RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 C11orf52Q96A22 123 aa7.94□□□□□ -1.14
COPB1-209ENST00000533096 CAMK2N2Q96S95 79 aa7.94□□□□□ -1.14
COPB1-209ENST00000533096 KRTAP9-2Q9BYQ4 174 aa7.94□□□□□ -1.14
COPB1-209ENST00000533096 EIF5AP63241 154 aaKnown RBP7.93□□□□□ -1.14
COPB1-209ENST00000533096 DIRC1Q969H9 104 aa7.93□□□□□ -1.14
COPB1-209ENST00000533096 MANBALQ9NQG1 85 aa7.93□□□□□ -1.14
COPB1-209ENST00000533096 KANTRA0A1W2PQU2 76 aa7.92□□□□□ -1.14
COPB1-209ENST00000533096 CTRLP40313 264 aa7.92□□□□□ -1.14
COPB1-209ENST00000533096 EIF5AL1Q6IS14 154 aaKnown RBP7.92□□□□□ -1.14
COPB1-209ENST00000533096 NUP35Q8NFH5 326 aa7.92□□□□□ -1.14
COPB1-209ENST00000533096 RNASE7Q9H1E1 156 aaKnown RBP7.92□□□□□ -1.14
COPB1-209ENST00000533096 BIN3Q9NQY0 253 aa7.92□□□□□ -1.14
COPB1-209ENST00000533096 CDC42SE2Q9NRR3 84 aa7.92□□□□□ -1.14
COPB1-209ENST00000533096 TMEM242Q9NWH2 141 aa7.92□□□□□ -1.14
COPB1-209ENST00000533096 TRBV20OR9-2A0A075B6H5 130 aa7.91□□□□□ -1.14
COPB1-209ENST00000533096 COX7A2LO14548 114 aa7.91□□□□□ -1.14
COPB1-209ENST00000533096 APOMO95445 188 aa7.91□□□□□ -1.14
COPB1-209ENST00000533096 IGLV7-43P04211 117 aa7.91□□□□□ -1.14
COPB1-209ENST00000533096 TEX261Q6UWH6 196 aa7.91□□□□□ -1.14
COPB1-209ENST00000533096 C5orf38Q86SI9 138 aa7.91□□□□□ -1.14
COPB1-209ENST00000533096 MRAP2Q96G30 205 aa7.91□□□□□ -1.14
COPB1-209ENST00000533096 RPP21Q9H633 154 aaKnown RBP7.91□□□□□ -1.14
COPB1-209ENST00000533096 ST20Q9HBF5 79 aa7.91□□□□□ -1.14
COPB1-209ENST00000533096 TSHBP01222 138 aa7.9□□□□□ -1.14
COPB1-209ENST00000533096 ESDP10768 282 aa7.9□□□□□ -1.14
COPB1-209ENST00000533096 RNASE13Q5GAN3 156 aaKnown RBP7.9□□□□□ -1.14
COPB1-209ENST00000533096 TRAV13-1A0A0B4J241 112 aa7.89□□□□□ -1.15
COPB1-209ENST00000533096 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.89□□□□□ -1.15
COPB1-209ENST00000533096 BCL2L11O43521 198 aa7.89□□□□□ -1.15
COPB1-209ENST00000533096 PDE6DO43924 150 aa7.89□□□□□ -1.15
COPB1-209ENST00000533096 MEF2BQ02080 365 aaPredicted RBP7.89□□□□□ -1.15
COPB1-209ENST00000533096 OCC1Q8TAD7 63 aa7.89□□□□□ -1.15
COPB1-209ENST00000533096 SMIM12Q96EX1 92 aa7.89□□□□□ -1.15
COPB1-209ENST00000533096 C1orf196B1AJZ1 125 aa7.88□□□□□ -1.15
COPB1-209ENST00000533096 TEX46H3BTG2 121 aa7.88□□□□□ -1.15
COPB1-209ENST00000533096 A0A0U1RQV1 116 aa7.87□□□□□ -1.15
COPB1-209ENST00000533096 FAM168BA1KXE4 195 aa7.87□□□□□ -1.15
COPB1-209ENST00000533096 H0Y9J4 135 aa7.87□□□□□ -1.15
COPB1-209ENST00000533096 UBE2D1P51668 147 aa7.87□□□□□ -1.15
COPB1-209ENST00000533096 ZNF345Q14585 488 aa7.87□□□□□ -1.15
COPB1-209ENST00000533096 KRTAP11-1Q8IUC1 163 aa7.87□□□□□ -1.15
COPB1-209ENST00000533096 CNFNQ9BYD5 112 aa7.87□□□□□ -1.15
COPB1-209ENST00000533096 TRAV1-1A0A0B4J248 108 aa7.86□□□□□ -1.15
COPB1-209ENST00000533096 GATCO43716 136 aaKnown RBP7.86□□□□□ -1.15
COPB1-209ENST00000533096 TSPAN13O95857 204 aa7.86□□□□□ -1.15
COPB1-209ENST00000533096 FCER1GP30273 86 aa7.86□□□□□ -1.15
COPB1-209ENST00000533096 MRPL52Q86TS9 123 aaKnown RBP7.86□□□□□ -1.15
COPB1-209ENST00000533096 C2orf48Q96LS8 159 aa7.86□□□□□ -1.15
COPB1-209ENST00000533096 TRBV6-5A0A0K0K1A5 114 aa7.85□□□□□ -1.15
COPB1-209ENST00000533096 C7orf77A4D0Y5 90 aa7.85□□□□□ -1.15
COPB1-209ENST00000533096 K7EN84 100 aa7.85□□□□□ -1.15
COPB1-209ENST00000533096 GAGE2EQ4V326 116 aa7.85□□□□□ -1.15
COPB1-209ENST00000533096 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
COPB1-209ENST00000533096 GAGE2DQ9UEU5 116 aa7.85□□□□□ -1.15
COPB1-209ENST00000533096 IGLV1-50A0A075B6I6 118 aa7.84□□□□□ -1.15
COPB1-209ENST00000533096 HMSDA8MTL9 139 aa7.84□□□□□ -1.15
COPB1-209ENST00000533096 POLR2KP53803 58 aaKnown RBP7.84□□□□□ -1.15
COPB1-209ENST00000533096 SPAG11BQ08648 103 aa7.84□□□□□ -1.15
COPB1-209ENST00000533096 BORCS7Q96B45 105 aa7.84□□□□□ -1.15
COPB1-209ENST00000533096 SMKR1H3BMG3 65 aa7.83□□□□□ -1.16
COPB1-209ENST00000533096 A8MWL6 223 aa7.82□□□□□ -1.16
COPB1-209ENST00000533096 VCYO14598 125 aa7.82□□□□□ -1.16
COPB1-209ENST00000533096 UBE2BP63146 152 aa7.82□□□□□ -1.16
COPB1-209ENST00000533096 C10orf25Q5T742 122 aa7.82□□□□□ -1.16
COPB1-209ENST00000533096 TSKUQ8WUA8 353 aa7.82□□□□□ -1.16
COPB1-209ENST00000533096 ORAOV1Q8WV07 137 aa7.82□□□□□ -1.16
COPB1-209ENST00000533096 IMMP2LQ96T52 175 aa7.82□□□□□ -1.16
COPB1-209ENST00000533096 TRBV27A0A0K0K1C4 114 aa7.81□□□□□ -1.16
COPB1-209ENST00000533096 KRTAP1-4P0C5Y4 121 aa7.81□□□□□ -1.16
COPB1-209ENST00000533096 RAB4AP20338 218 aa7.81□□□□□ -1.16
COPB1-209ENST00000533096 CEBPGP53567 150 aa7.81□□□□□ -1.16
COPB1-209ENST00000533096 RNF151Q2KHN1 245 aa7.81□□□□□ -1.16
COPB1-209ENST00000533096 UNQ6190/PRO20217Q6UXQ8 127 aa7.81□□□□□ -1.16
COPB1-209ENST00000533096 AMN1Q8IY45 258 aa7.81□□□□□ -1.16
COPB1-209ENST00000533096 UBE2D4Q9Y2X8 147 aa7.81□□□□□ -1.16
COPB1-209ENST00000533096 SMAGPQ0VAQ4 97 aa7.8□□□□□ -1.16
COPB1-209ENST00000533096 RGS21Q2M5E4 152 aa7.8□□□□□ -1.16
COPB1-209ENST00000533096 MUC2Q02817 5179 aa7.8□□□□□ -1.16
COPB1-209ENST00000533096 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
COPB1-209ENST00000533096 NDUFA1O15239 70 aa7.79□□□□□ -1.16
COPB1-209ENST00000533096 Q6ZUT4 128 aa7.79□□□□□ -1.16
COPB1-209ENST00000533096 FAM210AQ96ND0 272 aa7.79□□□□□ -1.16
COPB1-209ENST00000533096 TMEM191AQ9H0A3 160 aa7.79□□□□□ -1.16
COPB1-209ENST00000533096 MRPL35Q9NZE8 188 aaKnown RBP7.79□□□□□ -1.16
COPB1-209ENST00000533096 A0A1B0GUT8 65 aa7.78□□□□□ -1.16
COPB1-209ENST00000533096 RPL13AP40429 203 aaKnown RBP7.78□□□□□ -1.16
COPB1-209ENST00000533096 TMEM241Q24JQ0 296 aa7.78□□□□□ -1.16
COPB1-209ENST00000533096 OR10D4PQ8NGN7 298 aa7.78□□□□□ -1.16
COPB1-209ENST00000533096 CSDC2Q9Y534 153 aaKnown RBP7.78□□□□□ -1.16
COPB1-209ENST00000533096 M0QXV9 152 aa7.77□□□□□ -1.17
COPB1-209ENST00000533096 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
COPB1-209ENST00000533096 KIR2DL4Q99706 377 aa7.77□□□□□ -1.17
COPB1-209ENST00000533096 C6orf48Q9UBA6 75 aa7.77□□□□□ -1.17
COPB1-209ENST00000533096 HIGD1CA8MV81 97 aa7.76□□□□□ -1.17
COPB1-209ENST00000533096 SUMO2P61956 95 aaKnown RBP7.76□□□□□ -1.17
COPB1-209ENST00000533096 TMEM18Q96B42 140 aa7.76□□□□□ -1.17
COPB1-209ENST00000533096 RPL39P62891 51 aaKnown RBP7.75□□□□□ -1.17
COPB1-209ENST00000533096 FAM231DQ6ZW35 169 aa7.75□□□□□ -1.17
COPB1-209ENST00000533096 BATF3Q9NR55 127 aa7.75□□□□□ -1.17
COPB1-209ENST00000533096 TAGLN2P37802 199 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms