RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PPP1R2P9O14990 202 aa19.51■□□□□ 0.71
SSSCA1-207ENST00000533115 S100A8P05109 93 aa19.51■□□□□ 0.71
SSSCA1-207ENST00000533115 HBBP68871 147 aa19.51■□□□□ 0.71
SSSCA1-207ENST00000533115 C15orf56Q8N910 161 aa19.51■□□□□ 0.71
SSSCA1-207ENST00000533115 KIR2DL4Q99706 377 aa19.5■□□□□ 0.71
SSSCA1-207ENST00000533115 A0A1B0GXF2 115 aa19.49■□□□□ 0.71
SSSCA1-207ENST00000533115 SLPIP03973 132 aa19.49■□□□□ 0.71
SSSCA1-207ENST00000533115 CKS2P33552 79 aa19.49■□□□□ 0.71
SSSCA1-207ENST00000533115 SDIM1Q6ZPB5 146 aa19.49■□□□□ 0.71
SSSCA1-207ENST00000533115 CDC42SE2Q9NRR3 84 aa19.49■□□□□ 0.71
SSSCA1-207ENST00000533115 MYCBP2O75592 4640 aa19.49■□□□□ 0.71
SSSCA1-207ENST00000533115 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.48■□□□□ 0.71
SSSCA1-207ENST00000533115 F8W036 122 aa19.48■□□□□ 0.71
SSSCA1-207ENST00000533115 C20orf78Q9BR46 151 aa19.48■□□□□ 0.71
SSSCA1-207ENST00000533115 FLG2Q5D862 2391 aaPredicted RBP19.48■□□□□ 0.71
SSSCA1-207ENST00000533115 TRBV24-1A0A075B6N3 115 aa19.47■□□□□ 0.71
SSSCA1-207ENST00000533115 LINC00959A0A1B0GUT2 108 aa19.47■□□□□ 0.71
SSSCA1-207ENST00000533115 FOXI1Q12951 378 aa19.46■□□□□ 0.71
SSSCA1-207ENST00000533115 ZNF664Q8N3J9 261 aa19.46■□□□□ 0.71
SSSCA1-207ENST00000533115 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP19.45■□□□□ 0.7
SSSCA1-207ENST00000533115 IGHV3-64A0A075B6Q5 118 aa19.44■□□□□ 0.7
SSSCA1-207ENST00000533115 XCL1P47992 114 aa19.44■□□□□ 0.7
SSSCA1-207ENST00000533115 RPL32P62910 135 aaKnown RBP19.44■□□□□ 0.7
SSSCA1-207ENST00000533115 PNRC1Q12796 327 aaPredicted RBP19.44■□□□□ 0.7
SSSCA1-207ENST00000533115 D6R8Y8 96 aa19.43■□□□□ 0.7
SSSCA1-207ENST00000533115 CCL25O15444 150 aa19.43■□□□□ 0.7
SSSCA1-207ENST00000533115 TNFRSF6BO95407 300 aa19.43■□□□□ 0.7
SSSCA1-207ENST00000533115 SMAGPQ0VAQ4 97 aa19.43■□□□□ 0.7
SSSCA1-207ENST00000533115 HIGD2BQ4VC39 106 aa19.43■□□□□ 0.7
SSSCA1-207ENST00000533115 SS18Q15532 418 aa19.42■□□□□ 0.7
SSSCA1-207ENST00000533115 ATP5L2Q7Z4Y8 100 aa19.42■□□□□ 0.7
SSSCA1-207ENST00000533115 UBE2D4Q9Y2X8 147 aa19.42■□□□□ 0.7
SSSCA1-207ENST00000533115 CSDC2Q9Y534 153 aaKnown RBP19.42■□□□□ 0.7
SSSCA1-207ENST00000533115 PANO1I0J062 215 aa19.41■□□□□ 0.7
SSSCA1-207ENST00000533115 CLLU1Q5K131 121 aa19.41■□□□□ 0.7
SSSCA1-207ENST00000533115 DMBT1Q9UGM3 2413 aaPredicted RBP19.4■□□□□ 0.7
SSSCA1-207ENST00000533115 GVQW2A0A096LPI5 108 aaPredicted RBP19.39■□□□□ 0.69
SSSCA1-207ENST00000533115 TCAPO15273 167 aa19.39■□□□□ 0.69
SSSCA1-207ENST00000533115 PPBPP02775 128 aa19.39■□□□□ 0.69
SSSCA1-207ENST00000533115 TMEM18Q96B42 140 aa19.39■□□□□ 0.69
SSSCA1-207ENST00000533115 ANAPC16Q96DE5 110 aa19.39■□□□□ 0.69
SSSCA1-207ENST00000533115 MT-ND4LP03901 98 aa19.38■□□□□ 0.69
SSSCA1-207ENST00000533115 SMIM2Q9BVW6 85 aa19.38■□□□□ 0.69
SSSCA1-207ENST00000533115 PHOX2AO14813 284 aa19.37■□□□□ 0.69
SSSCA1-207ENST00000533115 NPYP01303 97 aa19.37■□□□□ 0.69
SSSCA1-207ENST00000533115 CIRBPQ14011 172 aaKnown RBP19.37■□□□□ 0.69
SSSCA1-207ENST00000533115 CD164L2Q6UWJ8 174 aa19.37■□□□□ 0.69
SSSCA1-207ENST00000533115 KRTAP10-4P60372 401 aaPredicted RBP19.36■□□□□ 0.69
SSSCA1-207ENST00000533115 TIMM21Q9BVV7 248 aa19.36■□□□□ 0.69
SSSCA1-207ENST00000533115 HERC1Q15751 4861 aa19.36■□□□□ 0.69
SSSCA1-207ENST00000533115 IGHV1-58A0A0C4DH39 117 aa19.34■□□□□ 0.69
SSSCA1-207ENST00000533115 ORMDL3Q8N138 153 aa19.34■□□□□ 0.69
SSSCA1-207ENST00000533115 C1orf196B1AJZ1 125 aa19.33■□□□□ 0.68
SSSCA1-207ENST00000533115 RNASE13Q5GAN3 156 aaKnown RBP19.33■□□□□ 0.68
SSSCA1-207ENST00000533115 TMEM136Q6ZRR5 245 aa19.33■□□□□ 0.68
SSSCA1-207ENST00000533115 CHTF8P0CG12 524 aa19.31■□□□□ 0.68
SSSCA1-207ENST00000533115 Q6ZUT4 128 aa19.31■□□□□ 0.68
SSSCA1-207ENST00000533115 DPH3Q96FX2 82 aa19.31■□□□□ 0.68
SSSCA1-207ENST00000533115 PRELID3AQ96N28 172 aa19.31■□□□□ 0.68
SSSCA1-207ENST00000533115 RPL39P62891 51 aaKnown RBP19.3■□□□□ 0.68
SSSCA1-207ENST00000533115 IFITM2Q01629 132 aa19.3■□□□□ 0.68
SSSCA1-207ENST00000533115 RPL37AP61513 92 aaKnown RBP19.29■□□□□ 0.68
SSSCA1-207ENST00000533115 COX6A2Q02221 97 aa19.29■□□□□ 0.68
SSSCA1-207ENST00000533115 SPACA4Q8TDM5 124 aa19.29■□□□□ 0.68
SSSCA1-207ENST00000533115 TRAV13-1A0A0B4J241 112 aa19.28■□□□□ 0.68
SSSCA1-207ENST00000533115 UQCC3Q6UW78 93 aa19.27■□□□□ 0.68
SSSCA1-207ENST00000533115 A0A087WYN8 130 aa19.26■□□□□ 0.67
SSSCA1-207ENST00000533115 PRSS3P2Q8NHM4 247 aa19.26■□□□□ 0.67
SSSCA1-207ENST00000533115 LINC00526Q96FQ7 95 aa19.26■□□□□ 0.67
SSSCA1-207ENST00000533115 SPANXA1Q9NS26 97 aa19.26■□□□□ 0.67
SSSCA1-207ENST00000533115 COX7A2LO14548 114 aa19.25■□□□□ 0.67
SSSCA1-207ENST00000533115 ZNF561-AS1K7EIQ3 104 aa19.24■□□□□ 0.67
SSSCA1-207ENST00000533115 RAB5AP20339 215 aa19.24■□□□□ 0.67
SSSCA1-207ENST00000533115 MALP21145 153 aa19.24■□□□□ 0.67
SSSCA1-207ENST00000533115 FAM104AQ969W3 186 aa19.24■□□□□ 0.67
SSSCA1-207ENST00000533115 LAMTOR2Q9Y2Q5 125 aa19.24■□□□□ 0.67
SSSCA1-207ENST00000533115 ADCYAP1P18509 176 aa19.23■□□□□ 0.67
SSSCA1-207ENST00000533115 TMEM218A2RU14 115 aa19.22■□□□□ 0.67
SSSCA1-207ENST00000533115 PRSS47A8MTI9 375 aa19.22■□□□□ 0.67
SSSCA1-207ENST00000533115 CARD19Q96LW7 228 aa19.22■□□□□ 0.67
SSSCA1-207ENST00000533115 MRPS36P82909 103 aaKnown RBP19.21■□□□□ 0.67
SSSCA1-207ENST00000533115 OPRPNQ99935 248 aaPredicted RBP19.21■□□□□ 0.67
SSSCA1-207ENST00000533115 J3QL48 77 aa19.2■□□□□ 0.66
SSSCA1-207ENST00000533115 IMMP2LQ96T52 175 aa19.2■□□□□ 0.66
SSSCA1-207ENST00000533115 MAP1LC3AQ9H492 121 aa19.2■□□□□ 0.66
SSSCA1-207ENST00000533115 PLAC8Q9NZF1 115 aa19.2■□□□□ 0.66
SSSCA1-207ENST00000533115 IGKV2-24A0A0C4DH68 120 aa19.19■□□□□ 0.66
SSSCA1-207ENST00000533115 LOC389332A0A1B0GUA5 103 aa19.19■□□□□ 0.66
SSSCA1-207ENST00000533115 KRTAP29-1A8MX34 341 aaPredicted RBP19.19■□□□□ 0.66
SSSCA1-207ENST00000533115 SYCNQ0VAF6 134 aa19.19■□□□□ 0.66
SSSCA1-207ENST00000533115 MAJINQ3KP22 176 aa19.19■□□□□ 0.66
SSSCA1-207ENST00000533115 C5orf38Q86SI9 138 aa19.19■□□□□ 0.66
SSSCA1-207ENST00000533115 PKHD1L1Q86WI1 4243 aa19.18■□□□□ 0.66
SSSCA1-207ENST00000533115 PKIGQ9Y2B9 76 aa19.18■□□□□ 0.66
SSSCA1-207ENST00000533115 IGLV4-69A0A075B6H9 119 aa19.16■□□□□ 0.66
SSSCA1-207ENST00000533115 A0A096LNI7 61 aa19.16■□□□□ 0.66
SSSCA1-207ENST00000533115 CTDSP1Q9GZU7 261 aa19.16■□□□□ 0.66
SSSCA1-207ENST00000533115 IFI27P40305 119 aaPredicted RBP19.15■□□□□ 0.66
SSSCA1-207ENST00000533115 PYGO1Q9Y3Y4 419 aa19.15■□□□□ 0.66
SSSCA1-207ENST00000533115 IFITM10A6NMD0 228 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms