4A2-215ENST00000533408 CST9LQ9H4G1 147 aa14.11□□□□□ -0.15
PTP4A2-215ENST00000533408 EREGO14944 169 aa14.1□□□□□ -0.15
PTP4A2-215ENST00000533408 BAALCQ8WXS3 180 aa14.1□□□□□ -0.15
PTP4A2-215ENST00000533408 ALMS1Q8TCU4 4167 aa14.09□□□□□ -0.15
PTP4A2-215ENST00000533408 CFAP161Q6P656 301 aa14.09□□□□□ -0.15
PTP4A2-215ENST00000533408 FABP4P15090 132 aa14.08□□□□□ -0.16
PTP4A2-215ENST00000533408 S100A2P29034 98 aa14.08□□□□□ -0.16
PTP4A2-215ENST00000533408 XCL1P47992 114 aa14.08□□□□□ -0.16
PTP4A2-215ENST00000533408 UBE2D1P51668 147 aa14.08□□□□□ -0.16
PTP4A2-215ENST00000533408 Q6ZRN7 208 aaPredicted RBP14.08□□□□□ -0.16
PTP4A2-215ENST00000533408 MAP1LC3CQ9BXW4 147 aa14.08□□□□□ -0.16
PTP4A2-215ENST00000533408 GAGE12HA6NDE8 117 aa14.07□□□□□ -0.16
PTP4A2-215ENST00000533408 HERVK_113P63121 156 aa14.07□□□□□ -0.16
PTP4A2-215ENST00000533408 LINC00173Q6ZV60 143 aa14.07□□□□□ -0.16
PTP4A2-215ENST00000533408 GEMIN7Q9H840 131 aaKnown RBP14.07□□□□□ -0.16
PTP4A2-215ENST00000533408 TRAV12-1A0A0B4J245 112 aa14.06□□□□□ -0.16
PTP4A2-215ENST00000533408 C14orf177Q52M58 125 aa14.06□□□□□ -0.16
PTP4A2-215ENST00000533408 FAM19A3Q7Z5A8 133 aa14.06□□□□□ -0.16
PTP4A2-215ENST00000533408 VPS13DQ5THJ4 4388 aa14.05□□□□□ -0.16
PTP4A2-215ENST00000533408 PRSS29PA6NIE9 313 aa14.05□□□□□ -0.16
PTP4A2-215ENST00000533408 COX7A2LO14548 114 aa14.05□□□□□ -0.16
PTP4A2-215ENST00000533408 TINCRA0A1B0GVN0 87 aa14.04□□□□□ -0.16
PTP4A2-215ENST00000533408 RTL8CO15255 209 aa14.04□□□□□ -0.16
PTP4A2-215ENST00000533408 MALP21145 153 aa14.04□□□□□ -0.16
PTP4A2-215ENST00000533408 LINC00242Q5T6M2 205 aa14.04□□□□□ -0.16
PTP4A2-215ENST00000533408 APOMO95445 188 aa14.03□□□□□ -0.16
PTP4A2-215ENST00000533408 KRTAP26-1Q6PEX3 210 aa14.03□□□□□ -0.16
PTP4A2-215ENST00000533408 FOXI1Q12951 378 aa14.02□□□□□ -0.17
PTP4A2-215ENST00000533408 CHTOPQ9Y3Y2 248 aaKnown RBP14.02□□□□□ -0.17
PTP4A2-215ENST00000533408 IGHV3OR16-9A0A0B4J2B5 98 aa14.01□□□□□ -0.17
PTP4A2-215ENST00000533408 ZC2HC1BQ5TFG8 222 aa14.01□□□□□ -0.17
PTP4A2-215ENST00000533408 LINC01561Q8N1V8 128 aa14.01□□□□□ -0.17
PTP4A2-215ENST00000533408 IGHV1-58A0A0C4DH39 117 aa13.99□□□□□ -0.17
PTP4A2-215ENST00000533408 A0A0J9YXV3 536 aa13.99□□□□□ -0.17
PTP4A2-215ENST00000533408 H3BRM9 83 aa13.99□□□□□ -0.17
PTP4A2-215ENST00000533408 IGLC3P0DOY3 106 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms